RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
CD4-204ENST00000535707 DIP2BQ9P265 1576 aa13.79□□□□□ -0.2
CD4-204ENST00000535707 ABCA9Q8IUA7 1624 aa13.79□□□□□ -0.2
CD4-204ENST00000535707 SUPT6HQ7KZ85 1726 aaKnown RBP13.77□□□□□ -0.21
CD4-204ENST00000535707 ARID3CA6NKF2 412 aa13.76□□□□□ -0.21
CD4-204ENST00000535707 ARAP3Q8WWN8 1544 aa13.75□□□□□ -0.21
CD4-204ENST00000535707 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
CD4-204ENST00000535707 MAP3K4Q9Y6R4 1608 aa13.74□□□□□ -0.21
CD4-204ENST00000535707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.74□□□□□ -0.21
CD4-204ENST00000535707 KIF13AQ9H1H9 1805 aa13.74□□□□□ -0.21
CD4-204ENST00000535707 KANK4Q5T7N3 995 aaPredicted RBP13.71□□□□□ -0.21
CD4-204ENST00000535707 NCOA2Q15596 1464 aa13.71□□□□□ -0.21
CD4-204ENST00000535707 ITSN2Q9NZM3 1697 aa13.7□□□□□ -0.22
CD4-204ENST00000535707 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
CD4-204ENST00000535707 MYO5CQ9NQX4 1742 aa13.7□□□□□ -0.22
CD4-204ENST00000535707 KCNH8Q96L42 1107 aa13.69□□□□□ -0.22
CD4-204ENST00000535707 PLCH2O75038 1416 aa13.69□□□□□ -0.22
CD4-204ENST00000535707 PREX2Q70Z35 1606 aa13.68□□□□□ -0.22
CD4-204ENST00000535707 CFAP74Q9C0B2 1584 aa13.68□□□□□ -0.22
CD4-204ENST00000535707 CD109Q6YHK3 1445 aa13.68□□□□□ -0.22
CD4-204ENST00000535707 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
CD4-204ENST00000535707 PHLDB1Q86UU1 1377 aa13.68□□□□□ -0.22
CD4-204ENST00000535707 TEX14Q8IWB6 1497 aa13.67□□□□□ -0.22
CD4-204ENST00000535707 GPATCH8Q9UKJ3 1502 aaKnown RBP13.67□□□□□ -0.22
CD4-204ENST00000535707 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
CD4-204ENST00000535707 MIA2Q96PC5 1412 aa13.66□□□□□ -0.22
CD4-204ENST00000535707 CCNB3Q8WWL7 1395 aa13.66□□□□□ -0.22
CD4-204ENST00000535707 NEO1Q92859 1461 aa13.65□□□□□ -0.22
CD4-204ENST00000535707 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
CD4-204ENST00000535707 CDC42BPBQ9Y5S2 1711 aa13.64□□□□□ -0.23
CD4-204ENST00000535707 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
CD4-204ENST00000535707 FANCAO15360 1455 aa13.61□□□□□ -0.23
CD4-204ENST00000535707 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
CD4-204ENST00000535707 ARHGAP5Q13017 1502 aa13.61□□□□□ -0.23
CD4-204ENST00000535707 EFCAB2Q5VUJ9 269 aa13.61□□□□□ -0.23
CD4-204ENST00000535707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.6□□□□□ -0.23
CD4-204ENST00000535707 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
CD4-204ENST00000535707 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
CD4-204ENST00000535707 KIAA1107Q9UPP5 1409 aa13.59□□□□□ -0.23
CD4-204ENST00000535707 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
CD4-204ENST00000535707 TCOF1Q13428 1488 aaKnown RBP13.58□□□□□ -0.24
CD4-204ENST00000535707 SAMD9LQ8IVG5 1584 aa13.57□□□□□ -0.24
CD4-204ENST00000535707 AKNAQ7Z591 1439 aa13.56□□□□□ -0.24
CD4-204ENST00000535707 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
CD4-204ENST00000535707 ABCC1P33527 1531 aa13.56□□□□□ -0.24
CD4-204ENST00000535707 PTPN23Q9H3S7 1636 aa13.56□□□□□ -0.24
CD4-204ENST00000535707 RSPH4AQ5TD94 716 aa13.55□□□□□ -0.24
CD4-204ENST00000535707 TSPOAP1O95153 1857 aa13.55□□□□□ -0.24
CD4-204ENST00000535707 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
CD4-204ENST00000535707 ADGRL1O94910 1474 aa13.54□□□□□ -0.24
CD4-204ENST00000535707 CAMSAP2Q08AD1 1489 aa13.54□□□□□ -0.24
CD4-204ENST00000535707 DENND4BO75064 1496 aaPredicted RBP13.51□□□□□ -0.25
CD4-204ENST00000535707 ZNF518AQ6AHZ1 1483 aa13.51□□□□□ -0.25
CD4-204ENST00000535707 MBD5Q9P267 1494 aa13.51□□□□□ -0.25
CD4-204ENST00000535707 POGZQ7Z3K3 1410 aa13.5□□□□□ -0.25
CD4-204ENST00000535707 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
CD4-204ENST00000535707 KDM5CP41229 1560 aa13.49□□□□□ -0.25
CD4-204ENST00000535707 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
CD4-204ENST00000535707 PPARGC1BQ86YN6 1023 aaKnown RBP13.49□□□□□ -0.25
CD4-204ENST00000535707 RICTORQ6R327 1708 aa13.49□□□□□ -0.25
CD4-204ENST00000535707 DNMT1P26358 1616 aaKnown RBP13.49□□□□□ -0.25
CD4-204ENST00000535707 ZMYM4Q5VZL5 1548 aa13.49□□□□□ -0.25
CD4-204ENST00000535707 ARHGEF12Q9NZN5 1544 aa13.49□□□□□ -0.25
CD4-204ENST00000535707 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
CD4-204ENST00000535707 MAGI2Q86UL8 1455 aa13.48□□□□□ -0.25
CD4-204ENST00000535707 SHANK2Q9UPX8 1470 aa13.48□□□□□ -0.25
CD4-204ENST00000535707 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
CD4-204ENST00000535707 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
CD4-204ENST00000535707 KDM6BO15054 1643 aa13.48□□□□□ -0.25
CD4-204ENST00000535707 MAST1Q9Y2H9 1570 aa13.48□□□□□ -0.25
CD4-204ENST00000535707 ZNF777Q9ULD5 760 aaPredicted RBP13.47□□□□□ -0.25
CD4-204ENST00000535707 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
CD4-204ENST00000535707 FRMPD1Q5SYB0 1578 aa13.46□□□□□ -0.25
CD4-204ENST00000535707 MLH3Q9UHC1 1453 aa13.46□□□□□ -0.25
CD4-204ENST00000535707 CROCC2H7BZ55 1655 aa13.46□□□□□ -0.26
CD4-204ENST00000535707 ZNF644Q9H582 1327 aaPredicted RBP13.45□□□□□ -0.26
CD4-204ENST00000535707 DAPK1P53355 1430 aa13.45□□□□□ -0.26
CD4-204ENST00000535707 COL17A1Q9UMD9 1497 aaPredicted RBP13.44□□□□□ -0.26
CD4-204ENST00000535707 TRAPPC8Q9Y2L5 1435 aa13.44□□□□□ -0.26
CD4-204ENST00000535707 INO80Q9ULG1 1556 aaPredicted RBP13.44□□□□□ -0.26
CD4-204ENST00000535707 ABCC5O15440 1437 aa13.43□□□□□ -0.26
CD4-204ENST00000535707 HECW2Q9P2P5 1572 aa13.43□□□□□ -0.26
CD4-204ENST00000535707 TSPY4P0CV99 314 aa13.42□□□□□ -0.26
CD4-204ENST00000535707 TSPY10P0CW01 314 aa13.42□□□□□ -0.26
CD4-204ENST00000535707 HNRNPMP52272 730 aaKnown RBP eCLIP13.42□□□□□ -0.26
CD4-204ENST00000535707 ADGRL2O95490 1459 aa13.42□□□□□ -0.26
CD4-204ENST00000535707 PLXNC1O60486 1568 aa13.41□□□□□ -0.26
CD4-204ENST00000535707 ZFYVE16Q7Z3T8 1539 aa13.41□□□□□ -0.26
CD4-204ENST00000535707 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
CD4-204ENST00000535707 ROCK1Q13464 1354 aa13.41□□□□□ -0.26
CD4-204ENST00000535707 ATP7AQ04656 1500 aa13.4□□□□□ -0.26
CD4-204ENST00000535707 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
CD4-204ENST00000535707 ADGBQ8N7X0 1667 aa13.4□□□□□ -0.26
CD4-204ENST00000535707 C9orf84Q5VXU9 1444 aa13.39□□□□□ -0.27
CD4-204ENST00000535707 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
CD4-204ENST00000535707 KIDINS220Q9ULH0 1771 aa13.38□□□□□ -0.27
CD4-204ENST00000535707 RAPGEF3O95398 923 aa13.38□□□□□ -0.27
CD4-204ENST00000535707 AFAP1Q8N556 730 aa13.38□□□□□ -0.27
CD4-204ENST00000535707 ARHGEF40Q8TER5 1519 aa13.38□□□□□ -0.27
CD4-204ENST00000535707 ANKRD30AQ9BXX3 1397 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms