RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 PREX2Q70Z35 1606 aa20.44■□□□□ 0.86
CCS-209ENST00000534763 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
CCS-209ENST00000534763 SCAPERQ9BY12 1400 aa20.42■□□□□ 0.86
CCS-209ENST00000534763 GPATCH8Q9UKJ3 1502 aaKnown RBP20.42■□□□□ 0.86
CCS-209ENST00000534763 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
CCS-209ENST00000534763 RICTORQ6R327 1708 aa20.4■□□□□ 0.86
CCS-209ENST00000534763 POGZQ7Z3K3 1410 aa20.4■□□□□ 0.86
CCS-209ENST00000534763 MAGI2Q86UL8 1455 aa20.4■□□□□ 0.86
CCS-209ENST00000534763 CDC42BPBQ9Y5S2 1711 aa20.4■□□□□ 0.86
CCS-209ENST00000534763 CCNB3Q8WWL7 1395 aa20.39■□□□□ 0.85
CCS-209ENST00000534763 CDC42BPAQ5VT25 1732 aa20.38■□□□□ 0.85
CCS-209ENST00000534763 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
CCS-209ENST00000534763 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
CCS-209ENST00000534763 ABCC1P33527 1531 aa20.34■□□□□ 0.85
CCS-209ENST00000534763 CFDP1Q9UEE9 299 aaPredicted RBP20.34■□□□□ 0.85
CCS-209ENST00000534763 SUPT6HQ7KZ85 1726 aaKnown RBP20.33■□□□□ 0.85
CCS-209ENST00000534763 NCOA2Q15596 1464 aa20.33■□□□□ 0.85
CCS-209ENST00000534763 PLEKHH2Q8IVE3 1493 aa20.33■□□□□ 0.85
CCS-209ENST00000534763 KIAA1107Q9UPP5 1409 aa20.33■□□□□ 0.84
CCS-209ENST00000534763 APLP2Q06481 763 aa20.32■□□□□ 0.84
CCS-209ENST00000534763 KDM5CP41229 1560 aa20.32■□□□□ 0.84
CCS-209ENST00000534763 ARHGEF40Q8TER5 1519 aa20.32■□□□□ 0.84
CCS-209ENST00000534763 ITSN2Q9NZM3 1697 aa20.3■□□□□ 0.84
CCS-209ENST00000534763 KDM4FA0A1W2PPD8 638 aa20.3■□□□□ 0.84
CCS-209ENST00000534763 ZFYVE16Q7Z3T8 1539 aa20.29■□□□□ 0.84
CCS-209ENST00000534763 ARHGEF12Q9NZN5 1544 aa20.29■□□□□ 0.84
CCS-209ENST00000534763 SAMD9LQ8IVG5 1584 aa20.29■□□□□ 0.84
CCS-209ENST00000534763 KANK4Q5T7N3 995 aaPredicted RBP20.28■□□□□ 0.84
CCS-209ENST00000534763 AFAP1Q8N556 730 aa20.28■□□□□ 0.84
CCS-209ENST00000534763 MLH3Q9UHC1 1453 aa20.28■□□□□ 0.84
CCS-209ENST00000534763 TRAPPC8Q9Y2L5 1435 aa20.27■□□□□ 0.83
CCS-209ENST00000534763 AEBP2Q6ZN18 517 aaPredicted RBP20.26■□□□□ 0.83
CCS-209ENST00000534763 ZNF777Q9ULD5 760 aaPredicted RBP20.26■□□□□ 0.83
CCS-209ENST00000534763 YEATS2Q9ULM3 1422 aa20.25■□□□□ 0.83
CCS-209ENST00000534763 HECW2Q9P2P5 1572 aa20.23■□□□□ 0.83
CCS-209ENST00000534763 ATP10AO60312 1499 aa20.23■□□□□ 0.83
CCS-209ENST00000534763 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
CCS-209ENST00000534763 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
CCS-209ENST00000534763 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
CCS-209ENST00000534763 MIA2Q96PC5 1412 aa20.2■□□□□ 0.82
CCS-209ENST00000534763 MBD5Q9P267 1494 aa20.2■□□□□ 0.82
CCS-209ENST00000534763 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
CCS-209ENST00000534763 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
CCS-209ENST00000534763 REREQ9P2R6 1566 aa20.18■□□□□ 0.82
CCS-209ENST00000534763 ZNF644Q9H582 1327 aaPredicted RBP20.18■□□□□ 0.82
CCS-209ENST00000534763 SPAG9O60271 1321 aaKnown RBP20.17■□□□□ 0.82
CCS-209ENST00000534763 ARID4BQ4LE39 1312 aaPredicted RBP20.16■□□□□ 0.82
CCS-209ENST00000534763 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
CCS-209ENST00000534763 DIP2CQ9Y2E4 1556 aa20.15■□□□□ 0.82
CCS-209ENST00000534763 RTEL1-TNFRSF6BF6WH68 1400 aa20.14■□□□□ 0.81
CCS-209ENST00000534763 MYT1LQ9UL68 1186 aa20.14■□□□□ 0.81
CCS-209ENST00000534763 KIDINS220Q9ULH0 1771 aa20.13■□□□□ 0.81
CCS-209ENST00000534763 BCORL1Q5H9F3 1711 aa20.13■□□□□ 0.81
CCS-209ENST00000534763 ADAMTSL3P82987 1691 aa20.13■□□□□ 0.81
CCS-209ENST00000534763 ABCA6Q8N139 1617 aa20.12■□□□□ 0.81
CCS-209ENST00000534763 ARHGEF5Q12774 1597 aa20.12■□□□□ 0.81
CCS-209ENST00000534763 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
CCS-209ENST00000534763 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
CCS-209ENST00000534763 CCDC141Q6ZP82 1450 aa20.11■□□□□ 0.81
CCS-209ENST00000534763 AGLP35573 1532 aa20.11■□□□□ 0.81
CCS-209ENST00000534763 SIGLEC1Q9BZZ2 1709 aa20.09■□□□□ 0.81
CCS-209ENST00000534763 FGD6Q6ZV73 1430 aa20.06■□□□□ 0.8
CCS-209ENST00000534763 TSPY4P0CV99 314 aa20.05■□□□□ 0.8
CCS-209ENST00000534763 TSPY10P0CW01 314 aa20.05■□□□□ 0.8
CCS-209ENST00000534763 PTPRMP28827 1452 aa20.04■□□□□ 0.8
CCS-209ENST00000534763 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
CCS-209ENST00000534763 A2MP01023 1474 aa20.03■□□□□ 0.8
CCS-209ENST00000534763 PLXNC1O60486 1568 aa20.03■□□□□ 0.8
CCS-209ENST00000534763 MADDQ8WXG6 1647 aa20.02■□□□□ 0.8
CCS-209ENST00000534763 PTPN23Q9H3S7 1636 aa20.02■□□□□ 0.79
CCS-209ENST00000534763 MAST1Q9Y2H9 1570 aa20.01■□□□□ 0.79
CCS-209ENST00000534763 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
CCS-209ENST00000534763 DHX29Q7Z478 1369 aaKnown RBP19.99■□□□□ 0.79
CCS-209ENST00000534763 MLECQ14165 292 aa19.98■□□□□ 0.79
CCS-209ENST00000534763 SHANK2Q9UPX8 1470 aa19.98■□□□□ 0.79
CCS-209ENST00000534763 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
CCS-209ENST00000534763 ABCC5O15440 1437 aa19.95■□□□□ 0.78
CCS-209ENST00000534763 RIMS1Q86UR5 1692 aaKnown RBP19.94■□□□□ 0.78
CCS-209ENST00000534763 FER1L4A9Z1Z3 1794 aa19.94■□□□□ 0.78
CCS-209ENST00000534763 DAPK1P53355 1430 aa19.93■□□□□ 0.78
CCS-209ENST00000534763 CNTLNQ9NXG0 1405 aa19.93■□□□□ 0.78
CCS-209ENST00000534763 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
CCS-209ENST00000534763 ESF1Q9H501 851 aaKnown RBP19.91■□□□□ 0.78
CCS-209ENST00000534763 CROCC2H7BZ55 1655 aa19.89■□□□□ 0.77
CCS-209ENST00000534763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.89■□□□□ 0.77
CCS-209ENST00000534763 FAM135AQ9P2D6 1515 aa19.87■□□□□ 0.77
CCS-209ENST00000534763 DUOX2Q9NRD8 1548 aa19.86■□□□□ 0.77
CCS-209ENST00000534763 KIF3BO15066 747 aa19.85■□□□□ 0.77
CCS-209ENST00000534763 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
CCS-209ENST00000534763 GGT6Q6P531 493 aa19.85■□□□□ 0.77
CCS-209ENST00000534763 ANKRD30AQ9BXX3 1397 aa19.84■□□□□ 0.77
CCS-209ENST00000534763 KIF15Q9NS87 1388 aa19.84■□□□□ 0.77
CCS-209ENST00000534763 ADGRL2O95490 1459 aa19.84■□□□□ 0.77
CCS-209ENST00000534763 MROH2AA6NES4 1674 aa19.84■□□□□ 0.77
CCS-209ENST00000534763 EIF2AK4Q9P2K8 1649 aaKnown RBP19.84■□□□□ 0.77
CCS-209ENST00000534763 NCOA1Q15788 1441 aa19.83■□□□□ 0.76
CCS-209ENST00000534763 ERBINQ96RT1 1412 aa19.83■□□□□ 0.76
CCS-209ENST00000534763 ZMYM3Q14202 1370 aa19.82■□□□□ 0.76
CCS-209ENST00000534763 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
CCS-209ENST00000534763 RNF17Q9BXT8 1623 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms