RNA–Protein interactions for RNA: ENST00000538564.5

FOXM1-208, Transcript of forkhead box M1, humanhuman

TSL 3

Gene FOXM1, Length 693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-208ENST00000538564 APLP2Q06481 763 aa13.23□□□□□ -0.29
FOXM1-208ENST00000538564 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
FOXM1-208ENST00000538564 EHBP1L1Q8N3D4 1523 aa13.21□□□□□ -0.29
FOXM1-208ENST00000538564 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
FOXM1-208ENST00000538564 FANCAO15360 1455 aa13.21□□□□□ -0.3
FOXM1-208ENST00000538564 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
FOXM1-208ENST00000538564 AKNAQ7Z591 1439 aa13.19□□□□□ -0.3
FOXM1-208ENST00000538564 PTPRMP28827 1452 aa13.17□□□□□ -0.3
FOXM1-208ENST00000538564 MYO5CQ9NQX4 1742 aa13.17□□□□□ -0.3
FOXM1-208ENST00000538564 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
FOXM1-208ENST00000538564 PPARGC1BQ86YN6 1023 aaKnown RBP13.17□□□□□ -0.3
FOXM1-208ENST00000538564 CERKQ8TCT0 537 aa13.17□□□□□ -0.3
FOXM1-208ENST00000538564 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
FOXM1-208ENST00000538564 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
FOXM1-208ENST00000538564 GPATCH8Q9UKJ3 1502 aaKnown RBP13.16□□□□□ -0.3
FOXM1-208ENST00000538564 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
FOXM1-208ENST00000538564 CFDP1Q9UEE9 299 aaPredicted RBP13.14□□□□□ -0.31
FOXM1-208ENST00000538564 DENND4BO75064 1496 aaPredicted RBP13.14□□□□□ -0.31
FOXM1-208ENST00000538564 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
FOXM1-208ENST00000538564 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
FOXM1-208ENST00000538564 PREX2Q70Z35 1606 aa13.13□□□□□ -0.31
FOXM1-208ENST00000538564 HSPA2P54652 639 aa13.12□□□□□ -0.31
FOXM1-208ENST00000538564 SUPT6HQ7KZ85 1726 aaKnown RBP13.12□□□□□ -0.31
FOXM1-208ENST00000538564 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
FOXM1-208ENST00000538564 CDC42BPAQ5VT25 1732 aa13.1□□□□□ -0.31
FOXM1-208ENST00000538564 ZNF777Q9ULD5 760 aaPredicted RBP13.1□□□□□ -0.31
FOXM1-208ENST00000538564 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
FOXM1-208ENST00000538564 PLEKHH2Q8IVE3 1493 aa13.09□□□□□ -0.31
FOXM1-208ENST00000538564 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.32
FOXM1-208ENST00000538564 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
FOXM1-208ENST00000538564 ZNF518AQ6AHZ1 1483 aa13.07□□□□□ -0.32
FOXM1-208ENST00000538564 ITSN2Q9NZM3 1697 aa13.07□□□□□ -0.32
FOXM1-208ENST00000538564 ABCC1P33527 1531 aa13.07□□□□□ -0.32
FOXM1-208ENST00000538564 FRMPD1Q5SYB0 1578 aa13.07□□□□□ -0.32
FOXM1-208ENST00000538564 MAGI2Q86UL8 1455 aa13.06□□□□□ -0.32
FOXM1-208ENST00000538564 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
FOXM1-208ENST00000538564 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
FOXM1-208ENST00000538564 RICTORQ6R327 1708 aa13.05□□□□□ -0.32
FOXM1-208ENST00000538564 ZMYM4Q5VZL5 1548 aa13.05□□□□□ -0.32
FOXM1-208ENST00000538564 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
FOXM1-208ENST00000538564 SAMD9LQ8IVG5 1584 aa13.05□□□□□ -0.32
FOXM1-208ENST00000538564 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
FOXM1-208ENST00000538564 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
FOXM1-208ENST00000538564 HNRNPMP52272 730 aaKnown RBP eCLIP13.04□□□□□ -0.32
FOXM1-208ENST00000538564 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
FOXM1-208ENST00000538564 ZNF644Q9H582 1327 aaPredicted RBP13.04□□□□□ -0.32
FOXM1-208ENST00000538564 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
FOXM1-208ENST00000538564 RSPH4AQ5TD94 716 aa13.03□□□□□ -0.32
FOXM1-208ENST00000538564 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
FOXM1-208ENST00000538564 KDM5CP41229 1560 aa13.02□□□□□ -0.33
FOXM1-208ENST00000538564 MLH3Q9UHC1 1453 aa13.01□□□□□ -0.33
FOXM1-208ENST00000538564 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
FOXM1-208ENST00000538564 ARHGEF40Q8TER5 1519 aa13□□□□□ -0.33
FOXM1-208ENST00000538564 CAMSAP2Q08AD1 1489 aa13□□□□□ -0.33
FOXM1-208ENST00000538564 MBD5Q9P267 1494 aa13□□□□□ -0.33
FOXM1-208ENST00000538564 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
FOXM1-208ENST00000538564 MYT1LQ9UL68 1186 aa13□□□□□ -0.33
FOXM1-208ENST00000538564 FGD6Q6ZV73 1430 aa12.99□□□□□ -0.33
FOXM1-208ENST00000538564 YEATS2Q9ULM3 1422 aa12.99□□□□□ -0.33
FOXM1-208ENST00000538564 MADDQ8WXG6 1647 aa12.98□□□□□ -0.33
FOXM1-208ENST00000538564 ATP10AO60312 1499 aa12.97□□□□□ -0.33
FOXM1-208ENST00000538564 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
FOXM1-208ENST00000538564 ARHGEF5Q12774 1597 aa12.95□□□□□ -0.34
FOXM1-208ENST00000538564 SPATA31D1Q6ZQQ2 1576 aa12.95□□□□□ -0.34
FOXM1-208ENST00000538564 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
FOXM1-208ENST00000538564 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
FOXM1-208ENST00000538564 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
FOXM1-208ENST00000538564 TCOF1Q13428 1488 aaKnown RBP12.95□□□□□ -0.34
FOXM1-208ENST00000538564 RTEL1-TNFRSF6BF6WH68 1400 aa12.95□□□□□ -0.34
FOXM1-208ENST00000538564 C9orf84Q5VXU9 1444 aa12.95□□□□□ -0.34
FOXM1-208ENST00000538564 RRBP1Q9P2E9 1410 aaKnown RBP12.95□□□□□ -0.34
FOXM1-208ENST00000538564 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
FOXM1-208ENST00000538564 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
FOXM1-208ENST00000538564 KIDINS220Q9ULH0 1771 aa12.92□□□□□ -0.34
FOXM1-208ENST00000538564 FAM50AQ14320 339 aaKnown RBP12.92□□□□□ -0.34
FOXM1-208ENST00000538564 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
FOXM1-208ENST00000538564 REREQ9P2R6 1566 aa12.91□□□□□ -0.34
FOXM1-208ENST00000538564 INO80Q9ULG1 1556 aaPredicted RBP12.91□□□□□ -0.34
FOXM1-208ENST00000538564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
FOXM1-208ENST00000538564 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
FOXM1-208ENST00000538564 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
FOXM1-208ENST00000538564 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
FOXM1-208ENST00000538564 ABCC5O15440 1437 aa12.89□□□□□ -0.35
FOXM1-208ENST00000538564 AGLP35573 1532 aa12.88□□□□□ -0.35
FOXM1-208ENST00000538564 MLECQ14165 292 aa12.88□□□□□ -0.35
FOXM1-208ENST00000538564 A2MP01023 1474 aa12.88□□□□□ -0.35
FOXM1-208ENST00000538564 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
FOXM1-208ENST00000538564 DAPK1P53355 1430 aa12.88□□□□□ -0.35
FOXM1-208ENST00000538564 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
FOXM1-208ENST00000538564 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
FOXM1-208ENST00000538564 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
FOXM1-208ENST00000538564 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
FOXM1-208ENST00000538564 PLXNC1O60486 1568 aa12.85□□□□□ -0.35
FOXM1-208ENST00000538564 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
FOXM1-208ENST00000538564 ITGAEP38570 1179 aa12.84□□□□□ -0.35
FOXM1-208ENST00000538564 SIGLEC1Q9BZZ2 1709 aa12.84□□□□□ -0.35
FOXM1-208ENST00000538564 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.36
FOXM1-208ENST00000538564 CEBPAP49715 358 aaPredicted RBP12.82□□□□□ -0.36
FOXM1-208ENST00000538564 CHIC2Q9UKJ5 165 aa12.82□□□□□ -0.36
FOXM1-208ENST00000538564 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms