RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
CDK5RAP3-202ENST00000536708 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
CDK5RAP3-202ENST00000536708 CCER1Q8TC90 406 aaPredicted RBP19.41■□□□□ 0.7
CDK5RAP3-202ENST00000536708 SAMD9LQ8IVG5 1584 aa19.4■□□□□ 0.7
CDK5RAP3-202ENST00000536708 ARHGAP5Q13017 1502 aa19.39■□□□□ 0.7
CDK5RAP3-202ENST00000536708 DNMT1P26358 1616 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-202ENST00000536708 CFDP1Q9UEE9 299 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-202ENST00000536708 CROCC2H7BZ55 1655 aa19.37■□□□□ 0.69
CDK5RAP3-202ENST00000536708 PTPRKQ15262 1439 aa19.37■□□□□ 0.69
CDK5RAP3-202ENST00000536708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.37■□□□□ 0.69
CDK5RAP3-202ENST00000536708 ZNF777Q9ULD5 760 aaPredicted RBP19.36■□□□□ 0.69
CDK5RAP3-202ENST00000536708 DIP2BQ9P265 1576 aa19.34■□□□□ 0.69
CDK5RAP3-202ENST00000536708 SYCP2Q9BX26 1530 aa19.32■□□□□ 0.68
CDK5RAP3-202ENST00000536708 PLCH2O75038 1416 aa19.32■□□□□ 0.68
CDK5RAP3-202ENST00000536708 DAPK1P53355 1430 aa19.3■□□□□ 0.68
CDK5RAP3-202ENST00000536708 KIF13AQ9H1H9 1805 aa19.3■□□□□ 0.68
CDK5RAP3-202ENST00000536708 MAP3K4Q9Y6R4 1608 aa19.3■□□□□ 0.68
CDK5RAP3-202ENST00000536708 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-202ENST00000536708 ARAP3Q8WWN8 1544 aa19.28■□□□□ 0.68
CDK5RAP3-202ENST00000536708 ABCC1P33527 1531 aa19.28■□□□□ 0.68
CDK5RAP3-202ENST00000536708 ABCC5O15440 1437 aa19.28■□□□□ 0.68
CDK5RAP3-202ENST00000536708 ADGBQ8N7X0 1667 aa19.27■□□□□ 0.68
CDK5RAP3-202ENST00000536708 TSPOAP1O95153 1857 aa19.27■□□□□ 0.67
CDK5RAP3-202ENST00000536708 GCC2Q8IWJ2 1684 aa19.26■□□□□ 0.67
CDK5RAP3-202ENST00000536708 ARHGEF12Q9NZN5 1544 aa19.26■□□□□ 0.67
CDK5RAP3-202ENST00000536708 FANCAO15360 1455 aa19.26■□□□□ 0.67
CDK5RAP3-202ENST00000536708 ARHGEF5Q12774 1597 aa19.25■□□□□ 0.67
CDK5RAP3-202ENST00000536708 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
CDK5RAP3-202ENST00000536708 MBD5Q9P267 1494 aa19.25■□□□□ 0.67
CDK5RAP3-202ENST00000536708 CHIC2Q9UKJ5 165 aa19.24■□□□□ 0.67
CDK5RAP3-202ENST00000536708 GLI2P10070 1586 aa19.24■□□□□ 0.67
CDK5RAP3-202ENST00000536708 CD109Q6YHK3 1445 aa19.23■□□□□ 0.67
CDK5RAP3-202ENST00000536708 PPRC1Q5VV67 1664 aaKnown RBP19.22■□□□□ 0.67
CDK5RAP3-202ENST00000536708 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.674e-8■■□□□ 12.7
CDK5RAP3-202ENST00000536708 CCDC141Q6ZP82 1450 aa19.21■□□□□ 0.67
CDK5RAP3-202ENST00000536708 KDM6BO15054 1643 aa19.21■□□□□ 0.67
CDK5RAP3-202ENST00000536708 CFAP74Q9C0B2 1584 aa19.2■□□□□ 0.66
CDK5RAP3-202ENST00000536708 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
CDK5RAP3-202ENST00000536708 HFM1A2PYH4 1435 aa19.18■□□□□ 0.66
CDK5RAP3-202ENST00000536708 AKNAQ7Z591 1439 aa19.18■□□□□ 0.66
CDK5RAP3-202ENST00000536708 EFCAB2Q5VUJ9 269 aa19.18■□□□□ 0.66
CDK5RAP3-202ENST00000536708 ADGRL1O94910 1474 aa19.18■□□□□ 0.66
CDK5RAP3-202ENST00000536708 PLEKHH2Q8IVE3 1493 aa19.18■□□□□ 0.66
CDK5RAP3-202ENST00000536708 SHANK2Q9UPX8 1470 aa19.18■□□□□ 0.66
CDK5RAP3-202ENST00000536708 NAIPQ13075 1403 aa19.18■□□□□ 0.66
CDK5RAP3-202ENST00000536708 C9orf84Q5VXU9 1444 aa19.17■□□□□ 0.66
CDK5RAP3-202ENST00000536708 TRAPPC8Q9Y2L5 1435 aa19.17■□□□□ 0.66
CDK5RAP3-202ENST00000536708 FAM69CQ0P6D2 419 aa19.16■□□□□ 0.66
CDK5RAP3-202ENST00000536708 RRP7BPQ9NSQ0 103 aa19.16■□□□□ 0.66
CDK5RAP3-202ENST00000536708 SETD5Q9C0A6 1442 aa19.16■□□□□ 0.66
CDK5RAP3-202ENST00000536708 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
CDK5RAP3-202ENST00000536708 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-202ENST00000536708 ADGRL2O95490 1459 aa19.14■□□□□ 0.65
CDK5RAP3-202ENST00000536708 MAST1Q9Y2H9 1570 aa19.13■□□□□ 0.65
CDK5RAP3-202ENST00000536708 ROCK1Q13464 1354 aa19.11■□□□□ 0.65
CDK5RAP3-202ENST00000536708 NCOA1Q15788 1441 aa19.11■□□□□ 0.65
CDK5RAP3-202ENST00000536708 SCAPERQ9BY12 1400 aa19.11■□□□□ 0.65
CDK5RAP3-202ENST00000536708 ZFYVE16Q7Z3T8 1539 aa19.11■□□□□ 0.65
CDK5RAP3-202ENST00000536708 INO80Q9ULG1 1556 aaPredicted RBP19.1■□□□□ 0.65
CDK5RAP3-202ENST00000536708 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
CDK5RAP3-202ENST00000536708 NEO1Q92859 1461 aa19.09■□□□□ 0.65
CDK5RAP3-202ENST00000536708 RICTORQ6R327 1708 aa19.08■□□□□ 0.65
CDK5RAP3-202ENST00000536708 AFAP1Q8N556 730 aa19.06■□□□□ 0.64
CDK5RAP3-202ENST00000536708 POGZQ7Z3K3 1410 aa19.06■□□□□ 0.64
CDK5RAP3-202ENST00000536708 ATP7AQ04656 1500 aa19.06■□□□□ 0.64
CDK5RAP3-202ENST00000536708 FRMPD1Q5SYB0 1578 aa19.05■□□□□ 0.64
CDK5RAP3-202ENST00000536708 ANKRD30AQ9BXX3 1397 aa19.05■□□□□ 0.64
CDK5RAP3-202ENST00000536708 KIDINS220Q9ULH0 1771 aa19.05■□□□□ 0.64
CDK5RAP3-202ENST00000536708 KDM5CP41229 1560 aa19.05■□□□□ 0.64
CDK5RAP3-202ENST00000536708 TSPY4P0CV99 314 aa19.04■□□□□ 0.64
CDK5RAP3-202ENST00000536708 TSPY10P0CW01 314 aa19.04■□□□□ 0.64
CDK5RAP3-202ENST00000536708 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
CDK5RAP3-202ENST00000536708 ZNF518AQ6AHZ1 1483 aa19.04■□□□□ 0.64
CDK5RAP3-202ENST00000536708 DHX57Q6P158 1386 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP3-202ENST00000536708 HECW2Q9P2P5 1572 aa19.02■□□□□ 0.63
CDK5RAP3-202ENST00000536708 TEX14Q8IWB6 1497 aa19.01■□□□□ 0.63
CDK5RAP3-202ENST00000536708 RSPH4AQ5TD94 716 aa19.01■□□□□ 0.63
CDK5RAP3-202ENST00000536708 DIEXFQ68CQ4 756 aaKnown RBP18.99■□□□□ 0.63
CDK5RAP3-202ENST00000536708 ANKRD50Q9ULJ7 1429 aa18.99■□□□□ 0.63
CDK5RAP3-202ENST00000536708 SPAG9O60271 1321 aaKnown RBP18.99■□□□□ 0.63
CDK5RAP3-202ENST00000536708 DENND4BO75064 1496 aaPredicted RBP18.99■□□□□ 0.63
CDK5RAP3-202ENST00000536708 ABCA6Q8N139 1617 aa18.99■□□□□ 0.63
CDK5RAP3-202ENST00000536708 RAPGEF3O95398 923 aa18.98■□□□□ 0.63
CDK5RAP3-202ENST00000536708 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
CDK5RAP3-202ENST00000536708 CLSPNQ9HAW4 1339 aa18.97■□□□□ 0.63
CDK5RAP3-202ENST00000536708 DUOX2Q9NRD8 1548 aa18.96■□□□□ 0.63
CDK5RAP3-202ENST00000536708 RTEL1-TNFRSF6BF6WH68 1400 aa18.95■□□□□ 0.62
CDK5RAP3-202ENST00000536708 COL17A1Q9UMD9 1497 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-202ENST00000536708 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
CDK5RAP3-202ENST00000536708 DIP2CQ9Y2E4 1556 aa18.92■□□□□ 0.62
CDK5RAP3-202ENST00000536708 UNC13BO14795 1591 aa18.92■□□□□ 0.62
CDK5RAP3-202ENST00000536708 ZMYM4Q5VZL5 1548 aa18.92■□□□□ 0.62
CDK5RAP3-202ENST00000536708 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
CDK5RAP3-202ENST00000536708 MLH3Q9UHC1 1453 aa18.91■□□□□ 0.62
CDK5RAP3-202ENST00000536708 TRIM52Q96A61 297 aa18.9■□□□□ 0.62
CDK5RAP3-202ENST00000536708 ERBINQ96RT1 1412 aa18.89■□□□□ 0.62
CDK5RAP3-202ENST00000536708 YEATS2Q9ULM3 1422 aa18.89■□□□□ 0.62
CDK5RAP3-202ENST00000536708 PZPP20742 1482 aa18.89■□□□□ 0.61
CDK5RAP3-202ENST00000536708 EIF2AK4Q9P2K8 1649 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP3-202ENST00000536708 DEPDC5O75140 1603 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms