RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 MAGI2Q86UL8 1455 aa5.41□□□□□ -1.54
PTPN22-211ENST00000538253 ERCC6L2Q5T890 1561 aa5.41□□□□□ -1.54
PTPN22-211ENST00000538253 ZCCHC11Q5TAX3 1644 aaKnown RBP5.41□□□□□ -1.54
PTPN22-211ENST00000538253 TSPY4P0CV99 314 aa5.41□□□□□ -1.54
PTPN22-211ENST00000538253 TSPY10P0CW01 314 aa5.41□□□□□ -1.54
PTPN22-211ENST00000538253 PLCH2O75038 1416 aa5.41□□□□□ -1.54
PTPN22-211ENST00000538253 KIAA1107Q9UPP5 1409 aa5.4□□□□□ -1.55
PTPN22-211ENST00000538253 DENND4BO75064 1496 aaPredicted RBP5.4□□□□□ -1.55
PTPN22-211ENST00000538253 MYT1LQ9UL68 1186 aa5.4□□□□□ -1.55
PTPN22-211ENST00000538253 DIP2BQ9P265 1576 aa5.39□□□□□ -1.55
PTPN22-211ENST00000538253 ESF1Q9H501 851 aaKnown RBP5.39□□□□□ -1.55
PTPN22-211ENST00000538253 ABCA9Q8IUA7 1624 aa5.39□□□□□ -1.55
PTPN22-211ENST00000538253 AKNAQ7Z591 1439 aa5.39□□□□□ -1.55
PTPN22-211ENST00000538253 PCF11O94913 1555 aaKnown RBP5.38□□□□□ -1.55
PTPN22-211ENST00000538253 ITSN2Q9NZM3 1697 aa5.38□□□□□ -1.55
PTPN22-211ENST00000538253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPN22-211ENST00000538253 SUPT6HQ7KZ85 1726 aaKnown RBP5.38□□□□□ -1.55
PTPN22-211ENST00000538253 TIAM1Q13009 1591 aa5.38□□□□□ -1.55
PTPN22-211ENST00000538253 LOC105371045A0A1W2PR82 267 aa5.38□□□□□ -1.55
PTPN22-211ENST00000538253 MYOM3Q5VTT5 1437 aa5.38□□□□□ -1.55
PTPN22-211ENST00000538253 FANCAO15360 1455 aa5.37□□□□□ -1.55
PTPN22-211ENST00000538253 LRRC9Q6ZRR7 1453 aa5.37□□□□□ -1.55
PTPN22-211ENST00000538253 ARHGAP5Q13017 1502 aa5.37□□□□□ -1.55
PTPN22-211ENST00000538253 ZNF518AQ6AHZ1 1483 aa5.37□□□□□ -1.55
PTPN22-211ENST00000538253 EIF5BO60841 1220 aaKnown RBP5.36□□□□□ -1.55
PTPN22-211ENST00000538253 RTEL1-TNFRSF6BF6WH68 1400 aa5.36□□□□□ -1.55
PTPN22-211ENST00000538253 ADGRL1O94910 1474 aa5.36□□□□□ -1.55
PTPN22-211ENST00000538253 SPAG9O60271 1321 aaKnown RBP5.35□□□□□ -1.55
PTPN22-211ENST00000538253 FAM135AQ9P2D6 1515 aa5.35□□□□□ -1.55
PTPN22-211ENST00000538253 CDK13Q14004 1512 aaKnown RBP5.35□□□□□ -1.55
PTPN22-211ENST00000538253 NCOA2Q15596 1464 aa5.35□□□□□ -1.55
PTPN22-211ENST00000538253 SCAPERQ9BY12 1400 aa5.35□□□□□ -1.55
PTPN22-211ENST00000538253 KDM6BO15054 1643 aa5.35□□□□□ -1.55
PTPN22-211ENST00000538253 MAP3K4Q9Y6R4 1608 aa5.35□□□□□ -1.55
PTPN22-211ENST00000538253 ARID3CA6NKF2 412 aa5.35□□□□□ -1.55
PTPN22-211ENST00000538253 KANK1Q14678 1352 aa5.34□□□□□ -1.55
PTPN22-211ENST00000538253 ANKRD30AQ9BXX3 1397 aa5.34□□□□□ -1.55
PTPN22-211ENST00000538253 MYO5CQ9NQX4 1742 aa5.34□□□□□ -1.55
PTPN22-211ENST00000538253 ZNF777Q9ULD5 760 aaPredicted RBP5.34□□□□□ -1.56
PTPN22-211ENST00000538253 CNTLNQ9NXG0 1405 aa5.34□□□□□ -1.56
PTPN22-211ENST00000538253 CCDC141Q6ZP82 1450 aa5.33□□□□□ -1.56
PTPN22-211ENST00000538253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPN22-211ENST00000538253 GPATCH8Q9UKJ3 1502 aaKnown RBP5.33□□□□□ -1.56
PTPN22-211ENST00000538253 MLH3Q9UHC1 1453 aa5.33□□□□□ -1.56
PTPN22-211ENST00000538253 SHANK2Q9UPX8 1470 aa5.33□□□□□ -1.56
PTPN22-211ENST00000538253 ADRA2BP18089 450 aa5.32□□□□□ -1.56
PTPN22-211ENST00000538253 PREX2Q70Z35 1606 aa5.32□□□□□ -1.56
PTPN22-211ENST00000538253 C9orf84Q5VXU9 1444 aa5.32□□□□□ -1.56
PTPN22-211ENST00000538253 ZMYM4Q5VZL5 1548 aa5.32□□□□□ -1.56
PTPN22-211ENST00000538253 ARHGEF5Q12774 1597 aa5.32□□□□□ -1.56
PTPN22-211ENST00000538253 ATP10AO60312 1499 aa5.31□□□□□ -1.56
PTPN22-211ENST00000538253 PIAS4Q8N2W9 510 aaPredicted RBP5.31□□□□□ -1.56
PTPN22-211ENST00000538253 FGD6Q6ZV73 1430 aa5.31□□□□□ -1.56
PTPN22-211ENST00000538253 ARID4BQ4LE39 1312 aaPredicted RBP5.31□□□□□ -1.56
PTPN22-211ENST00000538253 ZFYVE16Q7Z3T8 1539 aa5.31□□□□□ -1.56
PTPN22-211ENST00000538253 FAM50AQ14320 339 aaKnown RBP5.3□□□□□ -1.56
PTPN22-211ENST00000538253 PCDH10Q9P2E7 1040 aa5.3□□□□□ -1.56
PTPN22-211ENST00000538253 TCOF1Q13428 1488 aaKnown RBP5.3□□□□□ -1.56
PTPN22-211ENST00000538253 ROCK1Q13464 1354 aa5.3□□□□□ -1.56
PTPN22-211ENST00000538253 PLEKHG5O94827 1062 aa5.3□□□□□ -1.56
PTPN22-211ENST00000538253 ABCC1P33527 1531 aa5.3□□□□□ -1.56
PTPN22-211ENST00000538253 REREQ9P2R6 1566 aa5.29□□□□□ -1.56
PTPN22-211ENST00000538253 HDGFP51858 240 aaKnown RBP5.29□□□□□ -1.56
PTPN22-211ENST00000538253 AGLP35573 1532 aa5.29□□□□□ -1.56
PTPN22-211ENST00000538253 HRCP23327 699 aa5.29□□□□□ -1.56
PTPN22-211ENST00000538253 CAMSAP2Q08AD1 1489 aa5.29□□□□□ -1.56
PTPN22-211ENST00000538253 DHX29Q7Z478 1369 aaKnown RBP5.28□□□□□ -1.56
PTPN22-211ENST00000538253 HECW2Q9P2P5 1572 aa5.28□□□□□ -1.56
PTPN22-211ENST00000538253 MAST1Q9Y2H9 1570 aa5.28□□□□□ -1.56
PTPN22-211ENST00000538253 KIF13AQ9H1H9 1805 aa5.28□□□□□ -1.56
PTPN22-211ENST00000538253 NCBP3Q53F19 620 aaKnown RBP5.28□□□□□ -1.56
PTPN22-211ENST00000538253 ARHGEF40Q8TER5 1519 aa5.27□□□□□ -1.57
PTPN22-211ENST00000538253 ERBINQ96RT1 1412 aa5.27□□□□□ -1.57
PTPN22-211ENST00000538253 TTC37Q6PGP7 1564 aa5.27□□□□□ -1.57
PTPN22-211ENST00000538253 DUOX2Q9NRD8 1548 aa5.27□□□□□ -1.57
PTPN22-211ENST00000538253 KDM5CP41229 1560 aa5.27□□□□□ -1.57
PTPN22-211ENST00000538253 A2MP01023 1474 aa5.27□□□□□ -1.57
PTPN22-211ENST00000538253 RRBP1Q9P2E9 1410 aaKnown RBP5.27□□□□□ -1.57
PTPN22-211ENST00000538253 ATP7AQ04656 1500 aa5.26□□□□□ -1.57
PTPN22-211ENST00000538253 HNRNPMP52272 730 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTPN22-211ENST00000538253 ADGRL2O95490 1459 aa5.26□□□□□ -1.57
PTPN22-211ENST00000538253 DAPK1P53355 1430 aa5.26□□□□□ -1.57
PTPN22-211ENST00000538253 PTPN23Q9H3S7 1636 aa5.26□□□□□ -1.57
PTPN22-211ENST00000538253 KIF15Q9NS87 1388 aa5.25□□□□□ -1.57
PTPN22-211ENST00000538253 KANK4Q5T7N3 995 aaPredicted RBP5.25□□□□□ -1.57
PTPN22-211ENST00000538253 SYCP2Q9BX26 1530 aa5.25□□□□□ -1.57
PTPN22-211ENST00000538253 STAC3Q96MF2 364 aa5.25□□□□□ -1.57
PTPN22-211ENST00000538253 DMRT2Q9Y5R5 561 aa5.25□□□□□ -1.57
PTPN22-211ENST00000538253 SAMD9LQ8IVG5 1584 aa5.24□□□□□ -1.57
PTPN22-211ENST00000538253 RAPGEF3O95398 923 aa5.24□□□□□ -1.57
PTPN22-211ENST00000538253 PLXNC1O60486 1568 aa5.24□□□□□ -1.57
PTPN22-211ENST00000538253 ADGBQ8N7X0 1667 aa5.24□□□□□ -1.57
PTPN22-211ENST00000538253 MBD5Q9P267 1494 aa5.24□□□□□ -1.57
PTPN22-211ENST00000538253 EIF2AK4Q9P2K8 1649 aaKnown RBP5.24□□□□□ -1.57
PTPN22-211ENST00000538253 AFAP1Q8N556 730 aa5.24□□□□□ -1.57
PTPN22-211ENST00000538253 CDC42BPAQ5VT25 1732 aa5.24□□□□□ -1.57
PTPN22-211ENST00000538253 TSPOAP1O95153 1857 aa5.23□□□□□ -1.57
PTPN22-211ENST00000538253 TRAPPC8Q9Y2L5 1435 aa5.23□□□□□ -1.57
PTPN22-211ENST00000538253 DNMT1P26358 1616 aaKnown RBP5.23□□□□□ -1.57
PTPN22-211ENST00000538253 WASHC2CQ9Y4E1 1318 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms