RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 HIRIP3Q9BW71 556 aaPredicted RBP21.44■■□□□ 1.02
CHFR-213ENST00000536843 CDK13Q14004 1512 aaKnown RBP21.44■■□□□ 1.02
CHFR-213ENST00000536843 NUP160Q12769 1436 aa21.42■■□□□ 1.02
CHFR-213ENST00000536843 CEP170Q5SW79 1584 aa21.42■■□□□ 1.02
CHFR-213ENST00000536843 NBR1Q14596 966 aa21.41■■□□□ 1.02
CHFR-213ENST00000536843 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
CHFR-213ENST00000536843 PAK3O75914 559 aaPredicted RBP21.39■■□□□ 1.02
CHFR-213ENST00000536843 SALL2Q9Y467 1007 aaPredicted RBP21.39■■□□□ 1.02
CHFR-213ENST00000536843 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.01
CHFR-213ENST00000536843 CHIC2Q9UKJ5 165 aa21.38■■□□□ 1.01
CHFR-213ENST00000536843 DISP1Q96F81 1524 aa21.38■■□□□ 1.01
CHFR-213ENST00000536843 RRP7BPQ9NSQ0 103 aa21.37■■□□□ 1.01
CHFR-213ENST00000536843 KIAA0556O60303 1618 aa21.35■■□□□ 1.01
CHFR-213ENST00000536843 B4GALNT3Q6L9W6 998 aa21.32■■□□□ 1
CHFR-213ENST00000536843 TONSLQ96HA7 1378 aa21.32■■□□□ 1
CHFR-213ENST00000536843 CHD1O14646 1710 aa21.32■■□□□ 1
CHFR-213ENST00000536843 MIA2Q96PC5 1412 aa21.32■■□□□ 1
CHFR-213ENST00000536843 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
CHFR-213ENST00000536843 NUP153P49790 1475 aaKnown RBP21.28■■□□□ 1
CHFR-213ENST00000536843 IPO9Q96P70 1041 aaKnown RBP21.28■■□□□ 1
CHFR-213ENST00000536843 JPH4Q96JJ6 628 aa21.27■■□□□ 1
CHFR-213ENST00000536843 ANP32AP39687 249 aaKnown RBP21.24■□□□□ 0.99
CHFR-213ENST00000536843 RAPGEF6Q8TEU7 1601 aa21.24■□□□□ 0.99
CHFR-213ENST00000536843 AKNAQ7Z591 1439 aa21.24■□□□□ 0.99
CHFR-213ENST00000536843 GCC2Q8IWJ2 1684 aa21.23■□□□□ 0.99
CHFR-213ENST00000536843 IL27Q8NEV9 243 aa21.23■□□□□ 0.99
CHFR-213ENST00000536843 KDM6BO15054 1643 aa21.23■□□□□ 0.99
CHFR-213ENST00000536843 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
CHFR-213ENST00000536843 ZBED9Q6R2W3 1325 aa21.21■□□□□ 0.99
CHFR-213ENST00000536843 WASHC2AQ641Q2 1341 aa21.21■□□□□ 0.99
CHFR-213ENST00000536843 ZNF644Q9H582 1327 aaPredicted RBP21.2■□□□□ 0.98
CHFR-213ENST00000536843 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
CHFR-213ENST00000536843 UBE2Q2Q8WVN8 375 aa21.19■□□□□ 0.98
CHFR-213ENST00000536843 ZBTB47Q9UFB7 747 aaPredicted RBP21.19■□□□□ 0.98
CHFR-213ENST00000536843 DAPK1P53355 1430 aa21.17■□□□□ 0.98
CHFR-213ENST00000536843 MPHOSPH9Q99550 1183 aa21.17■□□□□ 0.98
CHFR-213ENST00000536843 PLB1Q6P1J6 1458 aa21.17■□□□□ 0.98
CHFR-213ENST00000536843 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
CHFR-213ENST00000536843 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
CHFR-213ENST00000536843 ABCC5O15440 1437 aa21.16■□□□□ 0.98
CHFR-213ENST00000536843 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
CHFR-213ENST00000536843 TROQ12816 1431 aaPredicted RBP21.13■□□□□ 0.97
CHFR-213ENST00000536843 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
CHFR-213ENST00000536843 SHROOM2Q13796 1616 aa21.13■□□□□ 0.97
CHFR-213ENST00000536843 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
CHFR-213ENST00000536843 C11orf95C9JLR9 678 aaPredicted RBP21.12■□□□□ 0.97
CHFR-213ENST00000536843 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
CHFR-213ENST00000536843 FOXD1Q16676 465 aa21.1■□□□□ 0.97
CHFR-213ENST00000536843 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
CHFR-213ENST00000536843 CCDC184Q52MB2 194 aa21.1■□□□□ 0.97
CHFR-213ENST00000536843 USP35Q9P2H5 1018 aa21.1■□□□□ 0.97
CHFR-213ENST00000536843 CFDP1Q9UEE9 299 aaPredicted RBP21.08■□□□□ 0.96
CHFR-213ENST00000536843 RTN4Q9NQC3 1192 aaKnown RBP21.07■□□□□ 0.96
CHFR-213ENST00000536843 WASHC2CQ9Y4E1 1318 aa21.07■□□□□ 0.96
CHFR-213ENST00000536843 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
CHFR-213ENST00000536843 SMG6Q86US8 1419 aaKnown RBP21.06■□□□□ 0.96
CHFR-213ENST00000536843 GPATCH8Q9UKJ3 1502 aaKnown RBP21.05■□□□□ 0.96
CHFR-213ENST00000536843 PRKRIP1Q9H875 184 aaPredicted RBP21.04■□□□□ 0.96
CHFR-213ENST00000536843 CAMSAP2Q08AD1 1489 aa21.04■□□□□ 0.96
CHFR-213ENST00000536843 ZNF777Q9ULD5 760 aaPredicted RBP21.04■□□□□ 0.96
CHFR-213ENST00000536843 HSPA5P11021 654 aaKnown RBP21.03■□□□□ 0.96
CHFR-213ENST00000536843 KIF14Q15058 1648 aa21.03■□□□□ 0.96
CHFR-213ENST00000536843 L3MBTL2Q969R5 705 aa21.03■□□□□ 0.96
CHFR-213ENST00000536843 FAM9BQ8IZU0 186 aa21.02■□□□□ 0.96
CHFR-213ENST00000536843 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.02■□□□□ 0.95
CHFR-213ENST00000536843 ANKRD30BQ9BXX2 1392 aa21.01■□□□□ 0.95
CHFR-213ENST00000536843 PTPRGP23470 1445 aa21■□□□□ 0.95
CHFR-213ENST00000536843 MRS2Q9HD23 443 aa21■□□□□ 0.95
CHFR-213ENST00000536843 ADCY10Q96PN6 1610 aa20.99■□□□□ 0.95
CHFR-213ENST00000536843 SLC4A1APQ9BWU0 796 aaKnown RBP20.99■□□□□ 0.95
CHFR-213ENST00000536843 ABCA8O94911 1581 aa20.98■□□□□ 0.95
CHFR-213ENST00000536843 ITSN2Q9NZM3 1697 aa20.98■□□□□ 0.95
CHFR-213ENST00000536843 PLEKHD1A6NEE1 506 aa20.98■□□□□ 0.95
CHFR-213ENST00000536843 NCOA1Q15788 1441 aa20.97■□□□□ 0.95
CHFR-213ENST00000536843 ATP10BO94823 1461 aa20.96■□□□□ 0.95
CHFR-213ENST00000536843 NEFMP07197 916 aa20.95■□□□□ 0.94
CHFR-213ENST00000536843 EIF4G2P78344 907 aaKnown RBP eCLIP20.95■□□□□ 0.94
CHFR-213ENST00000536843 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
CHFR-213ENST00000536843 ERCC6L2Q5T890 1561 aa20.94■□□□□ 0.94
CHFR-213ENST00000536843 RPRD2Q5VT52 1461 aaKnown RBP20.94■□□□□ 0.94
CHFR-213ENST00000536843 NUDCQ9Y266 331 aa20.94■□□□□ 0.94
CHFR-213ENST00000536843 CCDC7Q96M83 1385 aa20.93■□□□□ 0.94
CHFR-213ENST00000536843 PZPP20742 1482 aa20.92■□□□□ 0.94
CHFR-213ENST00000536843 PPM1GO15355 546 aaPredicted RBP20.92■□□□□ 0.94
CHFR-213ENST00000536843 ADGRL2O95490 1459 aa20.91■□□□□ 0.94
CHFR-213ENST00000536843 NBPF8Q3BBV2 869 aa20.9■□□□□ 0.94
CHFR-213ENST00000536843 ABCC10Q5T3U5 1492 aa20.9■□□□□ 0.94
CHFR-213ENST00000536843 ADGBQ8N7X0 1667 aa20.89■□□□□ 0.93
CHFR-213ENST00000536843 ANKRD30AQ9BXX3 1397 aa20.89■□□□□ 0.93
CHFR-213ENST00000536843 TEX14Q8IWB6 1497 aa20.88■□□□□ 0.93
CHFR-213ENST00000536843 CROCC2H7BZ55 1655 aa20.87■□□□□ 0.93
CHFR-213ENST00000536843 LAS1LQ9Y4W2 734 aaKnown RBP20.86■□□□□ 0.93
CHFR-213ENST00000536843 CDC42BPAQ5VT25 1732 aa20.86■□□□□ 0.93
CHFR-213ENST00000536843 TCERG1O14776 1098 aaKnown RBP20.85■□□□□ 0.93
CHFR-213ENST00000536843 PKD2Q13563 968 aa20.83■□□□□ 0.92
CHFR-213ENST00000536843 ANKRD50Q9ULJ7 1429 aa20.83■□□□□ 0.92
CHFR-213ENST00000536843 KIAA1107Q9UPP5 1409 aa20.82■□□□□ 0.92
CHFR-213ENST00000536843 BRPF3Q9ULD4 1205 aa20.81■□□□□ 0.92
CHFR-213ENST00000536843 ABCC2Q92887 1545 aa20.81■□□□□ 0.92
CHFR-213ENST00000536843 C9orf84Q5VXU9 1444 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms