RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 PPARGC1BQ86YN6 1023 aaKnown RBP14.7□□□□□ -0.06
CHKA-207ENST00000533728 KCNH8Q96L42 1107 aa14.7□□□□□ -0.06
CHKA-207ENST00000533728 RGS17Q9UGC6 210 aaPredicted RBP14.7□□□□□ -0.06
CHKA-207ENST00000533728 PIP4K2BP78356 416 aa14.69□□□□□ -0.06
CHKA-207ENST00000533728 UGGT2Q9NYU1 1516 aa14.69□□□□□ -0.06
CHKA-207ENST00000533728 FANCAO15360 1455 aa14.68□□□□□ -0.06
CHKA-207ENST00000533728 SETD1AO15047 1707 aaKnown RBP14.67□□□□□ -0.06
CHKA-207ENST00000533728 FRMPD1Q5SYB0 1578 aa14.67□□□□□ -0.06
CHKA-207ENST00000533728 PHLDB1Q86UU1 1377 aa14.66□□□□□ -0.06
CHKA-207ENST00000533728 ZNF335Q9H4Z2 1342 aaPredicted RBP14.64□□□□□ -0.07
CHKA-207ENST00000533728 TIAM1Q13009 1591 aa14.62□□□□□ -0.07
CHKA-207ENST00000533728 MLECQ14165 292 aa14.62□□□□□ -0.07
CHKA-207ENST00000533728 SIGLEC1Q9BZZ2 1709 aa14.62□□□□□ -0.07
CHKA-207ENST00000533728 DISP1Q96F81 1524 aa14.61□□□□□ -0.07
CHKA-207ENST00000533728 KIAA0556O60303 1618 aa14.6□□□□□ -0.07
CHKA-207ENST00000533728 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
CHKA-207ENST00000533728 RRBP1Q9P2E9 1410 aaKnown RBP14.59□□□□□ -0.07
CHKA-207ENST00000533728 CEBPAP49715 358 aaPredicted RBP14.59□□□□□ -0.07
CHKA-207ENST00000533728 NCOA1Q15788 1441 aa14.58□□□□□ -0.07
CHKA-207ENST00000533728 TOM1O60784 492 aa14.58□□□□□ -0.08
CHKA-207ENST00000533728 POTEAQ6S8J7 498 aa14.56□□□□□ -0.08
CHKA-207ENST00000533728 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
CHKA-207ENST00000533728 AKNAQ7Z591 1439 aa14.56□□□□□ -0.08
CHKA-207ENST00000533728 FYCO1Q9BQS8 1478 aa14.56□□□□□ -0.08
CHKA-207ENST00000533728 NEO1Q92859 1461 aa14.54□□□□□ -0.08
CHKA-207ENST00000533728 ARHGEF12Q9NZN5 1544 aa14.52□□□□□ -0.08
CHKA-207ENST00000533728 IFFO2Q5TF58 517 aa14.52□□□□□ -0.09
CHKA-207ENST00000533728 UPF1Q92900 1129 aaKnown RBP eCLIP14.52□□□□□ -0.095e-7■□□□□ 9.8
CHKA-207ENST00000533728 CASKIN1Q8WXD9 1431 aa14.51□□□□□ -0.09
CHKA-207ENST00000533728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
CHKA-207ENST00000533728 RICTORQ6R327 1708 aa14.51□□□□□ -0.09
CHKA-207ENST00000533728 FMN1Q68DA7 1419 aa14.5□□□□□ -0.09
CHKA-207ENST00000533728 LRRC9Q6ZRR7 1453 aa14.5□□□□□ -0.09
CHKA-207ENST00000533728 RANGAP1P46060 587 aaPredicted RBP14.49□□□□□ -0.09
CHKA-207ENST00000533728 SENP3Q9H4L4 574 aaPredicted RBP14.48□□□□□ -0.09
CHKA-207ENST00000533728 CLSPNQ9HAW4 1339 aa14.47□□□□□ -0.09
CHKA-207ENST00000533728 ABCA9Q8IUA7 1624 aa14.47□□□□□ -0.09
CHKA-207ENST00000533728 ZFYVE16Q7Z3T8 1539 aa14.46□□□□□ -0.09
CHKA-207ENST00000533728 CAMSAP1Q5T5Y3 1602 aa14.46□□□□□ -0.09
CHKA-207ENST00000533728 KANK4Q5T7N3 995 aaPredicted RBP14.46□□□□□ -0.09
CHKA-207ENST00000533728 ABCA8O94911 1581 aa14.46□□□□□ -0.09
CHKA-207ENST00000533728 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
CHKA-207ENST00000533728 DENND4BO75064 1496 aaPredicted RBP14.44□□□□□ -0.1
CHKA-207ENST00000533728 LRRIQ1Q96JM4 1722 aa14.43□□□□□ -0.1
CHKA-207ENST00000533728 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.42□□□□□ -0.1
CHKA-207ENST00000533728 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
CHKA-207ENST00000533728 FHOD3Q2V2M9 1422 aa14.41□□□□□ -0.1
CHKA-207ENST00000533728 ZMYM4Q5VZL5 1548 aa14.41□□□□□ -0.1
CHKA-207ENST00000533728 C3P01024 1663 aa14.41□□□□□ -0.1
CHKA-207ENST00000533728 PTPRKQ15262 1439 aa14.4□□□□□ -0.1
CHKA-207ENST00000533728 ALKQ9UM73 1620 aa14.39□□□□□ -0.11
CHKA-207ENST00000533728 RAPGEF6Q8TEU7 1601 aa14.38□□□□□ -0.11
CHKA-207ENST00000533728 HNRNPUL2Q1KMD3 747 aaKnown RBP14.38□□□□□ -0.11
CHKA-207ENST00000533728 CCDC18Q5T9S5 1454 aa14.37□□□□□ -0.11
CHKA-207ENST00000533728 HECW1Q76N89 1606 aa14.37□□□□□ -0.11
CHKA-207ENST00000533728 CPS1P31327 1500 aa14.36□□□□□ -0.11
CHKA-207ENST00000533728 SUPT6HQ7KZ85 1726 aaKnown RBP14.36□□□□□ -0.11
CHKA-207ENST00000533728 MAGI2Q86UL8 1455 aa14.36□□□□□ -0.11
CHKA-207ENST00000533728 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
CHKA-207ENST00000533728 TRAPPC8Q9Y2L5 1435 aa14.35□□□□□ -0.11
CHKA-207ENST00000533728 PKD2Q13563 968 aa14.32□□□□□ -0.12
CHKA-207ENST00000533728 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
CHKA-207ENST00000533728 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
CHKA-207ENST00000533728 C9orf84Q5VXU9 1444 aa14.29□□□□□ -0.12
CHKA-207ENST00000533728 NUP153P49790 1475 aaKnown RBP14.29□□□□□ -0.12
CHKA-207ENST00000533728 ATP10AO60312 1499 aa14.28□□□□□ -0.12
CHKA-207ENST00000533728 PLA2R1Q13018 1463 aa14.28□□□□□ -0.12
CHKA-207ENST00000533728 ATP10BO94823 1461 aa14.27□□□□□ -0.12
CHKA-207ENST00000533728 TCOF1Q13428 1488 aaKnown RBP14.27□□□□□ -0.12
CHKA-207ENST00000533728 P3H3Q8IVL6 736 aa14.27□□□□□ -0.13
CHKA-207ENST00000533728 CFAP74Q9C0B2 1584 aa14.26□□□□□ -0.13
CHKA-207ENST00000533728 SHANK2Q9UPX8 1470 aa14.25□□□□□ -0.13
CHKA-207ENST00000533728 FGD6Q6ZV73 1430 aa14.25□□□□□ -0.13
CHKA-207ENST00000533728 SETD5Q9C0A6 1442 aa14.24□□□□□ -0.13
CHKA-207ENST00000533728 MTUS2Q5JR59 1369 aa14.23□□□□□ -0.13
CHKA-207ENST00000533728 ARID3CA6NKF2 412 aa14.23□□□□□ -0.13
CHKA-207ENST00000533728 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
CHKA-207ENST00000533728 RBM33Q96EV2 1170 aaKnown RBP14.22□□□□□ -0.13
CHKA-207ENST00000533728 NCOA2Q15596 1464 aa14.22□□□□□ -0.13
CHKA-207ENST00000533728 MYOM3Q5VTT5 1437 aa14.22□□□□□ -0.13
CHKA-207ENST00000533728 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.13
CHKA-207ENST00000533728 ZNF142P52746 1687 aaPredicted RBP14.2□□□□□ -0.14
CHKA-207ENST00000533728 PTPN23Q9H3S7 1636 aa14.2□□□□□ -0.14
CHKA-207ENST00000533728 SETBP1Q9Y6X0 1596 aa14.2□□□□□ -0.14
CHKA-207ENST00000533728 RAB3GAP2Q9H2M9 1393 aa14.2□□□□□ -0.14
CHKA-207ENST00000533728 ZNF316A6NFI3 1004 aaPredicted RBP14.19□□□□□ -0.14
CHKA-207ENST00000533728 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
CHKA-207ENST00000533728 LRRC7Q96NW7 1537 aa14.18□□□□□ -0.14
CHKA-207ENST00000533728 RNF17Q9BXT8 1623 aaKnown RBP14.18□□□□□ -0.14
CHKA-207ENST00000533728 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
CHKA-207ENST00000533728 NPATQ14207 1427 aa14.16□□□□□ -0.14
CHKA-207ENST00000533728 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
CHKA-207ENST00000533728 FOXD1Q16676 465 aa14.16□□□□□ -0.14
CHKA-207ENST00000533728 ATP1B4Q9UN42 357 aaPredicted RBP14.15□□□□□ -0.14
CHKA-207ENST00000533728 CDK13Q14004 1512 aaKnown RBP14.15□□□□□ -0.14
CHKA-207ENST00000533728 MYO3AQ8NEV4 1616 aa14.14□□□□□ -0.15
CHKA-207ENST00000533728 POLR1AO95602 1720 aaPredicted RBP14.13□□□□□ -0.15
CHKA-207ENST00000533728 HFM1A2PYH4 1435 aa14.13□□□□□ -0.15
CHKA-207ENST00000533728 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
CHKA-207ENST00000533728 CEP170BQ9Y4F5 1589 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms