RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 MYO5CQ9NQX4 1742 aa33.87■■■■□ 3.01
VPS51-212ENST00000533656 PHLDB1Q86UU1 1377 aa33.85■■■■□ 3.01
VPS51-212ENST00000533656 GPATCH8Q9UKJ3 1502 aaKnown RBP33.84■■■■□ 3.01
VPS51-212ENST00000533656 PREX2Q70Z35 1606 aa33.83■■■■□ 3.01
VPS51-212ENST00000533656 CFAP74Q9C0B2 1584 aa33.82■■■■□ 3
VPS51-212ENST00000533656 RAPGEF3O95398 923 aa33.82■■■■□ 3
VPS51-212ENST00000533656 FANCAO15360 1455 aa33.8■■■■□ 3
VPS51-212ENST00000533656 RICTORQ6R327 1708 aa33.79■■■■□ 3
VPS51-212ENST00000533656 EFCAB2Q5VUJ9 269 aa33.79■■■■□ 3
VPS51-212ENST00000533656 ITSN2Q9NZM3 1697 aa33.79■■■■□ 3
VPS51-212ENST00000533656 ARHGAP5Q13017 1502 aa33.79■■■■□ 3
VPS51-212ENST00000533656 CDC42BPAQ5VT25 1732 aa33.78■■■■□ 3
VPS51-212ENST00000533656 CDC42BPBQ9Y5S2 1711 aa33.73■■■□□ 2.99
VPS51-212ENST00000533656 MYOM3Q5VTT5 1437 aa33.73■■■□□ 2.99
VPS51-212ENST00000533656 CFDP1Q9UEE9 299 aaPredicted RBP33.73■■■□□ 2.99
VPS51-212ENST00000533656 AKNAQ7Z591 1439 aa33.7■■■□□ 2.99
VPS51-212ENST00000533656 HECW2Q9P2P5 1572 aa33.7■■■□□ 2.99
VPS51-212ENST00000533656 MIA2Q96PC5 1412 aa33.7■■■□□ 2.98
VPS51-212ENST00000533656 ADAMTSL3P82987 1691 aa33.68■■■□□ 2.98
VPS51-212ENST00000533656 ARHGEF40Q8TER5 1519 aa33.68■■■□□ 2.98
VPS51-212ENST00000533656 DENND4BO75064 1496 aaPredicted RBP33.67■■■□□ 2.98
VPS51-212ENST00000533656 PLEKHH2Q8IVE3 1493 aa33.65■■■□□ 2.98
VPS51-212ENST00000533656 BCORL1Q5H9F3 1711 aa33.64■■■□□ 2.98
VPS51-212ENST00000533656 PPARGC1BQ86YN6 1023 aaKnown RBP33.6■■■□□ 2.97
VPS51-212ENST00000533656 KIAA1107Q9UPP5 1409 aa33.6■■■□□ 2.97
VPS51-212ENST00000533656 SIGLEC1Q9BZZ2 1709 aa33.59■■■□□ 2.97
VPS51-212ENST00000533656 ABCC1P33527 1531 aa33.59■■■□□ 2.97
VPS51-212ENST00000533656 ZMYM4Q5VZL5 1548 aa33.59■■■□□ 2.97
VPS51-212ENST00000533656 SAMD9LQ8IVG5 1584 aa33.59■■■□□ 2.97
VPS51-212ENST00000533656 ZNF777Q9ULD5 760 aaPredicted RBP33.58■■■□□ 2.97
VPS51-212ENST00000533656 FGD6Q6ZV73 1430 aa33.58■■■□□ 2.97
VPS51-212ENST00000533656 SCAPERQ9BY12 1400 aa33.57■■■□□ 2.96
VPS51-212ENST00000533656 MADDQ8WXG6 1647 aa33.57■■■□□ 2.96
VPS51-212ENST00000533656 CAMSAP2Q08AD1 1489 aa33.54■■■□□ 2.96
VPS51-212ENST00000533656 ZFYVE16Q7Z3T8 1539 aa33.51■■■□□ 2.95
VPS51-212ENST00000533656 POGZQ7Z3K3 1410 aa33.51■■■□□ 2.95
VPS51-212ENST00000533656 YEATS2Q9ULM3 1422 aa33.51■■■□□ 2.95
VPS51-212ENST00000533656 PTPRMP28827 1452 aa33.5■■■□□ 2.95
VPS51-212ENST00000533656 TCOF1Q13428 1488 aaKnown RBP33.5■■■□□ 2.95
VPS51-212ENST00000533656 PTPN23Q9H3S7 1636 aa33.49■■■□□ 2.95
VPS51-212ENST00000533656 ZNF518AQ6AHZ1 1483 aa33.49■■■□□ 2.95
VPS51-212ENST00000533656 SYCP2Q9BX26 1530 aa33.48■■■□□ 2.95
VPS51-212ENST00000533656 ZNF644Q9H582 1327 aaPredicted RBP33.48■■■□□ 2.95
VPS51-212ENST00000533656 ARHGEF12Q9NZN5 1544 aa33.47■■■□□ 2.95
VPS51-212ENST00000533656 RSPH4AQ5TD94 716 aa33.46■■■□□ 2.95
VPS51-212ENST00000533656 ARID4BQ4LE39 1312 aaPredicted RBP33.46■■■□□ 2.95
VPS51-212ENST00000533656 RIMS1Q86UR5 1692 aaKnown RBP33.45■■■□□ 2.95
VPS51-212ENST00000533656 MBD5Q9P267 1494 aa33.44■■■□□ 2.94
VPS51-212ENST00000533656 HNRNPMP52272 730 aaKnown RBP eCLIP33.41■■■□□ 2.94
VPS51-212ENST00000533656 TRAPPC8Q9Y2L5 1435 aa33.41■■■□□ 2.94
VPS51-212ENST00000533656 ARHGEF5Q12774 1597 aa33.41■■■□□ 2.94
VPS51-212ENST00000533656 RRBP1Q9P2E9 1410 aaKnown RBP33.4■■■□□ 2.94
VPS51-212ENST00000533656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.4■■■□□ 2.94
VPS51-212ENST00000533656 KDM5CP41229 1560 aa33.39■■■□□ 2.94
VPS51-212ENST00000533656 MAGI2Q86UL8 1455 aa33.39■■■□□ 2.94
VPS51-212ENST00000533656 CCDC141Q6ZP82 1450 aa33.38■■■□□ 2.93
VPS51-212ENST00000533656 AFAP1Q8N556 730 aa33.34■■■□□ 2.93
VPS51-212ENST00000533656 FAM50AQ14320 339 aaKnown RBP33.32■■■□□ 2.92
VPS51-212ENST00000533656 MLH3Q9UHC1 1453 aa33.31■■■□□ 2.92
VPS51-212ENST00000533656 FER1L4A9Z1Z3 1794 aa33.3■■■□□ 2.92
VPS51-212ENST00000533656 SPAG9O60271 1321 aaKnown RBP33.28■■■□□ 2.92
VPS51-212ENST00000533656 DNMT1P26358 1616 aaKnown RBP33.28■■■□□ 2.92
VPS51-212ENST00000533656 TSPY4P0CV99 314 aa33.27■■■□□ 2.92
VPS51-212ENST00000533656 TSPY10P0CW01 314 aa33.27■■■□□ 2.92
VPS51-212ENST00000533656 RTEL1-TNFRSF6BF6WH68 1400 aa33.27■■■□□ 2.92
VPS51-212ENST00000533656 SHANK2Q9UPX8 1470 aa33.26■■■□□ 2.92
VPS51-212ENST00000533656 DAPK1P53355 1430 aa33.26■■■□□ 2.91
VPS51-212ENST00000533656 ATP10AO60312 1499 aa33.25■■■□□ 2.91
VPS51-212ENST00000533656 ABCC5O15440 1437 aa33.24■■■□□ 2.91
VPS51-212ENST00000533656 C9orf84Q5VXU9 1444 aa33.23■■■□□ 2.91
VPS51-212ENST00000533656 DIP2CQ9Y2E4 1556 aa33.22■■■□□ 2.91
VPS51-212ENST00000533656 MAST1Q9Y2H9 1570 aa33.22■■■□□ 2.91
VPS51-212ENST00000533656 INO80Q9ULG1 1556 aaPredicted RBP33.21■■■□□ 2.91
VPS51-212ENST00000533656 ABCA6Q8N139 1617 aa33.21■■■□□ 2.91
VPS51-212ENST00000533656 ATP7AQ04656 1500 aa33.21■■■□□ 2.91
VPS51-212ENST00000533656 LMTK3Q96Q04 1460 aa33.2■■■□□ 2.91
VPS51-212ENST00000533656 MLECQ14165 292 aa33.2■■■□□ 2.91
VPS51-212ENST00000533656 MYT1LQ9UL68 1186 aa33.19■■■□□ 2.9
VPS51-212ENST00000533656 CROCC2H7BZ55 1655 aa33.19■■■□□ 2.9
VPS51-212ENST00000533656 KIDINS220Q9ULH0 1771 aa33.16■■■□□ 2.9
VPS51-212ENST00000533656 PLPPR3Q6T4P5 718 aa33.14■■■□□ 2.9
VPS51-212ENST00000533656 ILDR1Q86SU0 546 aaPredicted RBP33.13■■■□□ 2.89
VPS51-212ENST00000533656 REREQ9P2R6 1566 aa33.09■■■□□ 2.89
VPS51-212ENST00000533656 ADGRL2O95490 1459 aa33.09■■■□□ 2.89
VPS51-212ENST00000533656 PLXNC1O60486 1568 aa33.09■■■□□ 2.89
VPS51-212ENST00000533656 ANKRD30AQ9BXX3 1397 aa33.07■■■□□ 2.88
VPS51-212ENST00000533656 PTPRKQ15262 1439 aa33.04■■■□□ 2.88
VPS51-212ENST00000533656 ROCK1Q13464 1354 aa33.04■■■□□ 2.88
VPS51-212ENST00000533656 ADGBQ8N7X0 1667 aa33.03■■■□□ 2.88
VPS51-212ENST00000533656 A2MP01023 1474 aa33.01■■■□□ 2.88
VPS51-212ENST00000533656 NCOA1Q15788 1441 aa33.01■■■□□ 2.87
VPS51-212ENST00000533656 ITGAEP38570 1179 aa33■■■□□ 2.87
VPS51-212ENST00000533656 CHIC2Q9UKJ5 165 aa33■■■□□ 2.87
VPS51-212ENST00000533656 DHX29Q7Z478 1369 aaKnown RBP32.98■■■□□ 2.87
VPS51-212ENST00000533656 KIF15Q9NS87 1388 aa32.98■■■□□ 2.87
VPS51-212ENST00000533656 HSPA2P54652 639 aa32.97■■■□□ 2.87
VPS51-212ENST00000533656 PREX1Q8TCU6 1659 aa32.97■■■□□ 2.87
VPS51-212ENST00000533656 AGLP35573 1532 aa32.97■■■□□ 2.87
VPS51-212ENST00000533656 DUOX2Q9NRD8 1548 aa32.97■■■□□ 2.87
VPS51-212ENST00000533656 CEBPAP49715 358 aaPredicted RBP32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms