RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 GCC2Q8IWJ2 1684 aa20.83■□□□□ 0.93
SSH3-210ENST00000532881 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
SSH3-210ENST00000532881 EIF4G2P78344 907 aaKnown RBP eCLIP20.83■□□□□ 0.92
SSH3-210ENST00000532881 ABCC5O15440 1437 aa20.82■□□□□ 0.92
SSH3-210ENST00000532881 DAPK1P53355 1430 aa20.82■□□□□ 0.92
SSH3-210ENST00000532881 MIA2Q96PC5 1412 aa20.82■□□□□ 0.92
SSH3-210ENST00000532881 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
SSH3-210ENST00000532881 KIAA0556O60303 1618 aa20.79■□□□□ 0.92
SSH3-210ENST00000532881 PLB1Q6P1J6 1458 aa20.78■□□□□ 0.92
SSH3-210ENST00000532881 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
SSH3-210ENST00000532881 IFT140Q96RY7 1462 aa20.78■□□□□ 0.92
SSH3-210ENST00000532881 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
SSH3-210ENST00000532881 NEFLP07196 543 aa20.77■□□□□ 0.91
SSH3-210ENST00000532881 CFDP1Q9UEE9 299 aaPredicted RBP20.76■□□□□ 0.91
SSH3-210ENST00000532881 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
SSH3-210ENST00000532881 ANKRD30BQ9BXX2 1392 aa20.75■□□□□ 0.91
SSH3-210ENST00000532881 EIF4G3O43432 1585 aaKnown RBP20.74■□□□□ 0.91
SSH3-210ENST00000532881 SENP3-EIF4A1A0A087X0R7 540 aa20.74■□□□□ 0.91
SSH3-210ENST00000532881 FAM9BQ8IZU0 186 aa20.73■□□□□ 0.91
SSH3-210ENST00000532881 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
SSH3-210ENST00000532881 AKNAQ7Z591 1439 aa20.72■□□□□ 0.91
SSH3-210ENST00000532881 RAPGEF6Q8TEU7 1601 aa20.72■□□□□ 0.91
SSH3-210ENST00000532881 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
SSH3-210ENST00000532881 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
SSH3-210ENST00000532881 DNMT1P26358 1616 aaKnown RBP20.68■□□□□ 0.9
SSH3-210ENST00000532881 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
SSH3-210ENST00000532881 KIF14Q15058 1648 aa20.67■□□□□ 0.9
SSH3-210ENST00000532881 CCDC7Q96M83 1385 aa20.67■□□□□ 0.9
SSH3-210ENST00000532881 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
SSH3-210ENST00000532881 CEP170Q5SW79 1584 aa20.66■□□□□ 0.9
SSH3-210ENST00000532881 ROCK1Q13464 1354 aa20.66■□□□□ 0.9
SSH3-210ENST00000532881 PRKRIP1Q9H875 184 aaPredicted RBP20.65■□□□□ 0.9
SSH3-210ENST00000532881 CAMSAP2Q08AD1 1489 aa20.65■□□□□ 0.9
SSH3-210ENST00000532881 KIF7Q2M1P5 1343 aa20.65■□□□□ 0.9
SSH3-210ENST00000532881 TEX14Q8IWB6 1497 aa20.65■□□□□ 0.9
SSH3-210ENST00000532881 CNTLNQ9NXG0 1405 aa20.65■□□□□ 0.9
SSH3-210ENST00000532881 PKD2Q13563 968 aa20.64■□□□□ 0.9
SSH3-210ENST00000532881 MRS2Q9HD23 443 aa20.63■□□□□ 0.89
SSH3-210ENST00000532881 GPATCH8Q9UKJ3 1502 aaKnown RBP20.63■□□□□ 0.89
SSH3-210ENST00000532881 TROQ12816 1431 aaPredicted RBP20.63■□□□□ 0.89
SSH3-210ENST00000532881 NCOA1Q15788 1441 aa20.62■□□□□ 0.89
SSH3-210ENST00000532881 PZPP20742 1482 aa20.62■□□□□ 0.89
SSH3-210ENST00000532881 HNRNPMP52272 730 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSH3-210ENST00000532881 KDM2AQ9Y2K7 1162 aa20.57■□□□□ 0.88
SSH3-210ENST00000532881 RBM19Q9Y4C8 960 aaKnown RBP20.56■□□□□ 0.88
SSH3-210ENST00000532881 SPATA31E1Q6ZUB1 1445 aa20.56■□□□□ 0.88
SSH3-210ENST00000532881 SYNJ2O15056 1496 aa20.55■□□□□ 0.88
SSH3-210ENST00000532881 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
SSH3-210ENST00000532881 MAGI1Q96QZ7 1491 aaPredicted RBP20.52■□□□□ 0.88
SSH3-210ENST00000532881 NUP155O75694 1391 aa20.51■□□□□ 0.87
SSH3-210ENST00000532881 ANKRD50Q9ULJ7 1429 aa20.5■□□□□ 0.87
SSH3-210ENST00000532881 CARMIL2Q6F5E8 1435 aa20.49■□□□□ 0.87
SSH3-210ENST00000532881 KIAA1107Q9UPP5 1409 aa20.49■□□□□ 0.87
SSH3-210ENST00000532881 ANKRD30AQ9BXX3 1397 aa20.49■□□□□ 0.87
SSH3-210ENST00000532881 USP47Q96K76 1375 aa20.48■□□□□ 0.87
SSH3-210ENST00000532881 ATP10BO94823 1461 aa20.48■□□□□ 0.87
SSH3-210ENST00000532881 BCORL1Q5H9F3 1711 aa20.45■□□□□ 0.86
SSH3-210ENST00000532881 NUP160Q12769 1436 aa20.45■□□□□ 0.86
SSH3-210ENST00000532881 TSPY4P0CV99 314 aa20.44■□□□□ 0.86
SSH3-210ENST00000532881 TSPY10P0CW01 314 aa20.44■□□□□ 0.86
SSH3-210ENST00000532881 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
SSH3-210ENST00000532881 DCAF11Q8TEB1 546 aa20.43■□□□□ 0.86
SSH3-210ENST00000532881 C9orf84Q5VXU9 1444 aa20.43■□□□□ 0.86
SSH3-210ENST00000532881 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
SSH3-210ENST00000532881 CARD11Q9BXL7 1154 aa20.42■□□□□ 0.86
SSH3-210ENST00000532881 CDC42BPAQ5VT25 1732 aa20.42■□□□□ 0.86
SSH3-210ENST00000532881 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
SSH3-210ENST00000532881 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
SSH3-210ENST00000532881 MBD5Q9P267 1494 aa20.41■□□□□ 0.86
SSH3-210ENST00000532881 ADGRL2O95490 1459 aa20.4■□□□□ 0.86
SSH3-210ENST00000532881 MYT1Q01538 1121 aa20.4■□□□□ 0.86
SSH3-210ENST00000532881 CROCC2H7BZ55 1655 aa20.4■□□□□ 0.86
SSH3-210ENST00000532881 ST20-MTHFSA0A0A6YYL1 179 aa20.4■□□□□ 0.86
SSH3-210ENST00000532881 RGL3Q3MIN7 710 aa20.4■□□□□ 0.86
SSH3-210ENST00000532881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.4■□□□□ 0.86
SSH3-210ENST00000532881 ABCC10Q5T3U5 1492 aa20.39■□□□□ 0.86
SSH3-210ENST00000532881 ANP32EQ9BTT0 268 aa20.39■□□□□ 0.85
SSH3-210ENST00000532881 ADCY10Q96PN6 1610 aa20.38■□□□□ 0.85
SSH3-210ENST00000532881 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
SSH3-210ENST00000532881 ABCA8O94911 1581 aa20.37■□□□□ 0.85
SSH3-210ENST00000532881 ZBED9Q6R2W3 1325 aa20.37■□□□□ 0.85
SSH3-210ENST00000532881 MSH5O43196 834 aa20.34■□□□□ 0.85
SSH3-210ENST00000532881 PTPRGP23470 1445 aa20.34■□□□□ 0.85
SSH3-210ENST00000532881 KDM5CP41229 1560 aa20.32■□□□□ 0.84
SSH3-210ENST00000532881 SALL2Q9Y467 1007 aaPredicted RBP20.31■□□□□ 0.84
SSH3-210ENST00000532881 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
SSH3-210ENST00000532881 POLR1AO95602 1720 aaPredicted RBP20.3■□□□□ 0.84
SSH3-210ENST00000532881 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
SSH3-210ENST00000532881 TMC1Q8TDI8 760 aa20.28■□□□□ 0.84
SSH3-210ENST00000532881 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
SSH3-210ENST00000532881 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
SSH3-210ENST00000532881 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
SSH3-210ENST00000532881 RALGAPBQ86X10 1494 aa20.23■□□□□ 0.83
SSH3-210ENST00000532881 UHRF1BP1Q6BDS2 1440 aa20.22■□□□□ 0.83
SSH3-210ENST00000532881 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
SSH3-210ENST00000532881 SHANK2Q9UPX8 1470 aa20.22■□□□□ 0.83
SSH3-210ENST00000532881 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
SSH3-210ENST00000532881 SYCP2Q9BX26 1530 aa20.2■□□□□ 0.82
SSH3-210ENST00000532881 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
SSH3-210ENST00000532881 CCDC141Q6ZP82 1450 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms