RNA–Protein interactions for RNA: ENST00000533511.6

NUCB2-215, Transcript of nucleobindin 2, humanhuman

TSL 3

Gene NUCB2, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-215ENST00000533511 MAGI2Q86UL8 1455 aa25.77■■□□□ 1.72
NUCB2-215ENST00000533511 ZMYM4Q5VZL5 1548 aa25.77■■□□□ 1.72
NUCB2-215ENST00000533511 MLECQ14165 292 aa25.76■■□□□ 1.71
NUCB2-215ENST00000533511 CLIP1P30622 1438 aa25.74■■□□□ 1.71
NUCB2-215ENST00000533511 TROQ12816 1431 aaPredicted RBP25.73■■□□□ 1.71
NUCB2-215ENST00000533511 MYT1LQ9UL68 1186 aa25.7■■□□□ 1.7
NUCB2-215ENST00000533511 KIF14Q15058 1648 aa25.7■■□□□ 1.7
NUCB2-215ENST00000533511 RIMS1Q86UR5 1692 aaKnown RBP25.69■■□□□ 1.7
NUCB2-215ENST00000533511 MYO5CQ9NQX4 1742 aa25.68■■□□□ 1.7
NUCB2-215ENST00000533511 ARHGAP5Q13017 1502 aa25.68■■□□□ 1.7
NUCB2-215ENST00000533511 PCF11O94913 1555 aaKnown RBP25.66■■□□□ 1.7
NUCB2-215ENST00000533511 ATP10AO60312 1499 aa25.66■■□□□ 1.7
NUCB2-215ENST00000533511 AFAP1Q8N556 730 aa25.65■■□□□ 1.7
NUCB2-215ENST00000533511 LMTK3Q96Q04 1460 aa25.65■■□□□ 1.7
NUCB2-215ENST00000533511 CASKIN1Q8WXD9 1431 aa25.63■■□□□ 1.69
NUCB2-215ENST00000533511 ZNF518AQ6AHZ1 1483 aa25.62■■□□□ 1.69
NUCB2-215ENST00000533511 C9orf84Q5VXU9 1444 aa25.62■■□□□ 1.69
NUCB2-215ENST00000533511 SIGLEC1Q9BZZ2 1709 aa25.61■■□□□ 1.69
NUCB2-215ENST00000533511 HSPA2P54652 639 aa25.6■■□□□ 1.69
NUCB2-215ENST00000533511 CCDC18Q5T9S5 1454 aa25.6■■□□□ 1.69
NUCB2-215ENST00000533511 LRRIQ1Q96JM4 1722 aa25.57■■□□□ 1.68
NUCB2-215ENST00000533511 FBXO41Q8TF61 875 aa25.56■■□□□ 1.68
NUCB2-215ENST00000533511 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
NUCB2-215ENST00000533511 FER1L4A9Z1Z3 1794 aa25.51■■□□□ 1.67
NUCB2-215ENST00000533511 CEBPAP49715 358 aaPredicted RBP25.51■■□□□ 1.67
NUCB2-215ENST00000533511 ARHGEF12Q9NZN5 1544 aa25.51■■□□□ 1.67
NUCB2-215ENST00000533511 KDM5CP41229 1560 aa25.5■■□□□ 1.67
NUCB2-215ENST00000533511 FYCO1Q9BQS8 1478 aa25.5■■□□□ 1.67
NUCB2-215ENST00000533511 ZNF777Q9ULD5 760 aaPredicted RBP25.49■■□□□ 1.67
NUCB2-215ENST00000533511 CDC42BPBQ9Y5S2 1711 aa25.48■■□□□ 1.67
NUCB2-215ENST00000533511 TRAPPC8Q9Y2L5 1435 aa25.47■■□□□ 1.67
NUCB2-215ENST00000533511 MLH3Q9UHC1 1453 aa25.47■■□□□ 1.67
NUCB2-215ENST00000533511 PREX2Q70Z35 1606 aa25.46■■□□□ 1.67
NUCB2-215ENST00000533511 ESF1Q9H501 851 aaKnown RBP25.46■■□□□ 1.67
NUCB2-215ENST00000533511 DIP2CQ9Y2E4 1556 aa25.44■■□□□ 1.66
NUCB2-215ENST00000533511 ABCC1P33527 1531 aa25.43■■□□□ 1.66
NUCB2-215ENST00000533511 ABCA6Q8N139 1617 aa25.38■■□□□ 1.65
NUCB2-215ENST00000533511 REREQ9P2R6 1566 aa25.38■■□□□ 1.65
NUCB2-215ENST00000533511 HNRNPMP52272 730 aaKnown RBP eCLIP25.37■■□□□ 1.65
NUCB2-215ENST00000533511 CFDP1Q9UEE9 299 aaPredicted RBP25.37■■□□□ 1.65
NUCB2-215ENST00000533511 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
NUCB2-215ENST00000533511 CDC42BPAQ5VT25 1732 aa25.36■■□□□ 1.65
NUCB2-215ENST00000533511 GPATCH8Q9UKJ3 1502 aaKnown RBP25.36■■□□□ 1.65
NUCB2-215ENST00000533511 SPAG9O60271 1321 aaKnown RBP25.35■■□□□ 1.65
NUCB2-215ENST00000533511 MTUS2Q5JR59 1369 aa25.34■■□□□ 1.65
NUCB2-215ENST00000533511 CCNB3Q8WWL7 1395 aa25.34■■□□□ 1.65
NUCB2-215ENST00000533511 UHRF1BP1Q6BDS2 1440 aa25.34■■□□□ 1.65
NUCB2-215ENST00000533511 AGLP35573 1532 aa25.33■■□□□ 1.65
NUCB2-215ENST00000533511 PREX1Q8TCU6 1659 aa25.32■■□□□ 1.64
NUCB2-215ENST00000533511 CERKQ8TCT0 537 aa25.31■■□□□ 1.64
NUCB2-215ENST00000533511 DMRT2Q9Y5R5 561 aa25.31■■□□□ 1.64
NUCB2-215ENST00000533511 SYCP2Q9BX26 1530 aa25.3■■□□□ 1.64
NUCB2-215ENST00000533511 SAMD9LQ8IVG5 1584 aa25.3■■□□□ 1.64
NUCB2-215ENST00000533511 KIDINS220Q9ULH0 1771 aa25.29■■□□□ 1.64
NUCB2-215ENST00000533511 PLEKHH2Q8IVE3 1493 aa25.27■■□□□ 1.64
NUCB2-215ENST00000533511 KIAA1107Q9UPP5 1409 aa25.26■■□□□ 1.63
NUCB2-215ENST00000533511 CNTLNQ9NXG0 1405 aa25.25■■□□□ 1.63
NUCB2-215ENST00000533511 C3P01024 1663 aa25.22■■□□□ 1.63
NUCB2-215ENST00000533511 ZNF644Q9H582 1327 aaPredicted RBP25.2■■□□□ 1.62
NUCB2-215ENST00000533511 CEP162Q5TB80 1403 aa25.2■■□□□ 1.62
NUCB2-215ENST00000533511 ATP7AQ04656 1500 aa25.19■■□□□ 1.62
NUCB2-215ENST00000533511 SETD1BQ9UPS6 1966 aaKnown RBP25.19■■□□□ 1.62
NUCB2-215ENST00000533511 GGT6Q6P531 493 aa25.18■■□□□ 1.62
NUCB2-215ENST00000533511 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
NUCB2-215ENST00000533511 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
NUCB2-215ENST00000533511 A2MP01023 1474 aa25.17■■□□□ 1.62
NUCB2-215ENST00000533511 EHBP1L1Q8N3D4 1523 aa25.15■■□□□ 1.62
NUCB2-215ENST00000533511 SUPT6HQ7KZ85 1726 aaKnown RBP25.15■■□□□ 1.62
NUCB2-215ENST00000533511 STRCQ7RTU9 1775 aa25.13■■□□□ 1.61
NUCB2-215ENST00000533511 INO80Q9ULG1 1556 aaPredicted RBP25.13■■□□□ 1.61
NUCB2-215ENST00000533511 TIAM1Q13009 1591 aa25.12■■□□□ 1.61
NUCB2-215ENST00000533511 NPATQ14207 1427 aa25.12■■□□□ 1.61
NUCB2-215ENST00000533511 PTPRTO14522 1441 aa25.1■■□□□ 1.61
NUCB2-215ENST00000533511 PLXNC1O60486 1568 aa25.08■■□□□ 1.61
NUCB2-215ENST00000533511 MBD5Q9P267 1494 aa25.08■■□□□ 1.6
NUCB2-215ENST00000533511 PPP6R1Q9UPN7 881 aa25.07■■□□□ 1.6
NUCB2-215ENST00000533511 MROH2AA6NES4 1674 aa25.07■■□□□ 1.6
NUCB2-215ENST00000533511 RTEL1-TNFRSF6BF6WH68 1400 aa25.04■■□□□ 1.6
NUCB2-215ENST00000533511 NCOA1Q15788 1441 aa25.04■■□□□ 1.6
NUCB2-215ENST00000533511 CLTCQ00610 1675 aaKnown RBP25.04■■□□□ 1.6
NUCB2-215ENST00000533511 NCOA2Q15596 1464 aa25.03■■□□□ 1.6
NUCB2-215ENST00000533511 RSPH4AQ5TD94 716 aa25.03■■□□□ 1.6
NUCB2-215ENST00000533511 LOC105371045A0A1W2PR82 267 aa25.02■■□□□ 1.6
NUCB2-215ENST00000533511 DHX29Q7Z478 1369 aaKnown RBP25.02■■□□□ 1.6
NUCB2-215ENST00000533511 CAMSAP1Q5T5Y3 1602 aa25.01■■□□□ 1.59
NUCB2-215ENST00000533511 ADGBQ8N7X0 1667 aa25.01■■□□□ 1.59
NUCB2-215ENST00000533511 NCKAP5LQ9HCH0 1330 aa25.01■■□□□ 1.59
NUCB2-215ENST00000533511 KIF3BO15066 747 aa25■■□□□ 1.59
NUCB2-215ENST00000533511 PTPRKQ15262 1439 aa25■■□□□ 1.59
NUCB2-215ENST00000533511 CCDC141Q6ZP82 1450 aa24.98■■□□□ 1.59
NUCB2-215ENST00000533511 CAMSAP2Q08AD1 1489 aa24.97■■□□□ 1.59
NUCB2-215ENST00000533511 TSPY4P0CV99 314 aa24.97■■□□□ 1.59
NUCB2-215ENST00000533511 TSPY10P0CW01 314 aa24.97■■□□□ 1.59
NUCB2-215ENST00000533511 PKD2Q13563 968 aa24.94■■□□□ 1.58
NUCB2-215ENST00000533511 VPS8Q8N3P4 1428 aa24.93■■□□□ 1.58
NUCB2-215ENST00000533511 WASHC2CQ9Y4E1 1318 aa24.92■■□□□ 1.58
NUCB2-215ENST00000533511 MYO3AQ8NEV4 1616 aa24.91■■□□□ 1.58
NUCB2-215ENST00000533511 LTBP4Q8N2S1 1624 aa24.9■■□□□ 1.58
NUCB2-215ENST00000533511 CEP170BQ9Y4F5 1589 aaPredicted RBP24.9■■□□□ 1.58
NUCB2-215ENST00000533511 LRRC9Q6ZRR7 1453 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms