RNA–Protein interactions for RNA: ENST00000538142.5

SSPN-205, Transcript of sarcospan, humanhuman

TSL 4

Gene SSPN, Length 553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-205ENST00000538142 FBXO41Q8TF61 875 aa29.77■■■□□ 2.36
SSPN-205ENST00000538142 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
SSPN-205ENST00000538142 ATP1B4Q9UN42 357 aaPredicted RBP29.76■■■□□ 2.35
SSPN-205ENST00000538142 MYO5CQ9NQX4 1742 aa29.75■■■□□ 2.35
SSPN-205ENST00000538142 CDK11AQ9UQ88 783 aaPredicted RBP29.74■■■□□ 2.35
SSPN-205ENST00000538142 EFCAB2Q5VUJ9 269 aa29.72■■■□□ 2.35
SSPN-205ENST00000538142 KIF14Q15058 1648 aa29.68■■■□□ 2.34
SSPN-205ENST00000538142 ATP10AO60312 1499 aa29.68■■■□□ 2.34
SSPN-205ENST00000538142 FER1L4A9Z1Z3 1794 aa29.67■■■□□ 2.34
SSPN-205ENST00000538142 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
SSPN-205ENST00000538142 MLECQ14165 292 aa29.66■■■□□ 2.34
SSPN-205ENST00000538142 TROQ12816 1431 aaPredicted RBP29.65■■■□□ 2.34
SSPN-205ENST00000538142 PLPPR3Q6T4P5 718 aa29.65■■■□□ 2.34
SSPN-205ENST00000538142 C9orf84Q5VXU9 1444 aa29.63■■■□□ 2.33
SSPN-205ENST00000538142 LRRIQ1Q96JM4 1722 aa29.63■■■□□ 2.33
SSPN-205ENST00000538142 HSPA2P54652 639 aa29.62■■■□□ 2.33
SSPN-205ENST00000538142 CLIP1P30622 1438 aa29.61■■■□□ 2.33
SSPN-205ENST00000538142 ZNF518AQ6AHZ1 1483 aa29.61■■■□□ 2.33
SSPN-205ENST00000538142 ARHGEF12Q9NZN5 1544 aa29.61■■■□□ 2.33
SSPN-205ENST00000538142 ARHGAP5Q13017 1502 aa29.59■■■□□ 2.33
SSPN-205ENST00000538142 KDM5CP41229 1560 aa29.56■■■□□ 2.32
SSPN-205ENST00000538142 AFAP1Q8N556 730 aa29.55■■■□□ 2.32
SSPN-205ENST00000538142 CDC42BPBQ9Y5S2 1711 aa29.54■■■□□ 2.32
SSPN-205ENST00000538142 CASKIN1Q8WXD9 1431 aa29.48■■■□□ 2.31
SSPN-205ENST00000538142 PREX1Q8TCU6 1659 aa29.48■■■□□ 2.31
SSPN-205ENST00000538142 CCDC18Q5T9S5 1454 aa29.48■■■□□ 2.31
SSPN-205ENST00000538142 DIP2CQ9Y2E4 1556 aa29.47■■■□□ 2.31
SSPN-205ENST00000538142 PREX2Q70Z35 1606 aa29.46■■■□□ 2.31
SSPN-205ENST00000538142 REREQ9P2R6 1566 aa29.46■■■□□ 2.31
SSPN-205ENST00000538142 MLH3Q9UHC1 1453 aa29.45■■■□□ 2.31
SSPN-205ENST00000538142 CEBPAP49715 358 aaPredicted RBP29.45■■■□□ 2.31
SSPN-205ENST00000538142 MYT1LQ9UL68 1186 aa29.45■■■□□ 2.31
SSPN-205ENST00000538142 ABCA6Q8N139 1617 aa29.42■■■□□ 2.3
SSPN-205ENST00000538142 ABCC1P33527 1531 aa29.41■■■□□ 2.3
SSPN-205ENST00000538142 SETD1BQ9UPS6 1966 aaKnown RBP29.39■■■□□ 2.3
SSPN-205ENST00000538142 TRAPPC8Q9Y2L5 1435 aa29.39■■■□□ 2.3
SSPN-205ENST00000538142 ITSN2Q9NZM3 1697 aa29.39■■■□□ 2.3
SSPN-205ENST00000538142 CDC42BPAQ5VT25 1732 aa29.37■■■□□ 2.29
SSPN-205ENST00000538142 CERKQ8TCT0 537 aa29.37■■■□□ 2.29
SSPN-205ENST00000538142 AGLP35573 1532 aa29.36■■■□□ 2.29
SSPN-205ENST00000538142 FYCO1Q9BQS8 1478 aa29.35■■■□□ 2.29
SSPN-205ENST00000538142 UHRF1BP1Q6BDS2 1440 aa29.33■■■□□ 2.29
SSPN-205ENST00000538142 STRCQ7RTU9 1775 aa29.32■■■□□ 2.28
SSPN-205ENST00000538142 KIDINS220Q9ULH0 1771 aa29.32■■■□□ 2.28
SSPN-205ENST00000538142 C3P01024 1663 aa29.31■■■□□ 2.28
SSPN-205ENST00000538142 DMRT2Q9Y5R5 561 aa29.29■■■□□ 2.28
SSPN-205ENST00000538142 ESF1Q9H501 851 aaKnown RBP29.27■■■□□ 2.28
SSPN-205ENST00000538142 SAMD9LQ8IVG5 1584 aa29.24■■■□□ 2.27
SSPN-205ENST00000538142 GPATCH8Q9UKJ3 1502 aaKnown RBP29.23■■■□□ 2.27
SSPN-205ENST00000538142 ZNF777Q9ULD5 760 aaPredicted RBP29.22■■■□□ 2.27
SSPN-205ENST00000538142 CNTLNQ9NXG0 1405 aa29.21■■■□□ 2.27
SSPN-205ENST00000538142 SYCP2Q9BX26 1530 aa29.2■■■□□ 2.26
SSPN-205ENST00000538142 HNRNPMP52272 730 aaKnown RBP eCLIP29.16■■■□□ 2.26
SSPN-205ENST00000538142 SPAG9O60271 1321 aaKnown RBP29.16■■■□□ 2.26
SSPN-205ENST00000538142 PTPRTO14522 1441 aa29.15■■■□□ 2.26
SSPN-205ENST00000538142 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
SSPN-205ENST00000538142 MROH2AA6NES4 1674 aa29.14■■■□□ 2.26
SSPN-205ENST00000538142 PLEKHH2Q8IVE3 1493 aa29.12■■■□□ 2.25
SSPN-205ENST00000538142 CFDP1Q9UEE9 299 aaPredicted RBP29.12■■■□□ 2.25
SSPN-205ENST00000538142 SUPT6HQ7KZ85 1726 aaKnown RBP29.11■■■□□ 2.25
SSPN-205ENST00000538142 ATP7AQ04656 1500 aa29.1■■■□□ 2.25
SSPN-205ENST00000538142 CCNB3Q8WWL7 1395 aa29.1■■■□□ 2.25
SSPN-205ENST00000538142 NPATQ14207 1427 aa29.09■■■□□ 2.25
SSPN-205ENST00000538142 INO80Q9ULG1 1556 aaPredicted RBP29.09■■■□□ 2.25
SSPN-205ENST00000538142 ZMYM3Q14202 1370 aa29.08■■■□□ 2.25
SSPN-205ENST00000538142 PLXNC1O60486 1568 aa29.07■■■□□ 2.24
SSPN-205ENST00000538142 NCOA1Q15788 1441 aa29.06■■■□□ 2.24
SSPN-205ENST00000538142 MTUS2Q5JR59 1369 aa29.06■■■□□ 2.24
SSPN-205ENST00000538142 A2MP01023 1474 aa29.04■■■□□ 2.24
SSPN-205ENST00000538142 CLTCQ00610 1675 aaKnown RBP29.02■■■□□ 2.24
SSPN-205ENST00000538142 CAMSAP1Q5T5Y3 1602 aa29■■■□□ 2.23
SSPN-205ENST00000538142 LTBP4Q8N2S1 1624 aa28.99■■■□□ 2.23
SSPN-205ENST00000538142 TIAM1Q13009 1591 aa28.98■■■□□ 2.23
SSPN-205ENST00000538142 ADGBQ8N7X0 1667 aa28.98■■■□□ 2.23
SSPN-205ENST00000538142 ZNF644Q9H582 1327 aaPredicted RBP28.95■■■□□ 2.23
SSPN-205ENST00000538142 EHBP1L1Q8N3D4 1523 aa28.95■■■□□ 2.23
SSPN-205ENST00000538142 GGT6Q6P531 493 aa28.95■■■□□ 2.22
SSPN-205ENST00000538142 PPP6R1Q9UPN7 881 aa28.95■■■□□ 2.22
SSPN-205ENST00000538142 MBD5Q9P267 1494 aa28.94■■■□□ 2.22
SSPN-205ENST00000538142 MYO3AQ8NEV4 1616 aa28.93■■■□□ 2.22
SSPN-205ENST00000538142 PTPRKQ15262 1439 aa28.93■■■□□ 2.22
SSPN-205ENST00000538142 ZNF142P52746 1687 aaPredicted RBP28.93■■■□□ 2.22
SSPN-205ENST00000538142 IQSEC2Q5JU85 1478 aa28.92■■■□□ 2.22
SSPN-205ENST00000538142 CEP162Q5TB80 1403 aa28.92■■■□□ 2.22
SSPN-205ENST00000538142 RTEL1-TNFRSF6BF6WH68 1400 aa28.9■■■□□ 2.22
SSPN-205ENST00000538142 PLA2R1Q13018 1463 aa28.88■■■□□ 2.21
SSPN-205ENST00000538142 NCKAP5LQ9HCH0 1330 aa28.88■■■□□ 2.21
SSPN-205ENST00000538142 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
SSPN-205ENST00000538142 PKD2Q13563 968 aa28.85■■■□□ 2.21
SSPN-205ENST00000538142 DHX29Q7Z478 1369 aaKnown RBP28.84■■■□□ 2.21
SSPN-205ENST00000538142 DISP3Q9P2K9 1392 aa28.82■■■□□ 2.2
SSPN-205ENST00000538142 TCOF1Q13428 1488 aaKnown RBP28.82■■■□□ 2.2
SSPN-205ENST00000538142 ZNF335Q9H4Z2 1342 aaPredicted RBP28.78■■■□□ 2.2
SSPN-205ENST00000538142 NCOA2Q15596 1464 aa28.78■■■□□ 2.2
SSPN-205ENST00000538142 CCDC141Q6ZP82 1450 aa28.78■■■□□ 2.2
SSPN-205ENST00000538142 RSPH4AQ5TD94 716 aa28.77■■■□□ 2.2
SSPN-205ENST00000538142 A2ML1A8K2U0 1454 aa28.77■■■□□ 2.2
SSPN-205ENST00000538142 CAMSAP2Q08AD1 1489 aa28.76■■■□□ 2.19
SSPN-205ENST00000538142 DNMT1P26358 1616 aaKnown RBP28.75■■■□□ 2.19
SSPN-205ENST00000538142 KIF3BO15066 747 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms