RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
TRAPPC4-211ENST00000533012 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
TRAPPC4-211ENST00000533012 PPRC1Q5VV67 1664 aaKnown RBP17.36■□□□□ 0.37
TRAPPC4-211ENST00000533012 MYO5CQ9NQX4 1742 aa17.33■□□□□ 0.37
TRAPPC4-211ENST00000533012 RAPGEF3O95398 923 aa17.31■□□□□ 0.36
TRAPPC4-211ENST00000533012 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
TRAPPC4-211ENST00000533012 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
TRAPPC4-211ENST00000533012 PREX2Q70Z35 1606 aa17.3■□□□□ 0.36
TRAPPC4-211ENST00000533012 CFAP74Q9C0B2 1584 aa17.3■□□□□ 0.36
TRAPPC4-211ENST00000533012 ADGRL1O94910 1474 aa17.3■□□□□ 0.36
TRAPPC4-211ENST00000533012 COL17A1Q9UMD9 1497 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC4-211ENST00000533012 ZNF644Q9H582 1327 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC4-211ENST00000533012 HNRNPMP52272 730 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRAPPC4-211ENST00000533012 CDC42BPAQ5VT25 1732 aa17.29■□□□□ 0.36
TRAPPC4-211ENST00000533012 CDC42BPBQ9Y5S2 1711 aa17.29■□□□□ 0.36
TRAPPC4-211ENST00000533012 MIA2Q96PC5 1412 aa17.29■□□□□ 0.36
TRAPPC4-211ENST00000533012 DENND4BO75064 1496 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC4-211ENST00000533012 KDM6BO15054 1643 aa17.28■□□□□ 0.36
TRAPPC4-211ENST00000533012 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.36
TRAPPC4-211ENST00000533012 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
TRAPPC4-211ENST00000533012 KIAA1107Q9UPP5 1409 aa17.26■□□□□ 0.35
TRAPPC4-211ENST00000533012 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
TRAPPC4-211ENST00000533012 RSPH4AQ5TD94 716 aa17.25■□□□□ 0.35
TRAPPC4-211ENST00000533012 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
TRAPPC4-211ENST00000533012 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
TRAPPC4-211ENST00000533012 SAMD9LQ8IVG5 1584 aa17.22■□□□□ 0.35
TRAPPC4-211ENST00000533012 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
TRAPPC4-211ENST00000533012 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-211ENST00000533012 ABCC1P33527 1531 aa17.21■□□□□ 0.34
TRAPPC4-211ENST00000533012 POGZQ7Z3K3 1410 aa17.21■□□□□ 0.34
TRAPPC4-211ENST00000533012 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.34
TRAPPC4-211ENST00000533012 CAMSAP2Q08AD1 1489 aa17.19■□□□□ 0.34
TRAPPC4-211ENST00000533012 ZNF518AQ6AHZ1 1483 aa17.19■□□□□ 0.34
TRAPPC4-211ENST00000533012 TSPY4P0CV99 314 aa17.19■□□□□ 0.34
TRAPPC4-211ENST00000533012 TSPY10P0CW01 314 aa17.19■□□□□ 0.34
TRAPPC4-211ENST00000533012 SPAG9O60271 1321 aaKnown RBP17.18■□□□□ 0.34
TRAPPC4-211ENST00000533012 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
TRAPPC4-211ENST00000533012 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
TRAPPC4-211ENST00000533012 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
TRAPPC4-211ENST00000533012 TCOF1Q13428 1488 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-211ENST00000533012 MAGI2Q86UL8 1455 aa17.14■□□□□ 0.33
TRAPPC4-211ENST00000533012 RICTORQ6R327 1708 aa17.13■□□□□ 0.33
TRAPPC4-211ENST00000533012 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
TRAPPC4-211ENST00000533012 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
TRAPPC4-211ENST00000533012 FRMPD1Q5SYB0 1578 aa17.12■□□□□ 0.33
TRAPPC4-211ENST00000533012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■■■□ 26.4
TRAPPC4-211ENST00000533012 ZMYM4Q5VZL5 1548 aa17.11■□□□□ 0.33
TRAPPC4-211ENST00000533012 ABCC5O15440 1437 aa17.1■□□□□ 0.33
TRAPPC4-211ENST00000533012 RRBP1Q9P2E9 1410 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-211ENST00000533012 KDM5CP41229 1560 aa17.1■□□□□ 0.33
TRAPPC4-211ENST00000533012 ARHGEF5Q12774 1597 aa17.1■□□□□ 0.33
TRAPPC4-211ENST00000533012 ITGAEP38570 1179 aa17.09■□□□□ 0.33
TRAPPC4-211ENST00000533012 RTEL1-TNFRSF6BF6WH68 1400 aa17.09■□□□□ 0.33
TRAPPC4-211ENST00000533012 YEATS2Q9ULM3 1422 aa17.09■□□□□ 0.33
TRAPPC4-211ENST00000533012 ZFYVE16Q7Z3T8 1539 aa17.07■□□□□ 0.32
TRAPPC4-211ENST00000533012 DAPK1P53355 1430 aa17.07■□□□□ 0.32
TRAPPC4-211ENST00000533012 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
TRAPPC4-211ENST00000533012 ATP10AO60312 1499 aa17.06■□□□□ 0.32
TRAPPC4-211ENST00000533012 ARID4BQ4LE39 1312 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC4-211ENST00000533012 HECW2Q9P2P5 1572 aa17.05■□□□□ 0.32
TRAPPC4-211ENST00000533012 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
TRAPPC4-211ENST00000533012 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
TRAPPC4-211ENST00000533012 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-211ENST00000533012 RRP7BPQ9NSQ0 103 aa17.03■□□□□ 0.32
TRAPPC4-211ENST00000533012 DNMT1P26358 1616 aaKnown RBP17.02■□□□□ 0.31
TRAPPC4-211ENST00000533012 ANKRD30AQ9BXX3 1397 aa17.02■□□□□ 0.31
TRAPPC4-211ENST00000533012 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
TRAPPC4-211ENST00000533012 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
TRAPPC4-211ENST00000533012 ARHGEF40Q8TER5 1519 aa17■□□□□ 0.31
TRAPPC4-211ENST00000533012 INO80Q9ULG1 1556 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC4-211ENST00000533012 MAST1Q9Y2H9 1570 aa16.99■□□□□ 0.31
TRAPPC4-211ENST00000533012 PTPRKQ15262 1439 aa16.99■□□□□ 0.31
TRAPPC4-211ENST00000533012 DHX29Q7Z478 1369 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-211ENST00000533012 A2MP01023 1474 aa16.98■□□□□ 0.31
TRAPPC4-211ENST00000533012 DIP2CQ9Y2E4 1556 aa16.98■□□□□ 0.31
TRAPPC4-211ENST00000533012 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
TRAPPC4-211ENST00000533012 MLECQ14165 292 aa16.96■□□□□ 0.31
TRAPPC4-211ENST00000533012 KIF15Q9NS87 1388 aa16.96■□□□□ 0.31
TRAPPC4-211ENST00000533012 ABCA6Q8N139 1617 aa16.96■□□□□ 0.3
TRAPPC4-211ENST00000533012 ROCK1Q13464 1354 aa16.95■□□□□ 0.3
TRAPPC4-211ENST00000533012 KIF3BO15066 747 aa16.94■□□□□ 0.3
TRAPPC4-211ENST00000533012 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
TRAPPC4-211ENST00000533012 ADGRL2O95490 1459 aa16.93■□□□□ 0.3
TRAPPC4-211ENST00000533012 CROCC2H7BZ55 1655 aa16.92■□□□□ 0.3
TRAPPC4-211ENST00000533012 GGT6Q6P531 493 aa16.92■□□□□ 0.3
TRAPPC4-211ENST00000533012 AGLP35573 1532 aa16.91■□□□□ 0.3
TRAPPC4-211ENST00000533012 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
TRAPPC4-211ENST00000533012 PLXNC1O60486 1568 aa16.9■□□□□ 0.3
TRAPPC4-211ENST00000533012 ESF1Q9H501 851 aaKnown RBP16.9■□□□□ 0.3
TRAPPC4-211ENST00000533012 ADGBQ8N7X0 1667 aa16.9■□□□□ 0.3
TRAPPC4-211ENST00000533012 PPP6R1Q9UPN7 881 aa16.89■□□□□ 0.29
TRAPPC4-211ENST00000533012 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
TRAPPC4-211ENST00000533012 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
TRAPPC4-211ENST00000533012 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
TRAPPC4-211ENST00000533012 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC4-211ENST00000533012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRAPPC4-211ENST00000533012 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
TRAPPC4-211ENST00000533012 WASHC2CQ9Y4E1 1318 aa16.83■□□□□ 0.28
TRAPPC4-211ENST00000533012 NAIPQ13075 1403 aa16.82■□□□□ 0.28
TRAPPC4-211ENST00000533012 HFM1A2PYH4 1435 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms