RNA–Protein interactions for RNA: ENST00000534516.2

NCAM1-218, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 3

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-218ENST00000534516 TTC37Q6PGP7 1564 aa14.16□□□□□ -0.14
NCAM1-218ENST00000534516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.14
NCAM1-218ENST00000534516 KIF14Q15058 1648 aa14.12□□□□□ -0.15
NCAM1-218ENST00000534516 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
NCAM1-218ENST00000534516 ARAP3Q8WWN8 1544 aa14.1□□□□□ -0.15
NCAM1-218ENST00000534516 CEP162Q5TB80 1403 aa14.09□□□□□ -0.15
NCAM1-218ENST00000534516 KDM4FA0A1W2PPD8 638 aa14.08□□□□□ -0.16
NCAM1-218ENST00000534516 RAPGEF3O95398 923 aa14.08□□□□□ -0.16
NCAM1-218ENST00000534516 FRMPD1Q5SYB0 1578 aa14.07□□□□□ -0.16
NCAM1-218ENST00000534516 TROQ12816 1431 aaPredicted RBP14.07□□□□□ -0.16
NCAM1-218ENST00000534516 NEO1Q92859 1461 aa14.06□□□□□ -0.16
NCAM1-218ENST00000534516 FYCO1Q9BQS8 1478 aa14.06□□□□□ -0.16
NCAM1-218ENST00000534516 FANCAO15360 1455 aa14.06□□□□□ -0.16
NCAM1-218ENST00000534516 MYO5CQ9NQX4 1742 aa14.05□□□□□ -0.16
NCAM1-218ENST00000534516 CCDC18Q5T9S5 1454 aa14.05□□□□□ -0.16
NCAM1-218ENST00000534516 CDK11AQ9UQ88 783 aaPredicted RBP14.04□□□□□ -0.16
NCAM1-218ENST00000534516 AKNAQ7Z591 1439 aa14.04□□□□□ -0.16
NCAM1-218ENST00000534516 RICTORQ6R327 1708 aa14.04□□□□□ -0.16
NCAM1-218ENST00000534516 PLCH2O75038 1416 aa14.03□□□□□ -0.16
NCAM1-218ENST00000534516 PHLDB1Q86UU1 1377 aa14.02□□□□□ -0.17
NCAM1-218ENST00000534516 CDC42BPBQ9Y5S2 1711 aa14.01□□□□□ -0.17
NCAM1-218ENST00000534516 CFAP74Q9C0B2 1584 aa14.01□□□□□ -0.17
NCAM1-218ENST00000534516 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
NCAM1-218ENST00000534516 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
NCAM1-218ENST00000534516 SLC4A1APQ9BWU0 796 aaKnown RBP13.99□□□□□ -0.17
NCAM1-218ENST00000534516 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
NCAM1-218ENST00000534516 CDC42BPAQ5VT25 1732 aa13.98□□□□□ -0.17
NCAM1-218ENST00000534516 ARHGAP5Q13017 1502 aa13.97□□□□□ -0.17
NCAM1-218ENST00000534516 CAPN15O75808 1086 aa13.97□□□□□ -0.17
NCAM1-218ENST00000534516 SCAPERQ9BY12 1400 aa13.97□□□□□ -0.17
NCAM1-218ENST00000534516 PREX2Q70Z35 1606 aa13.97□□□□□ -0.17
NCAM1-218ENST00000534516 SIGLEC1Q9BZZ2 1709 aa13.95□□□□□ -0.18
NCAM1-218ENST00000534516 EFCAB2Q5VUJ9 269 aa13.95□□□□□ -0.18
NCAM1-218ENST00000534516 YEATS2Q9ULM3 1422 aa13.94□□□□□ -0.18
NCAM1-218ENST00000534516 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
NCAM1-218ENST00000534516 ZMYM4Q5VZL5 1548 aa13.93□□□□□ -0.18
NCAM1-218ENST00000534516 ARHGEF12Q9NZN5 1544 aa13.93□□□□□ -0.18
NCAM1-218ENST00000534516 ARHGEF40Q8TER5 1519 aa13.92□□□□□ -0.18
NCAM1-218ENST00000534516 GPATCH8Q9UKJ3 1502 aaKnown RBP13.92□□□□□ -0.18
NCAM1-218ENST00000534516 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
NCAM1-218ENST00000534516 AFAP1Q8N556 730 aa13.9□□□□□ -0.18
NCAM1-218ENST00000534516 MTUS2Q5JR59 1369 aa13.9□□□□□ -0.18
NCAM1-218ENST00000534516 SAMD9LQ8IVG5 1584 aa13.9□□□□□ -0.18
NCAM1-218ENST00000534516 ITSN2Q9NZM3 1697 aa13.9□□□□□ -0.18
NCAM1-218ENST00000534516 ABCC1P33527 1531 aa13.9□□□□□ -0.19
NCAM1-218ENST00000534516 ZFYVE16Q7Z3T8 1539 aa13.9□□□□□ -0.19
NCAM1-218ENST00000534516 EHBP1L1Q8N3D4 1523 aa13.89□□□□□ -0.19
NCAM1-218ENST00000534516 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
NCAM1-218ENST00000534516 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
NCAM1-218ENST00000534516 ZNF777Q9ULD5 760 aaPredicted RBP13.88□□□□□ -0.19
NCAM1-218ENST00000534516 ADAMTSL3P82987 1691 aa13.88□□□□□ -0.19
NCAM1-218ENST00000534516 BCORL1Q5H9F3 1711 aa13.87□□□□□ -0.19
NCAM1-218ENST00000534516 KDM5CP41229 1560 aa13.87□□□□□ -0.19
NCAM1-218ENST00000534516 ARID4BQ4LE39 1312 aaPredicted RBP13.86□□□□□ -0.19
NCAM1-218ENST00000534516 CCNB3Q8WWL7 1395 aa13.85□□□□□ -0.19
NCAM1-218ENST00000534516 ZNF518AQ6AHZ1 1483 aa13.85□□□□□ -0.19
NCAM1-218ENST00000534516 MAGI2Q86UL8 1455 aa13.85□□□□□ -0.19
NCAM1-218ENST00000534516 SYCP2Q9BX26 1530 aa13.85□□□□□ -0.19
NCAM1-218ENST00000534516 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
NCAM1-218ENST00000534516 HNRNPMP52272 730 aaKnown RBP eCLIP13.84□□□□□ -0.19
NCAM1-218ENST00000534516 APLP2Q06481 763 aa13.84□□□□□ -0.19
NCAM1-218ENST00000534516 KANK4Q5T7N3 995 aaPredicted RBP13.84□□□□□ -0.19
NCAM1-218ENST00000534516 ZNF644Q9H582 1327 aaPredicted RBP13.84□□□□□ -0.19
NCAM1-218ENST00000534516 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.19
NCAM1-218ENST00000534516 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
NCAM1-218ENST00000534516 NCOA2Q15596 1464 aa13.83□□□□□ -0.2
NCAM1-218ENST00000534516 DSG3P32926 999 aa13.83□□□□□ -0.2
NCAM1-218ENST00000534516 CFDP1Q9UEE9 299 aaPredicted RBP13.83□□□□□ -0.2
NCAM1-218ENST00000534516 SUPT6HQ7KZ85 1726 aaKnown RBP13.83□□□□□ -0.2
NCAM1-218ENST00000534516 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
NCAM1-218ENST00000534516 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.2
NCAM1-218ENST00000534516 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
NCAM1-218ENST00000534516 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
NCAM1-218ENST00000534516 ATP10AO60312 1499 aa13.81□□□□□ -0.2
NCAM1-218ENST00000534516 MLECQ14165 292 aa13.81□□□□□ -0.2
NCAM1-218ENST00000534516 MYT1LQ9UL68 1186 aa13.81□□□□□ -0.2
NCAM1-218ENST00000534516 RIMS1Q86UR5 1692 aaKnown RBP13.81□□□□□ -0.2
NCAM1-218ENST00000534516 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
NCAM1-218ENST00000534516 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
NCAM1-218ENST00000534516 C9orf84Q5VXU9 1444 aa13.79□□□□□ -0.2
NCAM1-218ENST00000534516 PTPRMP28827 1452 aa13.79□□□□□ -0.2
NCAM1-218ENST00000534516 MAP3K1Q13233 1512 aa13.78□□□□□ -0.2
NCAM1-218ENST00000534516 KIAA1107Q9UPP5 1409 aa13.77□□□□□ -0.21
NCAM1-218ENST00000534516 FER1L4A9Z1Z3 1794 aa13.76□□□□□ -0.21
NCAM1-218ENST00000534516 MBD5Q9P267 1494 aa13.75□□□□□ -0.21
NCAM1-218ENST00000534516 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
NCAM1-218ENST00000534516 INO80Q9ULG1 1556 aaPredicted RBP13.75□□□□□ -0.21
NCAM1-218ENST00000534516 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
NCAM1-218ENST00000534516 PLEKHH2Q8IVE3 1493 aa13.74□□□□□ -0.21
NCAM1-218ENST00000534516 SPAG9O60271 1321 aaKnown RBP13.74□□□□□ -0.21
NCAM1-218ENST00000534516 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
NCAM1-218ENST00000534516 REREQ9P2R6 1566 aa13.74□□□□□ -0.21
NCAM1-218ENST00000534516 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
NCAM1-218ENST00000534516 AGLP35573 1532 aa13.69□□□□□ -0.22
NCAM1-218ENST00000534516 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
NCAM1-218ENST00000534516 ADGBQ8N7X0 1667 aa13.69□□□□□ -0.22
NCAM1-218ENST00000534516 PLXNC1O60486 1568 aa13.68□□□□□ -0.22
NCAM1-218ENST00000534516 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
NCAM1-218ENST00000534516 CCDC141Q6ZP82 1450 aa13.67□□□□□ -0.22
NCAM1-218ENST00000534516 ABCB7O75027 752 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms