RNA–Protein interactions for RNA: ENST00000532931.5

ATM-219, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-219ENST00000532931 CDC42BPBQ9Y5S2 1711 aa19.51■□□□□ 0.71
ATM-219ENST00000532931 ARAP3Q8WWN8 1544 aa19.51■□□□□ 0.71
ATM-219ENST00000532931 PREX2Q70Z35 1606 aa19.48■□□□□ 0.71
ATM-219ENST00000532931 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
ATM-219ENST00000532931 CFAP74Q9C0B2 1584 aa19.46■□□□□ 0.71
ATM-219ENST00000532931 APLP2Q06481 763 aa19.46■□□□□ 0.71
ATM-219ENST00000532931 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
ATM-219ENST00000532931 PLCH2O75038 1416 aa19.45■□□□□ 0.7
ATM-219ENST00000532931 KDM4FA0A1W2PPD8 638 aa19.45■□□□□ 0.7
ATM-219ENST00000532931 ITSN2Q9NZM3 1697 aa19.45■□□□□ 0.7
ATM-219ENST00000532931 DMRT2Q9Y5R5 561 aa19.43■□□□□ 0.7
ATM-219ENST00000532931 NCOA2Q15596 1464 aa19.42■□□□□ 0.7
ATM-219ENST00000532931 NEO1Q92859 1461 aa19.41■□□□□ 0.7
ATM-219ENST00000532931 GPATCH8Q9UKJ3 1502 aaKnown RBP19.41■□□□□ 0.7
ATM-219ENST00000532931 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
ATM-219ENST00000532931 FANCAO15360 1455 aa19.38■□□□□ 0.69
ATM-219ENST00000532931 KDM6BO15054 1643 aa19.37■□□□□ 0.69
ATM-219ENST00000532931 ARHGAP5Q13017 1502 aa19.35■□□□□ 0.69
ATM-219ENST00000532931 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
ATM-219ENST00000532931 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.68
ATM-219ENST00000532931 RICTORQ6R327 1708 aa19.33■□□□□ 0.68
ATM-219ENST00000532931 AKNAQ7Z591 1439 aa19.33■□□□□ 0.68
ATM-219ENST00000532931 SAMD9LQ8IVG5 1584 aa19.32■□□□□ 0.68
ATM-219ENST00000532931 COL17A1Q9UMD9 1497 aaPredicted RBP19.3■□□□□ 0.68
ATM-219ENST00000532931 MYOM3Q5VTT5 1437 aa19.3■□□□□ 0.68
ATM-219ENST00000532931 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
ATM-219ENST00000532931 ABCC1P33527 1531 aa19.29■□□□□ 0.68
ATM-219ENST00000532931 ADGRL1O94910 1474 aa19.27■□□□□ 0.67
ATM-219ENST00000532931 FRMPD1Q5SYB0 1578 aa19.27■□□□□ 0.67
ATM-219ENST00000532931 CFDP1Q9UEE9 299 aaPredicted RBP19.26■□□□□ 0.67
ATM-219ENST00000532931 PLEKHH2Q8IVE3 1493 aa19.26■□□□□ 0.67
ATM-219ENST00000532931 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
ATM-219ENST00000532931 DENND4BO75064 1496 aaPredicted RBP19.23■□□□□ 0.67
ATM-219ENST00000532931 PTPN23Q9H3S7 1636 aa19.23■□□□□ 0.67
ATM-219ENST00000532931 ARHGEF12Q9NZN5 1544 aa19.23■□□□□ 0.67
ATM-219ENST00000532931 SCAPERQ9BY12 1400 aa19.23■□□□□ 0.67
ATM-219ENST00000532931 ZMYM4Q5VZL5 1548 aa19.22■□□□□ 0.67
ATM-219ENST00000532931 FGD6Q6ZV73 1430 aa19.22■□□□□ 0.67
ATM-219ENST00000532931 KDM5CP41229 1560 aa19.22■□□□□ 0.67
ATM-219ENST00000532931 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
ATM-219ENST00000532931 ARHGEF5Q12774 1597 aa19.21■□□□□ 0.67
ATM-219ENST00000532931 POGZQ7Z3K3 1410 aa19.21■□□□□ 0.67
ATM-219ENST00000532931 TCOF1Q13428 1488 aaKnown RBP19.21■□□□□ 0.67
ATM-219ENST00000532931 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
ATM-219ENST00000532931 MBD5Q9P267 1494 aa19.2■□□□□ 0.66
ATM-219ENST00000532931 ILDR1Q86SU0 546 aaPredicted RBP19.19■□□□□ 0.66
ATM-219ENST00000532931 ZNF518AQ6AHZ1 1483 aa19.19■□□□□ 0.66
ATM-219ENST00000532931 ZNF644Q9H582 1327 aaPredicted RBP19.17■□□□□ 0.66
ATM-219ENST00000532931 ZNF777Q9ULD5 760 aaPredicted RBP19.16■□□□□ 0.66
ATM-219ENST00000532931 TRAPPC8Q9Y2L5 1435 aa19.16■□□□□ 0.66
ATM-219ENST00000532931 CROCC2H7BZ55 1655 aa19.15■□□□□ 0.66
ATM-219ENST00000532931 RAPGEF3O95398 923 aa19.15■□□□□ 0.66
ATM-219ENST00000532931 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
ATM-219ENST00000532931 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
ATM-219ENST00000532931 MAGI2Q86UL8 1455 aa19.15■□□□□ 0.66
ATM-219ENST00000532931 KIDINS220Q9ULH0 1771 aa19.14■□□□□ 0.66
ATM-219ENST00000532931 RSPH4AQ5TD94 716 aa19.14■□□□□ 0.65
ATM-219ENST00000532931 HECW2Q9P2P5 1572 aa19.14■□□□□ 0.65
ATM-219ENST00000532931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.13■□□□□ 0.65
ATM-219ENST00000532931 MLH3Q9UHC1 1453 aa19.13■□□□□ 0.65
ATM-219ENST00000532931 DNMT1P26358 1616 aaKnown RBP19.13■□□□□ 0.65
ATM-219ENST00000532931 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
ATM-219ENST00000532931 RRBP1Q9P2E9 1410 aaKnown RBP19.12■□□□□ 0.65
ATM-219ENST00000532931 HNRNPMP52272 730 aaKnown RBP eCLIP19.12■□□□□ 0.656e-7■■■□□ 18.1
ATM-219ENST00000532931 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
ATM-219ENST00000532931 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
ATM-219ENST00000532931 AFAP1Q8N556 730 aa19.1■□□□□ 0.65
ATM-219ENST00000532931 ARHGEF40Q8TER5 1519 aa19.1■□□□□ 0.65
ATM-219ENST00000532931 RTEL1-TNFRSF6BF6WH68 1400 aa19.08■□□□□ 0.64
ATM-219ENST00000532931 ZFYVE16Q7Z3T8 1539 aa19.07■□□□□ 0.64
ATM-219ENST00000532931 ATP7AQ04656 1500 aa19.06■□□□□ 0.64
ATM-219ENST00000532931 SHANK2Q9UPX8 1470 aa19.06■□□□□ 0.64
ATM-219ENST00000532931 ABCA6Q8N139 1617 aa19.06■□□□□ 0.64
ATM-219ENST00000532931 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
ATM-219ENST00000532931 ABCC5O15440 1437 aa19.05■□□□□ 0.64
ATM-219ENST00000532931 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
ATM-219ENST00000532931 DIP2CQ9Y2E4 1556 aa19.05■□□□□ 0.64
ATM-219ENST00000532931 DAPK1P53355 1430 aa19.04■□□□□ 0.64
ATM-219ENST00000532931 SPAG9O60271 1321 aaKnown RBP19.02■□□□□ 0.64
ATM-219ENST00000532931 PLXNC1O60486 1568 aa19.02■□□□□ 0.64
ATM-219ENST00000532931 YEATS2Q9ULM3 1422 aa19.02■□□□□ 0.64
ATM-219ENST00000532931 SIGLEC1Q9BZZ2 1709 aa19.01■□□□□ 0.63
ATM-219ENST00000532931 ATP10AO60312 1499 aa19■□□□□ 0.63
ATM-219ENST00000532931 C9orf84Q5VXU9 1444 aa18.99■□□□□ 0.63
ATM-219ENST00000532931 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
ATM-219ENST00000532931 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
ATM-219ENST00000532931 FAM50AQ14320 339 aaKnown RBP18.98■□□□□ 0.63
ATM-219ENST00000532931 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
ATM-219ENST00000532931 BCORL1Q5H9F3 1711 aa18.97■□□□□ 0.63
ATM-219ENST00000532931 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
ATM-219ENST00000532931 AGLP35573 1532 aa18.95■□□□□ 0.62
ATM-219ENST00000532931 NCOA1Q15788 1441 aa18.92■□□□□ 0.62
ATM-219ENST00000532931 ROCK1Q13464 1354 aa18.92■□□□□ 0.62
ATM-219ENST00000532931 A2MP01023 1474 aa18.91■□□□□ 0.62
ATM-219ENST00000532931 EIF2AK4Q9P2K8 1649 aaKnown RBP18.91■□□□□ 0.62
ATM-219ENST00000532931 DUOX2Q9NRD8 1548 aa18.9■□□□□ 0.62
ATM-219ENST00000532931 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
ATM-219ENST00000532931 DHX29Q7Z478 1369 aaKnown RBP18.89■□□□□ 0.61
ATM-219ENST00000532931 ANKRD30AQ9BXX3 1397 aa18.89■□□□□ 0.61
ATM-219ENST00000532931 ADAMTSL3P82987 1691 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms