RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-222	ENST00000538689	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.51	□□□□□ -0.73	3e-30	■■□□□ 11.7
FDFT1-222	ENST00000538689	NCOA2	Q15596	1464 aa		10.49	□□□□□ -0.73
FDFT1-222	ENST00000538689	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.49	□□□□□ -0.73
FDFT1-222	ENST00000538689	MAGI3	Q5TCQ9	1506 aa		10.49	□□□□□ -0.73
FDFT1-222	ENST00000538689	RAPGEF6	Q8TEU7	1601 aa		10.49	□□□□□ -0.73
FDFT1-222	ENST00000538689	NUP153	P49790	1475 aa	Known RBP	10.48	□□□□□ -0.73
FDFT1-222	ENST00000538689	FGD6	Q6ZV73	1430 aa		10.48	□□□□□ -0.73
FDFT1-222	ENST00000538689	CDK13	Q14004	1512 aa	Known RBP	10.48	□□□□□ -0.73
FDFT1-222	ENST00000538689	ABCA8	O94911	1581 aa		10.48	□□□□□ -0.73
FDFT1-222	ENST00000538689	FAM50A	Q14320	339 aa	Known RBP	10.47	□□□□□ -0.73
FDFT1-222	ENST00000538689	MYOM3	Q5VTT5	1437 aa		10.47	□□□□□ -0.73
FDFT1-222	ENST00000538689	ARID3C	A6NKF2	412 aa		10.47	□□□□□ -0.73
FDFT1-222	ENST00000538689	UACA	Q9BZF9	1416 aa		10.47	□□□□□ -0.73
FDFT1-222	ENST00000538689	ITGAE	P38570	1179 aa		10.46	□□□□□ -0.73
FDFT1-222	ENST00000538689	ABCC2	Q92887	1545 aa		10.45	□□□□□ -0.74
FDFT1-222	ENST00000538689	FBXO3	Q9UK99	471 aa		10.45	□□□□□ -0.74
FDFT1-222	ENST00000538689	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.44	□□□□□ -0.74
FDFT1-222	ENST00000538689	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.44	□□□□□ -0.74
FDFT1-222	ENST00000538689	CLSPN	Q9HAW4	1339 aa		10.44	□□□□□ -0.74
FDFT1-222	ENST00000538689	UHRF1BP1L	A0JNW5	1464 aa		10.43	□□□□□ -0.74
FDFT1-222	ENST00000538689	DHX57	Q6P158	1386 aa	Known RBP	10.43	□□□□□ -0.74
FDFT1-222	ENST00000538689	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.43	□□□□□ -0.74
FDFT1-222	ENST00000538689	SETD5	Q9C0A6	1442 aa		10.42	□□□□□ -0.74
FDFT1-222	ENST00000538689	KDM5B	Q9UGL1	1544 aa		10.41	□□□□□ -0.74
FDFT1-222	ENST00000538689	RAB3GAP2	Q9H2M9	1393 aa		10.41	□□□□□ -0.74
FDFT1-222	ENST00000538689	MIA2	Q96PC5	1412 aa		10.41	□□□□□ -0.74
FDFT1-222	ENST00000538689	PKD2	Q13563	968 aa		10.4	□□□□□ -0.74
FDFT1-222	ENST00000538689	GTF3C3	Q9Y5Q9	886 aa		10.4	□□□□□ -0.74
FDFT1-222	ENST00000538689	ATP10B	O94823	1461 aa		10.4	□□□□□ -0.74
FDFT1-222	ENST00000538689	TCOF1	Q13428	1488 aa	Known RBP	10.4	□□□□□ -0.74
FDFT1-222	ENST00000538689	PTPN23	Q9H3S7	1636 aa		10.4	□□□□□ -0.74
FDFT1-222	ENST00000538689	TRO	Q12816	1431 aa	Predicted RBP	10.39	□□□□□ -0.75
FDFT1-222	ENST00000538689	VASP	P50552	380 aa	Predicted RBP	10.38	□□□□□ -0.75
FDFT1-222	ENST00000538689	PTPRK	Q15262	1439 aa		10.37	□□□□□ -0.75
FDFT1-222	ENST00000538689	HOXD11	P31277	338 aa	Predicted RBP	10.37	□□□□□ -0.75
FDFT1-222	ENST00000538689	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.37	□□□□□ -0.75
FDFT1-222	ENST00000538689	ASXL2	Q76L83	1435 aa		10.36	□□□□□ -0.75
FDFT1-222	ENST00000538689	MAPKBP1	O60336	1514 aa		10.36	□□□□□ -0.75
FDFT1-222	ENST00000538689	KIF13A	Q9H1H9	1805 aa		10.36	□□□□□ -0.75
FDFT1-222	ENST00000538689	NPM1	P06748	294 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
FDFT1-222	ENST00000538689	HFM1	A2PYH4	1435 aa		10.36	□□□□□ -0.75
FDFT1-222	ENST00000538689	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.36	□□□□□ -0.75
FDFT1-222	ENST00000538689	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.36	□□□□□ -0.75
FDFT1-222	ENST00000538689	CFAP44	Q96MT7	982 aa		10.35	□□□□□ -0.75
FDFT1-222	ENST00000538689	PLEKHD1	A6NEE1	506 aa		10.35	□□□□□ -0.75
FDFT1-222	ENST00000538689	DIP2B	Q9P265	1576 aa		10.33	□□□□□ -0.76
FDFT1-222	ENST00000538689	TRH	P20396	242 aa	Predicted RBP	10.32	□□□□□ -0.76
FDFT1-222	ENST00000538689	KIF14	Q15058	1648 aa		10.32	□□□□□ -0.76
FDFT1-222	ENST00000538689	NAIP	Q13075	1403 aa		10.32	□□□□□ -0.76
FDFT1-222	ENST00000538689	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.32	□□□□□ -0.76
FDFT1-222	ENST00000538689	WDR7	Q9Y4E6	1490 aa		10.31	□□□□□ -0.76
FDFT1-222	ENST00000538689	KCNH8	Q96L42	1107 aa		10.31	□□□□□ -0.76
FDFT1-222	ENST00000538689	ITSN2	Q9NZM3	1697 aa		10.31	□□□□□ -0.76
FDFT1-222	ENST00000538689	AKNA	Q7Z591	1439 aa		10.31	□□□□□ -0.76
FDFT1-222	ENST00000538689	ABCC10	Q5T3U5	1492 aa		10.31	□□□□□ -0.76
FDFT1-222	ENST00000538689	BBX	Q8WY36	941 aa	Predicted RBP	10.3	□□□□□ -0.76
FDFT1-222	ENST00000538689	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.3	□□□□□ -0.76
FDFT1-222	ENST00000538689	TSPOAP1	O95153	1857 aa		10.3	□□□□□ -0.76
FDFT1-222	ENST00000538689	FAM69C	Q0P6D2	419 aa		10.3	□□□□□ -0.76
FDFT1-222	ENST00000538689	DNMT1	P26358	1616 aa	Known RBP	10.29	□□□□□ -0.76
FDFT1-222	ENST00000538689	DAPK1	P53355	1430 aa		10.28	□□□□□ -0.76
FDFT1-222	ENST00000538689	ZNF644	Q9H582	1327 aa	Predicted RBP	10.28	□□□□□ -0.76
FDFT1-222	ENST00000538689	HOMEZ	Q8IX15	550 aa		10.28	□□□□□ -0.76
FDFT1-222	ENST00000538689	ROCK1	Q13464	1354 aa		10.28	□□□□□ -0.76
FDFT1-222	ENST00000538689	ABCC5	O15440	1437 aa		10.27	□□□□□ -0.76
FDFT1-222	ENST00000538689	CHIC2	Q9UKJ5	165 aa		10.27	□□□□□ -0.76
FDFT1-222	ENST00000538689	CAMSAP2	Q08AD1	1489 aa		10.27	□□□□□ -0.77
FDFT1-222	ENST00000538689	CDC42BPA	Q5VT25	1732 aa		10.27	□□□□□ -0.77
FDFT1-222	ENST00000538689	GCC2	Q8IWJ2	1684 aa		10.27	□□□□□ -0.77
FDFT1-222	ENST00000538689	PPRC1	Q5VV67	1664 aa	Known RBP	10.26	□□□□□ -0.77
FDFT1-222	ENST00000538689	RRP7BP	Q9NSQ0	103 aa		10.26	□□□□□ -0.77
FDFT1-222	ENST00000538689	TTC37	Q6PGP7	1564 aa		10.26	□□□□□ -0.77
FDFT1-222	ENST00000538689	MAP3K4	Q9Y6R4	1608 aa		10.25	□□□□□ -0.77
FDFT1-222	ENST00000538689	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.25	□□□□□ -0.77	2e-6	■□□□□ 10
FDFT1-222	ENST00000538689	TSHZ2	Q9NRE2	1034 aa		10.25	□□□□□ -0.77
FDFT1-222	ENST00000538689	GLI2	P10070	1586 aa		10.25	□□□□□ -0.77
FDFT1-222	ENST00000538689	ABCA9	Q8IUA7	1624 aa		10.24	□□□□□ -0.77
FDFT1-222	ENST00000538689	ACIN1	Q9UKV3	1341 aa	Known RBP	10.24	□□□□□ -0.77
FDFT1-222	ENST00000538689	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.23	□□□□□ -0.77
FDFT1-222	ENST00000538689	SPDYE4	A6NLX3	237 aa		10.23	□□□□□ -0.77
FDFT1-222	ENST00000538689	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.23	□□□□□ -0.77
FDFT1-222	ENST00000538689	NBR1	Q14596	966 aa		10.22	□□□□□ -0.77
FDFT1-222	ENST00000538689	NCOA1	Q15788	1441 aa		10.21	□□□□□ -0.77
FDFT1-222	ENST00000538689	CD109	Q6YHK3	1445 aa		10.21	□□□□□ -0.78
FDFT1-222	ENST00000538689	CROCC2	H7BZ55	1655 aa		10.21	□□□□□ -0.78
FDFT1-222	ENST00000538689	ADGRL2	O95490	1459 aa		10.21	□□□□□ -0.78
FDFT1-222	ENST00000538689	KDM6B	O15054	1643 aa		10.21	□□□□□ -0.78
FDFT1-222	ENST00000538689	PREX2	Q70Z35	1606 aa		10.21	□□□□□ -0.78
FDFT1-222	ENST00000538689	CDC42BPB	Q9Y5S2	1711 aa		10.2	□□□□□ -0.78
FDFT1-222	ENST00000538689	TMEM132A	Q24JP5	1023 aa		10.2	□□□□□ -0.78
FDFT1-222	ENST00000538689	DMRT2	Q9Y5R5	561 aa		10.2	□□□□□ -0.78
FDFT1-222	ENST00000538689	SHANK2	Q9UPX8	1470 aa		10.2	□□□□□ -0.78
FDFT1-222	ENST00000538689	MSH5	O43196	834 aa		10.19	□□□□□ -0.78
FDFT1-222	ENST00000538689	ERICH6	Q7L0X2	663 aa		10.19	□□□□□ -0.78
FDFT1-222	ENST00000538689	SIN3A	Q96ST3	1273 aa		10.19	□□□□□ -0.78
FDFT1-222	ENST00000538689	ADGB	Q8N7X0	1667 aa		10.19	□□□□□ -0.78
FDFT1-222	ENST00000538689	ARHGEF5	Q12774	1597 aa		10.19	□□□□□ -0.78
FDFT1-222	ENST00000538689	RSPH4A	Q5TD94	716 aa		10.18	□□□□□ -0.78
FDFT1-222	ENST00000538689	MBD5	Q9P267	1494 aa		10.18	□□□□□ -0.78
FDFT1-222	ENST00000538689	MYO5C	Q9NQX4	1742 aa		10.18	□□□□□ -0.78

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