RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 HECW1Q76N89 1606 aa28.83■■■□□ 2.21
CCDC61-201ENST00000536603 ZMYM4Q5VZL5 1548 aa28.83■■■□□ 2.21
CCDC61-201ENST00000536603 LMTK3Q96Q04 1460 aa28.82■■■□□ 2.2
CCDC61-201ENST00000536603 YEATS2Q9ULM3 1422 aa28.8■■■□□ 2.2
CCDC61-201ENST00000536603 MLECQ14165 292 aa28.8■■■□□ 2.2
CCDC61-201ENST00000536603 CASKIN1Q8WXD9 1431 aa28.78■■■□□ 2.2
CCDC61-201ENST00000536603 SCAPERQ9BY12 1400 aa28.78■■■□□ 2.2
CCDC61-201ENST00000536603 MAGI2Q86UL8 1455 aa28.78■■■□□ 2.2
CCDC61-201ENST00000536603 PLCH2O75038 1416 aa28.77■■■□□ 2.2
CCDC61-201ENST00000536603 CDK11AQ9UQ88 783 aaPredicted RBP28.76■■■□□ 2.19
CCDC61-201ENST00000536603 SIGLEC1Q9BZZ2 1709 aa28.74■■■□□ 2.19
CCDC61-201ENST00000536603 MYO5CQ9NQX4 1742 aa28.74■■■□□ 2.19
CCDC61-201ENST00000536603 HSPA2P54652 639 aa28.73■■■□□ 2.19
CCDC61-201ENST00000536603 EFCAB2Q5VUJ9 269 aa28.72■■■□□ 2.19
CCDC61-201ENST00000536603 FER1L4A9Z1Z3 1794 aa28.72■■■□□ 2.19
CCDC61-201ENST00000536603 LRRIQ1Q96JM4 1722 aa28.69■■■□□ 2.18
CCDC61-201ENST00000536603 FYCO1Q9BQS8 1478 aa28.68■■■□□ 2.18
CCDC61-201ENST00000536603 MYT1LQ9UL68 1186 aa28.66■■■□□ 2.18
CCDC61-201ENST00000536603 KIF14Q15058 1648 aa28.65■■■□□ 2.18
CCDC61-201ENST00000536603 ATP10AO60312 1499 aa28.65■■■□□ 2.18
CCDC61-201ENST00000536603 CCDC18Q5T9S5 1454 aa28.64■■■□□ 2.17
CCDC61-201ENST00000536603 C9orf84Q5VXU9 1444 aa28.62■■■□□ 2.17
CCDC61-201ENST00000536603 ARHGAP5Q13017 1502 aa28.62■■■□□ 2.17
CCDC61-201ENST00000536603 TROQ12816 1431 aaPredicted RBP28.59■■■□□ 2.17
CCDC61-201ENST00000536603 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
CCDC61-201ENST00000536603 ARHGEF12Q9NZN5 1544 aa28.56■■■□□ 2.16
CCDC61-201ENST00000536603 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
CCDC61-201ENST00000536603 PREX1Q8TCU6 1659 aa28.52■■■□□ 2.16
CCDC61-201ENST00000536603 CEBPAP49715 358 aaPredicted RBP28.52■■■□□ 2.16
CCDC61-201ENST00000536603 VPS8Q8N3P4 1428 aa28.49■■■□□ 2.15
CCDC61-201ENST00000536603 KDM5CP41229 1560 aa28.49■■■□□ 2.15
CCDC61-201ENST00000536603 CDC42BPBQ9Y5S2 1711 aa28.49■■■□□ 2.15
CCDC61-201ENST00000536603 CERKQ8TCT0 537 aa28.47■■■□□ 2.15
CCDC61-201ENST00000536603 DIP2CQ9Y2E4 1556 aa28.44■■■□□ 2.14
CCDC61-201ENST00000536603 ESF1Q9H501 851 aaKnown RBP28.43■■■□□ 2.14
CCDC61-201ENST00000536603 PREX2Q70Z35 1606 aa28.42■■■□□ 2.14
CCDC61-201ENST00000536603 ABCA6Q8N139 1617 aa28.4■■■□□ 2.14
CCDC61-201ENST00000536603 MTUS2Q5JR59 1369 aa28.4■■■□□ 2.14
CCDC61-201ENST00000536603 UHRF1BP1Q6BDS2 1440 aa28.39■■■□□ 2.14
CCDC61-201ENST00000536603 MLH3Q9UHC1 1453 aa28.38■■■□□ 2.13
CCDC61-201ENST00000536603 REREQ9P2R6 1566 aa28.37■■■□□ 2.13
CCDC61-201ENST00000536603 DMRT2Q9Y5R5 561 aa28.37■■■□□ 2.13
CCDC61-201ENST00000536603 ITSN2Q9NZM3 1697 aa28.37■■■□□ 2.13
CCDC61-201ENST00000536603 ABCC1P33527 1531 aa28.37■■■□□ 2.13
CCDC61-201ENST00000536603 TRAPPC8Q9Y2L5 1435 aa28.36■■■□□ 2.13
CCDC61-201ENST00000536603 SETD1BQ9UPS6 1966 aaKnown RBP28.34■■■□□ 2.13
CCDC61-201ENST00000536603 CDC42BPAQ5VT25 1732 aa28.33■■■□□ 2.13
CCDC61-201ENST00000536603 ZNF777Q9ULD5 760 aaPredicted RBP28.33■■■□□ 2.13
CCDC61-201ENST00000536603 C3P01024 1663 aa28.32■■■□□ 2.12
CCDC61-201ENST00000536603 STRCQ7RTU9 1775 aa28.32■■■□□ 2.12
CCDC61-201ENST00000536603 TIAM1Q13009 1591 aa28.29■■■□□ 2.12
CCDC61-201ENST00000536603 AGLP35573 1532 aa28.29■■■□□ 2.12
CCDC61-201ENST00000536603 EHBP1L1Q8N3D4 1523 aa28.28■■■□□ 2.12
CCDC61-201ENST00000536603 KIDINS220Q9ULH0 1771 aa28.28■■■□□ 2.12
CCDC61-201ENST00000536603 APLP2Q06481 763 aa28.24■■■□□ 2.11
CCDC61-201ENST00000536603 CCNB3Q8WWL7 1395 aa28.24■■■□□ 2.11
CCDC61-201ENST00000536603 GPATCH8Q9UKJ3 1502 aaKnown RBP28.23■■■□□ 2.11
CCDC61-201ENST00000536603 KANK4Q5T7N3 995 aaPredicted RBP28.22■■■□□ 2.11
CCDC61-201ENST00000536603 CNTLNQ9NXG0 1405 aa28.21■■■□□ 2.11
CCDC61-201ENST00000536603 MAP3K1Q13233 1512 aa28.21■■■□□ 2.11
CCDC61-201ENST00000536603 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
CCDC61-201ENST00000536603 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.11
CCDC61-201ENST00000536603 SPAG9O60271 1321 aaKnown RBP28.19■■■□□ 2.1
CCDC61-201ENST00000536603 SYCP2Q9BX26 1530 aa28.19■■■□□ 2.1
CCDC61-201ENST00000536603 HNRNPMP52272 730 aaKnown RBP eCLIP28.19■■■□□ 2.1
CCDC61-201ENST00000536603 CFDP1Q9UEE9 299 aaPredicted RBP28.19■■■□□ 2.1
CCDC61-201ENST00000536603 SUPT6HQ7KZ85 1726 aaKnown RBP28.18■■■□□ 2.1
CCDC61-201ENST00000536603 PTPRTO14522 1441 aa28.16■■■□□ 2.1
CCDC61-201ENST00000536603 NCOA2Q15596 1464 aa28.15■■■□□ 2.1
CCDC61-201ENST00000536603 MROH2AA6NES4 1674 aa28.12■■■□□ 2.09
CCDC61-201ENST00000536603 ATP7AQ04656 1500 aa28.11■■■□□ 2.09
CCDC61-201ENST00000536603 PLEKHH2Q8IVE3 1493 aa28.09■■■□□ 2.09
CCDC61-201ENST00000536603 ZMYM3Q14202 1370 aa28.09■■■□□ 2.09
CCDC61-201ENST00000536603 NPATQ14207 1427 aa28.07■■■□□ 2.08
CCDC61-201ENST00000536603 CLTCQ00610 1675 aaKnown RBP28.07■■■□□ 2.08
CCDC61-201ENST00000536603 NCOA1Q15788 1441 aa28.06■■■□□ 2.08
CCDC61-201ENST00000536603 KIAA1107Q9UPP5 1409 aa28.06■■■□□ 2.08
CCDC61-201ENST00000536603 CAMSAP1Q5T5Y3 1602 aa28.05■■■□□ 2.08
CCDC61-201ENST00000536603 ZNF644Q9H582 1327 aaPredicted RBP28.05■■■□□ 2.08
CCDC61-201ENST00000536603 INO80Q9ULG1 1556 aaPredicted RBP28.04■■■□□ 2.08
CCDC61-201ENST00000536603 A2MP01023 1474 aa28.04■■■□□ 2.08
CCDC61-201ENST00000536603 DISP3Q9P2K9 1392 aa28.04■■■□□ 2.08
CCDC61-201ENST00000536603 GGT6Q6P531 493 aa28.04■■■□□ 2.08
CCDC61-201ENST00000536603 LTBP4Q8N2S1 1624 aa28■■■□□ 2.07
CCDC61-201ENST00000536603 PLXNC1O60486 1568 aa27.99■■■□□ 2.07
CCDC61-201ENST00000536603 NCKAP5LQ9HCH0 1330 aa27.98■■■□□ 2.07
CCDC61-201ENST00000536603 ADGBQ8N7X0 1667 aa27.97■■■□□ 2.07
CCDC61-201ENST00000536603 MYO3AQ8NEV4 1616 aa27.96■■■□□ 2.07
CCDC61-201ENST00000536603 IQSEC2Q5JU85 1478 aa27.93■■■□□ 2.06
CCDC61-201ENST00000536603 MYOM3Q5VTT5 1437 aa27.92■■■□□ 2.06
CCDC61-201ENST00000536603 ZNF142P52746 1687 aaPredicted RBP27.92■■■□□ 2.06
CCDC61-201ENST00000536603 PTPRKQ15262 1439 aa27.92■■■□□ 2.06
CCDC61-201ENST00000536603 CAMSAP2Q08AD1 1489 aa27.91■■■□□ 2.06
CCDC61-201ENST00000536603 CEP170BQ9Y4F5 1589 aaPredicted RBP27.9■■■□□ 2.06
CCDC61-201ENST00000536603 MBD5Q9P267 1494 aa27.9■■■□□ 2.06
CCDC61-201ENST00000536603 PPP6R1Q9UPN7 881 aa27.9■■■□□ 2.06
CCDC61-201ENST00000536603 PKD2Q13563 968 aa27.89■■■□□ 2.06
CCDC61-201ENST00000536603 ZNF335Q9H4Z2 1342 aaPredicted RBP27.88■■■□□ 2.05
CCDC61-201ENST00000536603 MIA2Q96PC5 1412 aa27.87■■■□□ 2.05
CCDC61-201ENST00000536603 ILDR2Q71H61 639 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms