RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 EFCAB2Q5VUJ9 269 aa13.96□□□□□ -0.17
RTL1-201ENST00000534062 ARHGAP5Q13017 1502 aa13.96□□□□□ -0.17
RTL1-201ENST00000534062 ZCCHC11Q5TAX3 1644 aaKnown RBP13.96□□□□□ -0.18
RTL1-201ENST00000534062 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
RTL1-201ENST00000534062 UHRF1BP1LA0JNW5 1464 aa13.95□□□□□ -0.18
RTL1-201ENST00000534062 KDM5BQ9UGL1 1544 aa13.95□□□□□ -0.18
RTL1-201ENST00000534062 ADCY10Q96PN6 1610 aa13.95□□□□□ -0.18
RTL1-201ENST00000534062 ASXL2Q76L83 1435 aa13.94□□□□□ -0.18
RTL1-201ENST00000534062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.94□□□□□ -0.18
RTL1-201ENST00000534062 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
RTL1-201ENST00000534062 WDR7Q9Y4E6 1490 aa13.91□□□□□ -0.18
RTL1-201ENST00000534062 DAPK1P53355 1430 aa13.91□□□□□ -0.18
RTL1-201ENST00000534062 ITSN2Q9NZM3 1697 aa13.91□□□□□ -0.18
RTL1-201ENST00000534062 ABCC10Q5T3U5 1492 aa13.9□□□□□ -0.18
RTL1-201ENST00000534062 ABCC5O15440 1437 aa13.89□□□□□ -0.19
RTL1-201ENST00000534062 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
RTL1-201ENST00000534062 TCOF1Q13428 1488 aaKnown RBP13.89□□□□□ -0.19
RTL1-201ENST00000534062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.88□□□□□ -0.19
RTL1-201ENST00000534062 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
RTL1-201ENST00000534062 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
RTL1-201ENST00000534062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
RTL1-201ENST00000534062 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
RTL1-201ENST00000534062 RIMBP3CA6NJZ7 1639 aa13.88□□□□□ -0.19
RTL1-201ENST00000534062 RIMBP3BA6NNM3 1639 aa13.88□□□□□ -0.19
RTL1-201ENST00000534062 RIMBP3Q9UFD9 1639 aa13.88□□□□□ -0.19
RTL1-201ENST00000534062 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
RTL1-201ENST00000534062 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
RTL1-201ENST00000534062 AFAP1Q8N556 730 aa13.86□□□□□ -0.19
RTL1-201ENST00000534062 NAIPQ13075 1403 aa13.86□□□□□ -0.19
RTL1-201ENST00000534062 CDC42BPAQ5VT25 1732 aa13.86□□□□□ -0.19
RTL1-201ENST00000534062 HFM1A2PYH4 1435 aa13.85□□□□□ -0.19
RTL1-201ENST00000534062 SIN3AQ96ST3 1273 aa13.85□□□□□ -0.19
RTL1-201ENST00000534062 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
RTL1-201ENST00000534062 FOXD1Q16676 465 aa13.84□□□□□ -0.19
RTL1-201ENST00000534062 PLCH2O75038 1416 aa13.84□□□□□ -0.19
RTL1-201ENST00000534062 C9orf84Q5VXU9 1444 aa13.83□□□□□ -0.19
RTL1-201ENST00000534062 RSPH4AQ5TD94 716 aa13.83□□□□□ -0.2
RTL1-201ENST00000534062 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.2
RTL1-201ENST00000534062 CD109Q6YHK3 1445 aa13.83□□□□□ -0.2
RTL1-201ENST00000534062 SYCP2Q9BX26 1530 aa13.82□□□□□ -0.2
RTL1-201ENST00000534062 FANCAO15360 1455 aa13.81□□□□□ -0.2
RTL1-201ENST00000534062 MYO5CQ9NQX4 1742 aa13.81□□□□□ -0.2
RTL1-201ENST00000534062 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
RTL1-201ENST00000534062 DNMT1P26358 1616 aaKnown RBP13.8□□□□□ -0.2
RTL1-201ENST00000534062 AKNAQ7Z591 1439 aa13.8□□□□□ -0.2
RTL1-201ENST00000534062 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
RTL1-201ENST00000534062 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
RTL1-201ENST00000534062 PREX2Q70Z35 1606 aa13.79□□□□□ -0.2
RTL1-201ENST00000534062 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
RTL1-201ENST00000534062 CDC42BPBQ9Y5S2 1711 aa13.79□□□□□ -0.2
RTL1-201ENST00000534062 SAMD9LQ8IVG5 1584 aa13.79□□□□□ -0.2
RTL1-201ENST00000534062 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
RTL1-201ENST00000534062 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
RTL1-201ENST00000534062 PLEKHH2Q8IVE3 1493 aa13.77□□□□□ -0.2
RTL1-201ENST00000534062 ANKRD50Q9ULJ7 1429 aa13.77□□□□□ -0.2
RTL1-201ENST00000534062 ROCK1Q13464 1354 aa13.77□□□□□ -0.2
RTL1-201ENST00000534062 ADGRL1O94910 1474 aa13.77□□□□□ -0.21
RTL1-201ENST00000534062 RAPGEF3O95398 923 aa13.76□□□□□ -0.21
RTL1-201ENST00000534062 TRAPPC8Q9Y2L5 1435 aa13.76□□□□□ -0.21
RTL1-201ENST00000534062 NUP155O75694 1391 aa13.76□□□□□ -0.21
RTL1-201ENST00000534062 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
RTL1-201ENST00000534062 MBD5Q9P267 1494 aa13.74□□□□□ -0.21
RTL1-201ENST00000534062 PKD2Q13563 968 aa13.73□□□□□ -0.21
RTL1-201ENST00000534062 TONSLQ96HA7 1378 aa13.73□□□□□ -0.21
RTL1-201ENST00000534062 KDM6BO15054 1643 aa13.72□□□□□ -0.21
RTL1-201ENST00000534062 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
RTL1-201ENST00000534062 KIAA1107Q9UPP5 1409 aa13.72□□□□□ -0.21
RTL1-201ENST00000534062 KIF3BO15066 747 aa13.71□□□□□ -0.21
RTL1-201ENST00000534062 ABCA9Q8IUA7 1624 aa13.69□□□□□ -0.22
RTL1-201ENST00000534062 ZNF326Q5BKZ1 582 aaKnown RBP13.69□□□□□ -0.22
RTL1-201ENST00000534062 GGT6Q6P531 493 aa13.68□□□□□ -0.22
RTL1-201ENST00000534062 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
RTL1-201ENST00000534062 ABCC1P33527 1531 aa13.68□□□□□ -0.22
RTL1-201ENST00000534062 ARHGEF5Q12774 1597 aa13.68□□□□□ -0.22
RTL1-201ENST00000534062 GCC2Q8IWJ2 1684 aa13.67□□□□□ -0.22
RTL1-201ENST00000534062 TSPOAP1O95153 1857 aa13.67□□□□□ -0.22
RTL1-201ENST00000534062 MAPKBP1O60336 1514 aa13.67□□□□□ -0.22
RTL1-201ENST00000534062 ADGRL2O95490 1459 aa13.66□□□□□ -0.22
RTL1-201ENST00000534062 ADGBQ8N7X0 1667 aa13.66□□□□□ -0.22
RTL1-201ENST00000534062 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
RTL1-201ENST00000534062 ANP32EQ9BTT0 268 aa13.65□□□□□ -0.22
RTL1-201ENST00000534062 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
RTL1-201ENST00000534062 DENND4BO75064 1496 aaPredicted RBP13.63□□□□□ -0.23
RTL1-201ENST00000534062 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
RTL1-201ENST00000534062 MLECQ14165 292 aa13.62□□□□□ -0.23
RTL1-201ENST00000534062 ARAP3Q8WWN8 1544 aa13.62□□□□□ -0.23
RTL1-201ENST00000534062 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
RTL1-201ENST00000534062 KDM2AQ9Y2K7 1162 aa13.61□□□□□ -0.23
RTL1-201ENST00000534062 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
RTL1-201ENST00000534062 KANK1Q14678 1352 aa13.6□□□□□ -0.23
RTL1-201ENST00000534062 HIRIP3Q9BW71 556 aaPredicted RBP13.6□□□□□ -0.23
RTL1-201ENST00000534062 ATP7AQ04656 1500 aa13.59□□□□□ -0.23
RTL1-201ENST00000534062 DNAJC5Q9H3Z4 198 aa13.58□□□□□ -0.23
RTL1-201ENST00000534062 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.24
RTL1-201ENST00000534062 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.24
RTL1-201ENST00000534062 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.24
RTL1-201ENST00000534062 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
RTL1-201ENST00000534062 NEO1Q92859 1461 aa13.57□□□□□ -0.24
RTL1-201ENST00000534062 CHGAP10645 457 aaKnown RBP13.57□□□□□ -0.24
RTL1-201ENST00000534062 DIP2BQ9P265 1576 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms