RNA–Protein interactions for RNA: ENST00000536297.1

CLPB-207, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-207ENST00000536297 POGZQ7Z3K3 1410 aa13.98□□□□□ -0.17
CLPB-207ENST00000536297 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
CLPB-207ENST00000536297 HSPA2P54652 639 aa13.98□□□□□ -0.17
CLPB-207ENST00000536297 PLCH2O75038 1416 aa13.98□□□□□ -0.17
CLPB-207ENST00000536297 MAGI2Q86UL8 1455 aa13.96□□□□□ -0.17
CLPB-207ENST00000536297 FER1L4A9Z1Z3 1794 aa13.96□□□□□ -0.18
CLPB-207ENST00000536297 MYO5CQ9NQX4 1742 aa13.95□□□□□ -0.18
CLPB-207ENST00000536297 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
CLPB-207ENST00000536297 KIF14Q15058 1648 aa13.95□□□□□ -0.18
CLPB-207ENST00000536297 FMN1Q68DA7 1419 aa13.95□□□□□ -0.18
CLPB-207ENST00000536297 EFCAB2Q5VUJ9 269 aa13.93□□□□□ -0.18
CLPB-207ENST00000536297 ATP10AO60312 1499 aa13.92□□□□□ -0.18
CLPB-207ENST00000536297 LRRIQ1Q96JM4 1722 aa13.91□□□□□ -0.18
CLPB-207ENST00000536297 CDK11AQ9UQ88 783 aaPredicted RBP13.91□□□□□ -0.18
CLPB-207ENST00000536297 C9orf84Q5VXU9 1444 aa13.9□□□□□ -0.18
CLPB-207ENST00000536297 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.19
CLPB-207ENST00000536297 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.19
CLPB-207ENST00000536297 TROQ12816 1431 aaPredicted RBP13.89□□□□□ -0.19
CLPB-207ENST00000536297 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
CLPB-207ENST00000536297 AFAP1Q8N556 730 aa13.88□□□□□ -0.19
CLPB-207ENST00000536297 MYT1LQ9UL68 1186 aa13.88□□□□□ -0.19
CLPB-207ENST00000536297 CLIP1P30622 1438 aa13.87□□□□□ -0.19
CLPB-207ENST00000536297 ZNF518AQ6AHZ1 1483 aa13.87□□□□□ -0.19
CLPB-207ENST00000536297 PREX1Q8TCU6 1659 aa13.85□□□□□ -0.19
CLPB-207ENST00000536297 CDC42BPBQ9Y5S2 1711 aa13.85□□□□□ -0.19
CLPB-207ENST00000536297 KDM5CP41229 1560 aa13.85□□□□□ -0.19
CLPB-207ENST00000536297 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
CLPB-207ENST00000536297 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
CLPB-207ENST00000536297 ABCA6Q8N139 1617 aa13.82□□□□□ -0.2
CLPB-207ENST00000536297 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
CLPB-207ENST00000536297 TRAPPC8Q9Y2L5 1435 aa13.8□□□□□ -0.2
CLPB-207ENST00000536297 ABCC1P33527 1531 aa13.8□□□□□ -0.2
CLPB-207ENST00000536297 ITSN2Q9NZM3 1697 aa13.79□□□□□ -0.2
CLPB-207ENST00000536297 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
CLPB-207ENST00000536297 MLH3Q9UHC1 1453 aa13.79□□□□□ -0.2
CLPB-207ENST00000536297 STRCQ7RTU9 1775 aa13.78□□□□□ -0.2
CLPB-207ENST00000536297 CCDC18Q5T9S5 1454 aa13.78□□□□□ -0.2
CLPB-207ENST00000536297 REREQ9P2R6 1566 aa13.78□□□□□ -0.2
CLPB-207ENST00000536297 C3P01024 1663 aa13.78□□□□□ -0.2
CLPB-207ENST00000536297 CDC42BPAQ5VT25 1732 aa13.78□□□□□ -0.2
CLPB-207ENST00000536297 UHRF1BP1Q6BDS2 1440 aa13.77□□□□□ -0.21
CLPB-207ENST00000536297 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
CLPB-207ENST00000536297 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
CLPB-207ENST00000536297 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
CLPB-207ENST00000536297 AGLP35573 1532 aa13.74□□□□□ -0.21
CLPB-207ENST00000536297 SETD1BQ9UPS6 1966 aaKnown RBP13.73□□□□□ -0.21
CLPB-207ENST00000536297 DMRT2Q9Y5R5 561 aa13.73□□□□□ -0.21
CLPB-207ENST00000536297 FYCO1Q9BQS8 1478 aa13.73□□□□□ -0.21
CLPB-207ENST00000536297 SAMD9LQ8IVG5 1584 aa13.72□□□□□ -0.21
CLPB-207ENST00000536297 SYCP2Q9BX26 1530 aa13.71□□□□□ -0.21
CLPB-207ENST00000536297 HNRNPMP52272 730 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLPB-207ENST00000536297 SUPT6HQ7KZ85 1726 aaKnown RBP13.7□□□□□ -0.22
CLPB-207ENST00000536297 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
CLPB-207ENST00000536297 SPAG9O60271 1321 aaKnown RBP13.68□□□□□ -0.22
CLPB-207ENST00000536297 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
CLPB-207ENST00000536297 PTPRTO14522 1441 aa13.67□□□□□ -0.22
CLPB-207ENST00000536297 MROH2AA6NES4 1674 aa13.66□□□□□ -0.22
CLPB-207ENST00000536297 ATP7AQ04656 1500 aa13.65□□□□□ -0.22
CLPB-207ENST00000536297 CFDP1Q9UEE9 299 aaPredicted RBP13.65□□□□□ -0.22
CLPB-207ENST00000536297 CCNB3Q8WWL7 1395 aa13.65□□□□□ -0.22
CLPB-207ENST00000536297 CLTCQ00610 1675 aaKnown RBP13.65□□□□□ -0.22
CLPB-207ENST00000536297 NCOA1Q15788 1441 aa13.64□□□□□ -0.23
CLPB-207ENST00000536297 ZMYM3Q14202 1370 aa13.64□□□□□ -0.23
CLPB-207ENST00000536297 CAMSAP1Q5T5Y3 1602 aa13.64□□□□□ -0.23
CLPB-207ENST00000536297 INO80Q9ULG1 1556 aaPredicted RBP13.63□□□□□ -0.23
CLPB-207ENST00000536297 A2MP01023 1474 aa13.62□□□□□ -0.23
CLPB-207ENST00000536297 MTUS2Q5JR59 1369 aa13.62□□□□□ -0.23
CLPB-207ENST00000536297 DISP3Q9P2K9 1392 aa13.62□□□□□ -0.23
CLPB-207ENST00000536297 LTBP4Q8N2S1 1624 aa13.62□□□□□ -0.23
CLPB-207ENST00000536297 NPATQ14207 1427 aa13.62□□□□□ -0.23
CLPB-207ENST00000536297 KIAA1107Q9UPP5 1409 aa13.62□□□□□ -0.23
CLPB-207ENST00000536297 PLXNC1O60486 1568 aa13.62□□□□□ -0.23
CLPB-207ENST00000536297 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
CLPB-207ENST00000536297 GGT6Q6P531 493 aa13.61□□□□□ -0.23
CLPB-207ENST00000536297 ZNF644Q9H582 1327 aaPredicted RBP13.61□□□□□ -0.23
CLPB-207ENST00000536297 NCKAP5LQ9HCH0 1330 aa13.61□□□□□ -0.23
CLPB-207ENST00000536297 MYO3AQ8NEV4 1616 aa13.6□□□□□ -0.23
CLPB-207ENST00000536297 TIAM1Q13009 1591 aa13.59□□□□□ -0.23
CLPB-207ENST00000536297 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
CLPB-207ENST00000536297 ILDR2Q71H61 639 aa13.58□□□□□ -0.24
CLPB-207ENST00000536297 PTPRKQ15262 1439 aa13.57□□□□□ -0.24
CLPB-207ENST00000536297 ZNF142P52746 1687 aaPredicted RBP13.57□□□□□ -0.24
CLPB-207ENST00000536297 CEP170BQ9Y4F5 1589 aaPredicted RBP13.56□□□□□ -0.24
CLPB-207ENST00000536297 ZNF335Q9H4Z2 1342 aaPredicted RBP13.56□□□□□ -0.24
CLPB-207ENST00000536297 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
CLPB-207ENST00000536297 EHBP1L1Q8N3D4 1523 aa13.55□□□□□ -0.24
CLPB-207ENST00000536297 IQSEC2Q5JU85 1478 aa13.55□□□□□ -0.24
CLPB-207ENST00000536297 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
CLPB-207ENST00000536297 PKD2Q13563 968 aa13.53□□□□□ -0.24
CLPB-207ENST00000536297 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
CLPB-207ENST00000536297 CEP162Q5TB80 1403 aa13.52□□□□□ -0.25
CLPB-207ENST00000536297 TCOF1Q13428 1488 aaKnown RBP13.52□□□□□ -0.25
CLPB-207ENST00000536297 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
CLPB-207ENST00000536297 PPP6R1Q9UPN7 881 aa13.51□□□□□ -0.25
CLPB-207ENST00000536297 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
CLPB-207ENST00000536297 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
CLPB-207ENST00000536297 KIF3BO15066 747 aa13.5□□□□□ -0.25
CLPB-207ENST00000536297 DNMT1P26358 1616 aaKnown RBP13.5□□□□□ -0.25
CLPB-207ENST00000536297 A2ML1A8K2U0 1454 aa13.49□□□□□ -0.25
CLPB-207ENST00000536297 CAMSAP2Q08AD1 1489 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms