RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 ARHGAP35Q9NRY4 1499 aa30.83■■■□□ 2.53
LINC00943-205ENST00000539315 ATP1B4Q9UN42 357 aaPredicted RBP30.83■■■□□ 2.53
LINC00943-205ENST00000539315 POGZQ7Z3K3 1410 aa30.82■■■□□ 2.52
LINC00943-205ENST00000539315 FMN1Q68DA7 1419 aa30.81■■■□□ 2.52
LINC00943-205ENST00000539315 PLPPR3Q6T4P5 718 aa30.79■■■□□ 2.52
LINC00943-205ENST00000539315 MLECQ14165 292 aa30.78■■■□□ 2.52
LINC00943-205ENST00000539315 HSPA2P54652 639 aa30.77■■■□□ 2.52
LINC00943-205ENST00000539315 EFCAB2Q5VUJ9 269 aa30.77■■■□□ 2.52
LINC00943-205ENST00000539315 CDK11AQ9UQ88 783 aaPredicted RBP30.73■■■□□ 2.51
LINC00943-205ENST00000539315 MYO5CQ9NQX4 1742 aa30.73■■■□□ 2.51
LINC00943-205ENST00000539315 KIF14Q15058 1648 aa30.72■■■□□ 2.51
LINC00943-205ENST00000539315 ATP10AO60312 1499 aa30.71■■■□□ 2.51
LINC00943-205ENST00000539315 TROQ12816 1431 aaPredicted RBP30.69■■■□□ 2.5
LINC00943-205ENST00000539315 FER1L4A9Z1Z3 1794 aa30.69■■■□□ 2.5
LINC00943-205ENST00000539315 LRRIQ1Q96JM4 1722 aa30.66■■■□□ 2.5
LINC00943-205ENST00000539315 ARHGEF12Q9NZN5 1544 aa30.66■■■□□ 2.5
LINC00943-205ENST00000539315 C9orf84Q5VXU9 1444 aa30.65■■■□□ 2.5
LINC00943-205ENST00000539315 AFAP1Q8N556 730 aa30.65■■■□□ 2.5
LINC00943-205ENST00000539315 ARHGAP5Q13017 1502 aa30.6■■■□□ 2.49
LINC00943-205ENST00000539315 ZNF518AQ6AHZ1 1483 aa30.6■■■□□ 2.49
LINC00943-205ENST00000539315 KDM5CP41229 1560 aa30.58■■■□□ 2.49
LINC00943-205ENST00000539315 CLIP1P30622 1438 aa30.58■■■□□ 2.49
LINC00943-205ENST00000539315 CEBPAP49715 358 aaPredicted RBP30.58■■■□□ 2.49
LINC00943-205ENST00000539315 CDC42BPBQ9Y5S2 1711 aa30.55■■■□□ 2.48
LINC00943-205ENST00000539315 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
LINC00943-205ENST00000539315 DIP2CQ9Y2E4 1556 aa30.49■■■□□ 2.47
LINC00943-205ENST00000539315 CASKIN1Q8WXD9 1431 aa30.48■■■□□ 2.47
LINC00943-205ENST00000539315 TRAPPC8Q9Y2L5 1435 aa30.48■■■□□ 2.47
LINC00943-205ENST00000539315 MYT1LQ9UL68 1186 aa30.48■■■□□ 2.47
LINC00943-205ENST00000539315 SETD1BQ9UPS6 1966 aaKnown RBP30.48■■■□□ 2.47
LINC00943-205ENST00000539315 PREX1Q8TCU6 1659 aa30.47■■■□□ 2.47
LINC00943-205ENST00000539315 MLH3Q9UHC1 1453 aa30.47■■■□□ 2.47
LINC00943-205ENST00000539315 CERKQ8TCT0 537 aa30.47■■■□□ 2.47
LINC00943-205ENST00000539315 REREQ9P2R6 1566 aa30.45■■■□□ 2.46
LINC00943-205ENST00000539315 PREX2Q70Z35 1606 aa30.44■■■□□ 2.46
LINC00943-205ENST00000539315 ABCA6Q8N139 1617 aa30.44■■■□□ 2.46
LINC00943-205ENST00000539315 CCDC18Q5T9S5 1454 aa30.43■■■□□ 2.46
LINC00943-205ENST00000539315 ABCC1P33527 1531 aa30.42■■■□□ 2.46
LINC00943-205ENST00000539315 STRCQ7RTU9 1775 aa30.38■■■□□ 2.45
LINC00943-205ENST00000539315 ITSN2Q9NZM3 1697 aa30.38■■■□□ 2.45
LINC00943-205ENST00000539315 AGLP35573 1532 aa30.37■■■□□ 2.45
LINC00943-205ENST00000539315 CDC42BPAQ5VT25 1732 aa30.36■■■□□ 2.45
LINC00943-205ENST00000539315 UHRF1BP1Q6BDS2 1440 aa30.35■■■□□ 2.45
LINC00943-205ENST00000539315 KIDINS220Q9ULH0 1771 aa30.35■■■□□ 2.45
LINC00943-205ENST00000539315 C3P01024 1663 aa30.33■■■□□ 2.45
LINC00943-205ENST00000539315 FYCO1Q9BQS8 1478 aa30.31■■■□□ 2.44
LINC00943-205ENST00000539315 DMRT2Q9Y5R5 561 aa30.3■■■□□ 2.44
LINC00943-205ENST00000539315 ZNF777Q9ULD5 760 aaPredicted RBP30.28■■■□□ 2.44
LINC00943-205ENST00000539315 SAMD9LQ8IVG5 1584 aa30.27■■■□□ 2.44
LINC00943-205ENST00000539315 GPATCH8Q9UKJ3 1502 aaKnown RBP30.27■■■□□ 2.44
LINC00943-205ENST00000539315 ESF1Q9H501 851 aaKnown RBP30.25■■■□□ 2.43
LINC00943-205ENST00000539315 HNRNPMP52272 730 aaKnown RBP eCLIP30.23■■■□□ 2.43
LINC00943-205ENST00000539315 SYCP2Q9BX26 1530 aa30.21■■■□□ 2.43
LINC00943-205ENST00000539315 CNTLNQ9NXG0 1405 aa30.2■■■□□ 2.42
LINC00943-205ENST00000539315 SPAG9O60271 1321 aaKnown RBP30.2■■■□□ 2.42
LINC00943-205ENST00000539315 PTPRTO14522 1441 aa30.19■■■□□ 2.42
LINC00943-205ENST00000539315 KIAA1107Q9UPP5 1409 aa30.14■■■□□ 2.42
LINC00943-205ENST00000539315 CFDP1Q9UEE9 299 aaPredicted RBP30.14■■■□□ 2.42
LINC00943-205ENST00000539315 ZMYM3Q14202 1370 aa30.14■■■□□ 2.41
LINC00943-205ENST00000539315 SUPT6HQ7KZ85 1726 aaKnown RBP30.12■■■□□ 2.41
LINC00943-205ENST00000539315 NCOA1Q15788 1441 aa30.11■■■□□ 2.41
LINC00943-205ENST00000539315 CCNB3Q8WWL7 1395 aa30.1■■■□□ 2.41
LINC00943-205ENST00000539315 ATP7AQ04656 1500 aa30.1■■■□□ 2.41
LINC00943-205ENST00000539315 MROH2AA6NES4 1674 aa30.1■■■□□ 2.41
LINC00943-205ENST00000539315 NPATQ14207 1427 aa30.09■■■□□ 2.41
LINC00943-205ENST00000539315 PLEKHH2Q8IVE3 1493 aa30.08■■■□□ 2.41
LINC00943-205ENST00000539315 PLXNC1O60486 1568 aa30.07■■■□□ 2.4
LINC00943-205ENST00000539315 INO80Q9ULG1 1556 aaPredicted RBP30.07■■■□□ 2.4
LINC00943-205ENST00000539315 LTBP4Q8N2S1 1624 aa30.06■■■□□ 2.4
LINC00943-205ENST00000539315 A2MP01023 1474 aa30.06■■■□□ 2.4
LINC00943-205ENST00000539315 MTUS2Q5JR59 1369 aa30.05■■■□□ 2.4
LINC00943-205ENST00000539315 ZNF644Q9H582 1327 aaPredicted RBP30.04■■■□□ 2.4
LINC00943-205ENST00000539315 CAMSAP1Q5T5Y3 1602 aa30.02■■■□□ 2.4
LINC00943-205ENST00000539315 CLTCQ00610 1675 aaKnown RBP30.01■■■□□ 2.4
LINC00943-205ENST00000539315 GGT6Q6P531 493 aa30.01■■■□□ 2.39
LINC00943-205ENST00000539315 CEP162Q5TB80 1403 aa30■■■□□ 2.39
LINC00943-205ENST00000539315 NCKAP5LQ9HCH0 1330 aa29.98■■■□□ 2.39
LINC00943-205ENST00000539315 PTPRKQ15262 1439 aa29.98■■■□□ 2.39
LINC00943-205ENST00000539315 TIAM1Q13009 1591 aa29.98■■■□□ 2.39
LINC00943-205ENST00000539315 MBD5Q9P267 1494 aa29.97■■■□□ 2.39
LINC00943-205ENST00000539315 PPP6R1Q9UPN7 881 aa29.92■■■□□ 2.38
LINC00943-205ENST00000539315 ADGBQ8N7X0 1667 aa29.91■■■□□ 2.38
LINC00943-205ENST00000539315 IQSEC2Q5JU85 1478 aa29.91■■■□□ 2.38
LINC00943-205ENST00000539315 EHBP1L1Q8N3D4 1523 aa29.91■■■□□ 2.38
LINC00943-205ENST00000539315 DISP3Q9P2K9 1392 aa29.9■■■□□ 2.38
LINC00943-205ENST00000539315 MYO3AQ8NEV4 1616 aa29.9■■■□□ 2.38
LINC00943-205ENST00000539315 ILDR2Q71H61 639 aa29.9■■■□□ 2.38
LINC00943-205ENST00000539315 ZNF142P52746 1687 aaPredicted RBP29.9■■■□□ 2.38
LINC00943-205ENST00000539315 RTEL1-TNFRSF6BF6WH68 1400 aa29.88■■■□□ 2.37
LINC00943-205ENST00000539315 ZNF335Q9H4Z2 1342 aaPredicted RBP29.88■■■□□ 2.37
LINC00943-205ENST00000539315 CEP170BQ9Y4F5 1589 aaPredicted RBP29.87■■■□□ 2.37
LINC00943-205ENST00000539315 PLA2R1Q13018 1463 aa29.87■■■□□ 2.37
LINC00943-205ENST00000539315 PKD2Q13563 968 aa29.86■■■□□ 2.37
LINC00943-205ENST00000539315 DHX29Q7Z478 1369 aaKnown RBP29.86■■■□□ 2.37
LINC00943-205ENST00000539315 TCOF1Q13428 1488 aaKnown RBP29.86■■■□□ 2.37
LINC00943-205ENST00000539315 A2ML1A8K2U0 1454 aa29.77■■■□□ 2.36
LINC00943-205ENST00000539315 NCOA2Q15596 1464 aa29.77■■■□□ 2.36
LINC00943-205ENST00000539315 KIF3BO15066 747 aa29.77■■■□□ 2.36
LINC00943-205ENST00000539315 FBXO31Q5XUX0 539 aaPredicted RBP29.77■■■□□ 2.36
LINC00943-205ENST00000539315 CCDC141Q6ZP82 1450 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms