RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 DIP2BQ9P265 1576 aa17.54■□□□□ 0.4
CDCA3-206ENST00000536241 CDC42BPBQ9Y5S2 1711 aa17.53■□□□□ 0.4
CDCA3-206ENST00000536241 PCGF6Q9BYE7 350 aa17.53■□□□□ 0.4
CDCA3-206ENST00000536241 MYO5CQ9NQX4 1742 aa17.52■□□□□ 0.4
CDCA3-206ENST00000536241 ITGAEP38570 1179 aa17.51■□□□□ 0.39
CDCA3-206ENST00000536241 ARHGAP5Q13017 1502 aa17.51■□□□□ 0.39
CDCA3-206ENST00000536241 ITSN2Q9NZM3 1697 aa17.51■□□□□ 0.39
CDCA3-206ENST00000536241 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
CDCA3-206ENST00000536241 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
CDCA3-206ENST00000536241 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.39
CDCA3-206ENST00000536241 MAP3K4Q9Y6R4 1608 aa17.48■□□□□ 0.39
CDCA3-206ENST00000536241 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
CDCA3-206ENST00000536241 KIF13AQ9H1H9 1805 aa17.48■□□□□ 0.39
CDCA3-206ENST00000536241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.47■□□□□ 0.39
CDCA3-206ENST00000536241 FANCAO15360 1455 aa17.47■□□□□ 0.39
CDCA3-206ENST00000536241 CAMSAP2Q08AD1 1489 aa17.45■□□□□ 0.38
CDCA3-206ENST00000536241 ARAP3Q8WWN8 1544 aa17.45■□□□□ 0.38
CDCA3-206ENST00000536241 TSPOAP1O95153 1857 aa17.45■□□□□ 0.38
CDCA3-206ENST00000536241 SAMD9LQ8IVG5 1584 aa17.44■□□□□ 0.38
CDCA3-206ENST00000536241 AKNAQ7Z591 1439 aa17.43■□□□□ 0.38
CDCA3-206ENST00000536241 RSPH4AQ5TD94 716 aa17.41■□□□□ 0.38
CDCA3-206ENST00000536241 CHIC2Q9UKJ5 165 aa17.41■□□□□ 0.38
CDCA3-206ENST00000536241 ARHGEF12Q9NZN5 1544 aa17.4■□□□□ 0.38
CDCA3-206ENST00000536241 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
CDCA3-206ENST00000536241 KIAA1107Q9UPP5 1409 aa17.4■□□□□ 0.38
CDCA3-206ENST00000536241 PLEKHH2Q8IVE3 1493 aa17.39■□□□□ 0.38
CDCA3-206ENST00000536241 MBD5Q9P267 1494 aa17.39■□□□□ 0.38
CDCA3-206ENST00000536241 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
CDCA3-206ENST00000536241 NEO1Q92859 1461 aa17.39■□□□□ 0.37
CDCA3-206ENST00000536241 ABCC5O15440 1437 aa17.39■□□□□ 0.37
CDCA3-206ENST00000536241 PTPRKQ15262 1439 aa17.39■□□□□ 0.37
CDCA3-206ENST00000536241 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
CDCA3-206ENST00000536241 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
CDCA3-206ENST00000536241 ADGRL1O94910 1474 aa17.38■□□□□ 0.37
CDCA3-206ENST00000536241 PPRC1Q5VV67 1664 aaKnown RBP17.38■□□□□ 0.37
CDCA3-206ENST00000536241 DAPK1P53355 1430 aa17.37■□□□□ 0.37
CDCA3-206ENST00000536241 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
CDCA3-206ENST00000536241 TEX14Q8IWB6 1497 aa17.36■□□□□ 0.37
CDCA3-206ENST00000536241 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
CDCA3-206ENST00000536241 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
CDCA3-206ENST00000536241 ABCC1P33527 1531 aa17.35■□□□□ 0.37
CDCA3-206ENST00000536241 CFAP74Q9C0B2 1584 aa17.34■□□□□ 0.37
CDCA3-206ENST00000536241 DNMT1P26358 1616 aaKnown RBP17.34■□□□□ 0.37
CDCA3-206ENST00000536241 RRP7BPQ9NSQ0 103 aa17.33■□□□□ 0.37
CDCA3-206ENST00000536241 ARHGEF5Q12774 1597 aa17.33■□□□□ 0.36
CDCA3-206ENST00000536241 CCDC141Q6ZP82 1450 aa17.32■□□□□ 0.36
CDCA3-206ENST00000536241 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
CDCA3-206ENST00000536241 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
CDCA3-206ENST00000536241 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
CDCA3-206ENST00000536241 C9orf84Q5VXU9 1444 aa17.29■□□□□ 0.36
CDCA3-206ENST00000536241 COL17A1Q9UMD9 1497 aaPredicted RBP17.28■□□□□ 0.36
CDCA3-206ENST00000536241 NCOA1Q15788 1441 aa17.26■□□□□ 0.35
CDCA3-206ENST00000536241 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
CDCA3-206ENST00000536241 ZNF518AQ6AHZ1 1483 aa17.26■□□□□ 0.35
CDCA3-206ENST00000536241 ANKRD30AQ9BXX3 1397 aa17.26■□□□□ 0.35
CDCA3-206ENST00000536241 ROCK1Q13464 1354 aa17.25■□□□□ 0.35
CDCA3-206ENST00000536241 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
CDCA3-206ENST00000536241 CROCC2H7BZ55 1655 aa17.24■□□□□ 0.35
CDCA3-206ENST00000536241 RTEL1-TNFRSF6BF6WH68 1400 aa17.23■□□□□ 0.35
CDCA3-206ENST00000536241 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
CDCA3-206ENST00000536241 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
CDCA3-206ENST00000536241 RICTORQ6R327 1708 aa17.21■□□□□ 0.35
CDCA3-206ENST00000536241 NAIPQ13075 1403 aa17.21■□□□□ 0.35
CDCA3-206ENST00000536241 MAST1Q9Y2H9 1570 aa17.21■□□□□ 0.35
CDCA3-206ENST00000536241 HFM1A2PYH4 1435 aa17.2■□□□□ 0.34
CDCA3-206ENST00000536241 KDM5CP41229 1560 aa17.19■□□□□ 0.34
CDCA3-206ENST00000536241 KIF15Q9NS87 1388 aa17.19■□□□□ 0.34
CDCA3-206ENST00000536241 MLH3Q9UHC1 1453 aa17.19■□□□□ 0.34
CDCA3-206ENST00000536241 ADGBQ8N7X0 1667 aa17.18■□□□□ 0.34
CDCA3-206ENST00000536241 FRMPD1Q5SYB0 1578 aa17.18■□□□□ 0.34
CDCA3-206ENST00000536241 ATP7AQ04656 1500 aa17.18■□□□□ 0.34
CDCA3-206ENST00000536241 RAB3GAP2Q9H2M9 1393 aa17.18■□□□□ 0.34
CDCA3-206ENST00000536241 KIDINS220Q9ULH0 1771 aa17.17■□□□□ 0.34
CDCA3-206ENST00000536241 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
CDCA3-206ENST00000536241 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
CDCA3-206ENST00000536241 INO80Q9ULG1 1556 aaPredicted RBP17.15■□□□□ 0.34
CDCA3-206ENST00000536241 HRCP23327 699 aa17.15■□□□□ 0.34
CDCA3-206ENST00000536241 HECW2Q9P2P5 1572 aa17.14■□□□□ 0.34
CDCA3-206ENST00000536241 ANKRD50Q9ULJ7 1429 aa17.14■□□□□ 0.33
CDCA3-206ENST00000536241 KDM6BO15054 1643 aa17.14■□□□□ 0.33
CDCA3-206ENST00000536241 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
CDCA3-206ENST00000536241 ZMYM4Q5VZL5 1548 aa17.13■□□□□ 0.33
CDCA3-206ENST00000536241 MAGI2Q86UL8 1455 aa17.13■□□□□ 0.33
CDCA3-206ENST00000536241 PLXNC1O60486 1568 aa17.12■□□□□ 0.33
CDCA3-206ENST00000536241 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
CDCA3-206ENST00000536241 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
CDCA3-206ENST00000536241 GCC2Q8IWJ2 1684 aa17.1■□□□□ 0.33
CDCA3-206ENST00000536241 KIF3BO15066 747 aa17.1■□□□□ 0.33
CDCA3-206ENST00000536241 A2MP01023 1474 aa17.09■□□□□ 0.33
CDCA3-206ENST00000536241 ATP10AO60312 1499 aa17.08■□□□□ 0.32
CDCA3-206ENST00000536241 ABCA6Q8N139 1617 aa17.08■□□□□ 0.32
CDCA3-206ENST00000536241 DIP2CQ9Y2E4 1556 aa17.07■□□□□ 0.32
CDCA3-206ENST00000536241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.327e-9■■■□□ 17.5
CDCA3-206ENST00000536241 ERBINQ96RT1 1412 aa17.06■□□□□ 0.32
CDCA3-206ENST00000536241 GGT6Q6P531 493 aa17.04■□□□□ 0.32
CDCA3-206ENST00000536241 ACIN1Q9UKV3 1341 aaKnown RBP17.04■□□□□ 0.32
CDCA3-206ENST00000536241 NUP155O75694 1391 aa17.02■□□□□ 0.32
CDCA3-206ENST00000536241 MPHOSPH9Q99550 1183 aa17.01■□□□□ 0.31
CDCA3-206ENST00000536241 ARID4BQ4LE39 1312 aaPredicted RBP17■□□□□ 0.31
CDCA3-206ENST00000536241 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms