RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SCAPERQ9BY12 1400 aa21.42■■□□□ 1.02
TNFRSF1A-207ENST00000535958 MYO5CQ9NQX4 1742 aa21.42■■□□□ 1.02
TNFRSF1A-207ENST00000535958 YEATS2Q9ULM3 1422 aa21.41■■□□□ 1.02
TNFRSF1A-207ENST00000535958 FBXO41Q8TF61 875 aa21.41■■□□□ 1.02
TNFRSF1A-207ENST00000535958 KIF14Q15058 1648 aa21.4■■□□□ 1.02
TNFRSF1A-207ENST00000535958 MLECQ14165 292 aa21.39■■□□□ 1.01
TNFRSF1A-207ENST00000535958 FER1L4A9Z1Z3 1794 aa21.38■■□□□ 1.01
TNFRSF1A-207ENST00000535958 ARHGAP35Q9NRY4 1499 aa21.38■■□□□ 1.01
TNFRSF1A-207ENST00000535958 CLIP1P30622 1438 aa21.38■■□□□ 1.01
TNFRSF1A-207ENST00000535958 EFCAB2Q5VUJ9 269 aa21.37■■□□□ 1.01
TNFRSF1A-207ENST00000535958 ARHGAP5Q13017 1502 aa21.34■■□□□ 1.01
TNFRSF1A-207ENST00000535958 SIGLEC1Q9BZZ2 1709 aa21.33■■□□□ 1.01
TNFRSF1A-207ENST00000535958 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1.01
TNFRSF1A-207ENST00000535958 MYT1LQ9UL68 1186 aa21.33■■□□□ 1.01
TNFRSF1A-207ENST00000535958 ATP10AO60312 1499 aa21.32■■□□□ 1
TNFRSF1A-207ENST00000535958 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-207ENST00000535958 ZNF518AQ6AHZ1 1483 aa21.32■■□□□ 1
TNFRSF1A-207ENST00000535958 HSPA2P54652 639 aa21.3■■□□□ 1
TNFRSF1A-207ENST00000535958 ARHGEF12Q9NZN5 1544 aa21.26■□□□□ 0.99
TNFRSF1A-207ENST00000535958 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
TNFRSF1A-207ENST00000535958 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
TNFRSF1A-207ENST00000535958 KDM5CP41229 1560 aa21.23■□□□□ 0.99
TNFRSF1A-207ENST00000535958 PREX1Q8TCU6 1659 aa21.23■□□□□ 0.99
TNFRSF1A-207ENST00000535958 LRRIQ1Q96JM4 1722 aa21.23■□□□□ 0.99
TNFRSF1A-207ENST00000535958 PREX2Q70Z35 1606 aa21.2■□□□□ 0.98
TNFRSF1A-207ENST00000535958 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
TNFRSF1A-207ENST00000535958 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
TNFRSF1A-207ENST00000535958 CDC42BPBQ9Y5S2 1711 aa21.18■□□□□ 0.98
TNFRSF1A-207ENST00000535958 ESF1Q9H501 851 aaKnown RBP21.18■□□□□ 0.98
TNFRSF1A-207ENST00000535958 CASKIN1Q8WXD9 1431 aa21.18■□□□□ 0.98
TNFRSF1A-207ENST00000535958 REREQ9P2R6 1566 aa21.15■□□□□ 0.98
TNFRSF1A-207ENST00000535958 ABCC1P33527 1531 aa21.15■□□□□ 0.98
TNFRSF1A-207ENST00000535958 UHRF1BP1Q6BDS2 1440 aa21.15■□□□□ 0.98
TNFRSF1A-207ENST00000535958 ABCA6Q8N139 1617 aa21.15■□□□□ 0.98
TNFRSF1A-207ENST00000535958 MLH3Q9UHC1 1453 aa21.14■□□□□ 0.98
TNFRSF1A-207ENST00000535958 CEBPAP49715 358 aaPredicted RBP21.14■□□□□ 0.97
TNFRSF1A-207ENST00000535958 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
TNFRSF1A-207ENST00000535958 FYCO1Q9BQS8 1478 aa21.13■□□□□ 0.97
TNFRSF1A-207ENST00000535958 CERKQ8TCT0 537 aa21.11■□□□□ 0.97
TNFRSF1A-207ENST00000535958 DMRT2Q9Y5R5 561 aa21.1■□□□□ 0.97
TNFRSF1A-207ENST00000535958 TRAPPC8Q9Y2L5 1435 aa21.1■□□□□ 0.97
TNFRSF1A-207ENST00000535958 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
TNFRSF1A-207ENST00000535958 AGLP35573 1532 aa21.08■□□□□ 0.96
TNFRSF1A-207ENST00000535958 ZNF777Q9ULD5 760 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF1A-207ENST00000535958 C3P01024 1663 aa21.06■□□□□ 0.96
TNFRSF1A-207ENST00000535958 SETD1BQ9UPS6 1966 aaKnown RBP21.06■□□□□ 0.96
TNFRSF1A-207ENST00000535958 KIDINS220Q9ULH0 1771 aa21.04■□□□□ 0.96
TNFRSF1A-207ENST00000535958 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
TNFRSF1A-207ENST00000535958 SYCP2Q9BX26 1530 aa21.02■□□□□ 0.96
TNFRSF1A-207ENST00000535958 SAMD9LQ8IVG5 1584 aa21.01■□□□□ 0.95
TNFRSF1A-207ENST00000535958 STRCQ7RTU9 1775 aa21■□□□□ 0.95
TNFRSF1A-207ENST00000535958 SPAG9O60271 1321 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1A-207ENST00000535958 PLEKHH2Q8IVE3 1493 aa20.98■□□□□ 0.95
TNFRSF1A-207ENST00000535958 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
TNFRSF1A-207ENST00000535958 CCNB3Q8WWL7 1395 aa20.97■□□□□ 0.95
TNFRSF1A-207ENST00000535958 CFDP1Q9UEE9 299 aaPredicted RBP20.96■□□□□ 0.95
TNFRSF1A-207ENST00000535958 MTUS2Q5JR59 1369 aa20.96■□□□□ 0.95
TNFRSF1A-207ENST00000535958 SUPT6HQ7KZ85 1726 aaKnown RBP20.95■□□□□ 0.94
TNFRSF1A-207ENST00000535958 ATP7AQ04656 1500 aa20.95■□□□□ 0.94
TNFRSF1A-207ENST00000535958 MROH2AA6NES4 1674 aa20.95■□□□□ 0.94
TNFRSF1A-207ENST00000535958 PTPRTO14522 1441 aa20.95■□□□□ 0.94
TNFRSF1A-207ENST00000535958 HNRNPMP52272 730 aaKnown RBP eCLIP20.94■□□□□ 0.94
TNFRSF1A-207ENST00000535958 NPATQ14207 1427 aa20.91■□□□□ 0.94
TNFRSF1A-207ENST00000535958 INO80Q9ULG1 1556 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF1A-207ENST00000535958 KIAA1107Q9UPP5 1409 aa20.91■□□□□ 0.94
TNFRSF1A-207ENST00000535958 A2MP01023 1474 aa20.89■□□□□ 0.94
TNFRSF1A-207ENST00000535958 NCOA1Q15788 1441 aa20.88■□□□□ 0.93
TNFRSF1A-207ENST00000535958 CLTCQ00610 1675 aaKnown RBP20.88■□□□□ 0.93
TNFRSF1A-207ENST00000535958 EHBP1L1Q8N3D4 1523 aa20.88■□□□□ 0.93
TNFRSF1A-207ENST00000535958 ZMYM3Q14202 1370 aa20.87■□□□□ 0.93
TNFRSF1A-207ENST00000535958 PLXNC1O60486 1568 aa20.87■□□□□ 0.93
TNFRSF1A-207ENST00000535958 CAMSAP1Q5T5Y3 1602 aa20.86■□□□□ 0.93
TNFRSF1A-207ENST00000535958 ADGBQ8N7X0 1667 aa20.85■□□□□ 0.93
TNFRSF1A-207ENST00000535958 GGT6Q6P531 493 aa20.84■□□□□ 0.93
TNFRSF1A-207ENST00000535958 TIAM1Q13009 1591 aa20.83■□□□□ 0.92
TNFRSF1A-207ENST00000535958 MYO3AQ8NEV4 1616 aa20.82■□□□□ 0.92
TNFRSF1A-207ENST00000535958 ZNF142P52746 1687 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF1A-207ENST00000535958 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
TNFRSF1A-207ENST00000535958 IQSEC2Q5JU85 1478 aa20.8■□□□□ 0.92
TNFRSF1A-207ENST00000535958 LTBP4Q8N2S1 1624 aa20.79■□□□□ 0.92
TNFRSF1A-207ENST00000535958 CEP170BQ9Y4F5 1589 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1A-207ENST00000535958 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
TNFRSF1A-207ENST00000535958 PPP6R1Q9UPN7 881 aa20.77■□□□□ 0.92
TNFRSF1A-207ENST00000535958 PTPRKQ15262 1439 aa20.77■□□□□ 0.91
TNFRSF1A-207ENST00000535958 PLA2R1Q13018 1463 aa20.76■□□□□ 0.91
TNFRSF1A-207ENST00000535958 ZNF644Q9H582 1327 aaPredicted RBP20.76■□□□□ 0.91
TNFRSF1A-207ENST00000535958 NCKAP5LQ9HCH0 1330 aa20.76■□□□□ 0.91
TNFRSF1A-207ENST00000535958 PKD2Q13563 968 aa20.75■□□□□ 0.91
TNFRSF1A-207ENST00000535958 RTEL1-TNFRSF6BF6WH68 1400 aa20.75■□□□□ 0.91
TNFRSF1A-207ENST00000535958 CCDC141Q6ZP82 1450 aa20.73■□□□□ 0.91
TNFRSF1A-207ENST00000535958 MBD5Q9P267 1494 aa20.73■□□□□ 0.91
TNFRSF1A-207ENST00000535958 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
TNFRSF1A-207ENST00000535958 DHX29Q7Z478 1369 aaKnown RBP20.71■□□□□ 0.91
TNFRSF1A-207ENST00000535958 CAMSAP2Q08AD1 1489 aa20.7■□□□□ 0.9
TNFRSF1A-207ENST00000535958 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
TNFRSF1A-207ENST00000535958 ZNF335Q9H4Z2 1342 aaPredicted RBP20.69■□□□□ 0.9
TNFRSF1A-207ENST00000535958 A2ML1A8K2U0 1454 aa20.69■□□□□ 0.9
TNFRSF1A-207ENST00000535958 TCOF1Q13428 1488 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-207ENST00000535958 KDM5DQ9BY66 1539 aa20.68■□□□□ 0.9
TNFRSF1A-207ENST00000535958 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms