RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
GGA3-201ENST00000537686 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
GGA3-201ENST00000537686 SUPT16HQ9Y5B9 1047 aaKnown RBP13.31□□□□□ -0.28
GGA3-201ENST00000537686 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
GGA3-201ENST00000537686 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
GGA3-201ENST00000537686 PRG4Q92954 1404 aaPredicted RBP13.29□□□□□ -0.28
GGA3-201ENST00000537686 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
GGA3-201ENST00000537686 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
GGA3-201ENST00000537686 SYNJ2O15056 1496 aa13.28□□□□□ -0.28
GGA3-201ENST00000537686 TIMELESSQ9UNS1 1208 aa13.28□□□□□ -0.28
GGA3-201ENST00000537686 FOXD1Q16676 465 aa13.28□□□□□ -0.28
GGA3-201ENST00000537686 HNRNPMP52272 730 aaKnown RBP eCLIP13.27□□□□□ -0.28
GGA3-201ENST00000537686 IQGAP2Q13576 1575 aa13.27□□□□□ -0.29
GGA3-201ENST00000537686 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
GGA3-201ENST00000537686 POGKQ9P215 609 aa13.27□□□□□ -0.29
GGA3-201ENST00000537686 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
GGA3-201ENST00000537686 PKD2Q13563 968 aa13.26□□□□□ -0.29
GGA3-201ENST00000537686 FGD6Q6ZV73 1430 aa13.26□□□□□ -0.29
GGA3-201ENST00000537686 A0A0G2JS52 829 aa13.25□□□□□ -0.29
GGA3-201ENST00000537686 TNNT2P45379 298 aaPredicted RBP13.25□□□□□ -0.29
GGA3-201ENST00000537686 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
GGA3-201ENST00000537686 NCOA2Q15596 1464 aa13.24□□□□□ -0.29
GGA3-201ENST00000537686 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
GGA3-201ENST00000537686 MYOM3Q5VTT5 1437 aa13.24□□□□□ -0.29
GGA3-201ENST00000537686 NBR1Q14596 966 aa13.24□□□□□ -0.29
GGA3-201ENST00000537686 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
GGA3-201ENST00000537686 GGT6Q6P531 493 aa13.23□□□□□ -0.29
GGA3-201ENST00000537686 MYH16Q9H6N6 1097 aa13.23□□□□□ -0.29
GGA3-201ENST00000537686 RRBP1Q9P2E9 1410 aaKnown RBP13.23□□□□□ -0.29
GGA3-201ENST00000537686 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
GGA3-201ENST00000537686 MLECQ14165 292 aa13.23□□□□□ -0.29
GGA3-201ENST00000537686 EFCAB2Q5VUJ9 269 aa13.23□□□□□ -0.29
GGA3-201ENST00000537686 WDR62O43379 1518 aa13.22□□□□□ -0.29
GGA3-201ENST00000537686 TMF1P82094 1093 aa13.2□□□□□ -0.3
GGA3-201ENST00000537686 HSPA5P11021 654 aaKnown RBP13.2□□□□□ -0.3
GGA3-201ENST00000537686 MPHOSPH9Q99550 1183 aa13.19□□□□□ -0.3
GGA3-201ENST00000537686 CDK13Q14004 1512 aaKnown RBP13.19□□□□□ -0.3
GGA3-201ENST00000537686 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
GGA3-201ENST00000537686 KANK1Q14678 1352 aa13.18□□□□□ -0.3
GGA3-201ENST00000537686 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
GGA3-201ENST00000537686 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
GGA3-201ENST00000537686 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
GGA3-201ENST00000537686 ANKRD30AQ9BXX3 1397 aa13.17□□□□□ -0.3
GGA3-201ENST00000537686 EPRSP07814 1512 aaKnown RBP13.17□□□□□ -0.3
GGA3-201ENST00000537686 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
GGA3-201ENST00000537686 NUP155O75694 1391 aa13.17□□□□□ -0.3
GGA3-201ENST00000537686 PLB1Q6P1J6 1458 aa13.17□□□□□ -0.3
GGA3-201ENST00000537686 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
GGA3-201ENST00000537686 U2SURPO15042 1029 aaKnown RBP13.16□□□□□ -0.3
GGA3-201ENST00000537686 ABCA5Q8WWZ7 1642 aa13.16□□□□□ -0.3
GGA3-201ENST00000537686 LAS1LQ9Y4W2 734 aaKnown RBP13.16□□□□□ -0.3
GGA3-201ENST00000537686 ARXQ96QS3 562 aa13.15□□□□□ -0.3
GGA3-201ENST00000537686 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
GGA3-201ENST00000537686 TARBP1Q13395 1621 aaKnown RBP13.15□□□□□ -0.3
GGA3-201ENST00000537686 EIF4G3O43432 1585 aaKnown RBP13.14□□□□□ -0.31
GGA3-201ENST00000537686 HAP1P54257 671 aaPredicted RBP13.14□□□□□ -0.31
GGA3-201ENST00000537686 FTSJ3Q8IY81 847 aaKnown RBP13.14□□□□□ -0.31
GGA3-201ENST00000537686 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
GGA3-201ENST00000537686 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
GGA3-201ENST00000537686 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
GGA3-201ENST00000537686 SRPK2P78362 688 aaKnown RBP13.13□□□□□ -0.31
GGA3-201ENST00000537686 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
GGA3-201ENST00000537686 TROQ12816 1431 aaPredicted RBP13.12□□□□□ -0.31
GGA3-201ENST00000537686 RSPH4AQ5TD94 716 aa13.12□□□□□ -0.31
GGA3-201ENST00000537686 PPP4R2Q9NY27 417 aa13.12□□□□□ -0.31
GGA3-201ENST00000537686 MAP3K1Q13233 1512 aa13.11□□□□□ -0.31
GGA3-201ENST00000537686 L3MBTL2Q969R5 705 aa13.11□□□□□ -0.31
GGA3-201ENST00000537686 CCER2I3L3R5 266 aa13.11□□□□□ -0.31
GGA3-201ENST00000537686 STK26Q9P289 416 aa13.11□□□□□ -0.31
GGA3-201ENST00000537686 B4GALNT3Q6L9W6 998 aa13.1□□□□□ -0.31
GGA3-201ENST00000537686 KIF3BO15066 747 aa13.1□□□□□ -0.31
GGA3-201ENST00000537686 SOX12O15370 315 aa13.1□□□□□ -0.31
GGA3-201ENST00000537686 RGS3P49796 1198 aa13.1□□□□□ -0.31
GGA3-201ENST00000537686 SPAG9O60271 1321 aaKnown RBP13.09□□□□□ -0.31
GGA3-201ENST00000537686 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.32
GGA3-201ENST00000537686 MORC1Q86VD1 984 aa13.08□□□□□ -0.32
GGA3-201ENST00000537686 UACAQ9BZF9 1416 aa13.08□□□□□ -0.32
GGA3-201ENST00000537686 PBRM1Q86U86 1689 aa13.06□□□□□ -0.32
GGA3-201ENST00000537686 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
GGA3-201ENST00000537686 HDGFP51858 240 aaKnown RBP13.05□□□□□ -0.32
GGA3-201ENST00000537686 BECN1Q14457 450 aa13.05□□□□□ -0.32
GGA3-201ENST00000537686 UGGT2Q9NYU1 1516 aa13.05□□□□□ -0.32
GGA3-201ENST00000537686 ROCK2O75116 1388 aaKnown RBP13.04□□□□□ -0.32
GGA3-201ENST00000537686 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
GGA3-201ENST00000537686 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
GGA3-201ENST00000537686 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
GGA3-201ENST00000537686 NUP160Q12769 1436 aa13.02□□□□□ -0.33
GGA3-201ENST00000537686 AFAP1Q8N556 730 aa13.02□□□□□ -0.33
GGA3-201ENST00000537686 KTN1Q86UP2 1357 aaKnown RBP13.02□□□□□ -0.33
GGA3-201ENST00000537686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.02□□□□□ -0.33
GGA3-201ENST00000537686 NUP153P49790 1475 aaKnown RBP13.01□□□□□ -0.33
GGA3-201ENST00000537686 THOC2Q8NI27 1593 aaKnown RBP13.01□□□□□ -0.33
GGA3-201ENST00000537686 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
GGA3-201ENST00000537686 DISP1Q96F81 1524 aa13□□□□□ -0.33
GGA3-201ENST00000537686 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
GGA3-201ENST00000537686 HFM1A2PYH4 1435 aa13□□□□□ -0.33
GGA3-201ENST00000537686 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
GGA3-201ENST00000537686 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
GGA3-201ENST00000537686 KIAA0556O60303 1618 aa12.99□□□□□ -0.33
GGA3-201ENST00000537686 ARHGAP5Q13017 1502 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms