RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 KIF13AQ9H1H9 1805 aa13.1□□□□□ -0.31
LPCAT3-208ENST00000538987 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
LPCAT3-208ENST00000538987 MAP3K4Q9Y6R4 1608 aa13.1□□□□□ -0.31
LPCAT3-208ENST00000538987 TSPOAP1O95153 1857 aa13.09□□□□□ -0.31
LPCAT3-208ENST00000538987 ITGAEP38570 1179 aa13.09□□□□□ -0.31
LPCAT3-208ENST00000538987 FGD6Q6ZV73 1430 aa13.09□□□□□ -0.31
LPCAT3-208ENST00000538987 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
LPCAT3-208ENST00000538987 AKNAQ7Z591 1439 aa13.08□□□□□ -0.32
LPCAT3-208ENST00000538987 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.32
LPCAT3-208ENST00000538987 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
LPCAT3-208ENST00000538987 CDC42BPAQ5VT25 1732 aa13.07□□□□□ -0.32
LPCAT3-208ENST00000538987 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
LPCAT3-208ENST00000538987 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
LPCAT3-208ENST00000538987 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
LPCAT3-208ENST00000538987 NEO1Q92859 1461 aa13.05□□□□□ -0.32
LPCAT3-208ENST00000538987 ARAP3Q8WWN8 1544 aa13.05□□□□□ -0.32
LPCAT3-208ENST00000538987 TSPY4P0CV99 314 aa13.05□□□□□ -0.32
LPCAT3-208ENST00000538987 TSPY10P0CW01 314 aa13.05□□□□□ -0.32
LPCAT3-208ENST00000538987 ADGRL1O94910 1474 aa13.04□□□□□ -0.32
LPCAT3-208ENST00000538987 RAPGEF3O95398 923 aa13.04□□□□□ -0.32
LPCAT3-208ENST00000538987 RSPH4AQ5TD94 716 aa13.04□□□□□ -0.32
LPCAT3-208ENST00000538987 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
LPCAT3-208ENST00000538987 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
LPCAT3-208ENST00000538987 PTPN23Q9H3S7 1636 aa13.03□□□□□ -0.32
LPCAT3-208ENST00000538987 TRIM26Q12899 539 aaPredicted RBP13.03□□□□□ -0.32
LPCAT3-208ENST00000538987 AFAP1Q8N556 730 aa13.03□□□□□ -0.32
LPCAT3-208ENST00000538987 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
LPCAT3-208ENST00000538987 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
LPCAT3-208ENST00000538987 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
LPCAT3-208ENST00000538987 KIAA1107Q9UPP5 1409 aa13.01□□□□□ -0.33
LPCAT3-208ENST00000538987 DENND4BO75064 1496 aaPredicted RBP13.01□□□□□ -0.33
LPCAT3-208ENST00000538987 SAMD9LQ8IVG5 1584 aa13.01□□□□□ -0.33
LPCAT3-208ENST00000538987 TCOF1Q13428 1488 aaKnown RBP13□□□□□ -0.33
LPCAT3-208ENST00000538987 PPRC1Q5VV67 1664 aaKnown RBP12.99□□□□□ -0.33
LPCAT3-208ENST00000538987 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
LPCAT3-208ENST00000538987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.99□□□□□ -0.33
LPCAT3-208ENST00000538987 SPAG9O60271 1321 aaKnown RBP12.99□□□□□ -0.33
LPCAT3-208ENST00000538987 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
LPCAT3-208ENST00000538987 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
LPCAT3-208ENST00000538987 ABCC1P33527 1531 aa12.98□□□□□ -0.33
LPCAT3-208ENST00000538987 AEBP2Q6ZN18 517 aaPredicted RBP12.97□□□□□ -0.33
LPCAT3-208ENST00000538987 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
LPCAT3-208ENST00000538987 MBD5Q9P267 1494 aa12.97□□□□□ -0.33
LPCAT3-208ENST00000538987 ZNF518AQ6AHZ1 1483 aa12.96□□□□□ -0.34
LPCAT3-208ENST00000538987 ABCC5O15440 1437 aa12.96□□□□□ -0.34
LPCAT3-208ENST00000538987 DAPK1P53355 1430 aa12.96□□□□□ -0.34
LPCAT3-208ENST00000538987 COL17A1Q9UMD9 1497 aaPredicted RBP12.95□□□□□ -0.34
LPCAT3-208ENST00000538987 POGZQ7Z3K3 1410 aa12.95□□□□□ -0.34
LPCAT3-208ENST00000538987 PCGF6Q9BYE7 350 aa12.94□□□□□ -0.34
LPCAT3-208ENST00000538987 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
LPCAT3-208ENST00000538987 KDM6BO15054 1643 aa12.94□□□□□ -0.34
LPCAT3-208ENST00000538987 ARHGEF5Q12774 1597 aa12.92□□□□□ -0.34
LPCAT3-208ENST00000538987 C9orf84Q5VXU9 1444 aa12.92□□□□□ -0.34
LPCAT3-208ENST00000538987 ANKRD30AQ9BXX3 1397 aa12.91□□□□□ -0.34
LPCAT3-208ENST00000538987 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
LPCAT3-208ENST00000538987 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
LPCAT3-208ENST00000538987 RTEL1-TNFRSF6BF6WH68 1400 aa12.88□□□□□ -0.35
LPCAT3-208ENST00000538987 MLH3Q9UHC1 1453 aa12.88□□□□□ -0.35
LPCAT3-208ENST00000538987 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
LPCAT3-208ENST00000538987 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
LPCAT3-208ENST00000538987 MAGI2Q86UL8 1455 aa12.86□□□□□ -0.35
LPCAT3-208ENST00000538987 RICTORQ6R327 1708 aa12.86□□□□□ -0.35
LPCAT3-208ENST00000538987 ATP7AQ04656 1500 aa12.86□□□□□ -0.35
LPCAT3-208ENST00000538987 NCOA1Q15788 1441 aa12.86□□□□□ -0.35
LPCAT3-208ENST00000538987 YEATS2Q9ULM3 1422 aa12.86□□□□□ -0.35
LPCAT3-208ENST00000538987 KDM5CP41229 1560 aa12.86□□□□□ -0.35
LPCAT3-208ENST00000538987 FRMPD1Q5SYB0 1578 aa12.86□□□□□ -0.35
LPCAT3-208ENST00000538987 ROCK1Q13464 1354 aa12.85□□□□□ -0.35
LPCAT3-208ENST00000538987 KIF15Q9NS87 1388 aa12.85□□□□□ -0.35
LPCAT3-208ENST00000538987 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
LPCAT3-208ENST00000538987 HECW2Q9P2P5 1572 aa12.85□□□□□ -0.35
LPCAT3-208ENST00000538987 MAST1Q9Y2H9 1570 aa12.84□□□□□ -0.35
LPCAT3-208ENST00000538987 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.35
LPCAT3-208ENST00000538987 ATP10AO60312 1499 aa12.83□□□□□ -0.36
LPCAT3-208ENST00000538987 CROCC2H7BZ55 1655 aa12.83□□□□□ -0.36
LPCAT3-208ENST00000538987 DHX29Q7Z478 1369 aaKnown RBP12.82□□□□□ -0.36
LPCAT3-208ENST00000538987 KIF3BO15066 747 aa12.82□□□□□ -0.36
LPCAT3-208ENST00000538987 ADGRL2O95490 1459 aa12.82□□□□□ -0.36
LPCAT3-208ENST00000538987 INO80Q9ULG1 1556 aaPredicted RBP12.81□□□□□ -0.36
LPCAT3-208ENST00000538987 A2MP01023 1474 aa12.81□□□□□ -0.36
LPCAT3-208ENST00000538987 MLECQ14165 292 aa12.81□□□□□ -0.36
LPCAT3-208ENST00000538987 GGT6Q6P531 493 aa12.81□□□□□ -0.36
LPCAT3-208ENST00000538987 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
LPCAT3-208ENST00000538987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
LPCAT3-208ENST00000538987 KIDINS220Q9ULH0 1771 aa12.81□□□□□ -0.36
LPCAT3-208ENST00000538987 SETD5Q9C0A6 1442 aa12.8□□□□□ -0.36
LPCAT3-208ENST00000538987 ANKRD50Q9ULJ7 1429 aa12.8□□□□□ -0.36
LPCAT3-208ENST00000538987 NAIPQ13075 1403 aa12.79□□□□□ -0.36
LPCAT3-208ENST00000538987 DUOX2Q9NRD8 1548 aa12.79□□□□□ -0.36
LPCAT3-208ENST00000538987 ADGBQ8N7X0 1667 aa12.79□□□□□ -0.36
LPCAT3-208ENST00000538987 HFM1A2PYH4 1435 aa12.79□□□□□ -0.36
LPCAT3-208ENST00000538987 DIP2CQ9Y2E4 1556 aa12.78□□□□□ -0.36
LPCAT3-208ENST00000538987 ABCA6Q8N139 1617 aa12.78□□□□□ -0.36
LPCAT3-208ENST00000538987 PLXNC1O60486 1568 aa12.77□□□□□ -0.36
LPCAT3-208ENST00000538987 ESF1Q9H501 851 aaKnown RBP12.77□□□□□ -0.37
LPCAT3-208ENST00000538987 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
LPCAT3-208ENST00000538987 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
LPCAT3-208ENST00000538987 ARHGEF40Q8TER5 1519 aa12.76□□□□□ -0.37
LPCAT3-208ENST00000538987 KANK1Q14678 1352 aa12.74□□□□□ -0.37
LPCAT3-208ENST00000538987 ACIN1Q9UKV3 1341 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms