RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 PHLDB1Q86UU1 1377 aa22.11■■□□□ 1.13
COL16A1-217ENST00000532877 ARAP3Q8WWN8 1544 aa22.11■■□□□ 1.13
COL16A1-217ENST00000532877 CDC42BPAQ5VT25 1732 aa22.08■■□□□ 1.12
COL16A1-217ENST00000532877 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
COL16A1-217ENST00000532877 MYO5CQ9NQX4 1742 aa22.07■■□□□ 1.12
COL16A1-217ENST00000532877 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
COL16A1-217ENST00000532877 PREX2Q70Z35 1606 aa22.06■■□□□ 1.12
COL16A1-217ENST00000532877 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
COL16A1-217ENST00000532877 GPATCH8Q9UKJ3 1502 aaKnown RBP22.05■■□□□ 1.12
COL16A1-217ENST00000532877 PTPRMP28827 1452 aa22.03■■□□□ 1.12
COL16A1-217ENST00000532877 CDC42BPBQ9Y5S2 1711 aa22.02■■□□□ 1.12
COL16A1-217ENST00000532877 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
COL16A1-217ENST00000532877 PLCH2O75038 1416 aa21.98■■□□□ 1.11
COL16A1-217ENST00000532877 MIA2Q96PC5 1412 aa21.97■■□□□ 1.11
COL16A1-217ENST00000532877 BCORL1Q5H9F3 1711 aa21.97■■□□□ 1.11
COL16A1-217ENST00000532877 ARHGAP5Q13017 1502 aa21.97■■□□□ 1.11
COL16A1-217ENST00000532877 RRBP1Q9P2E9 1410 aaKnown RBP21.96■■□□□ 1.11
COL16A1-217ENST00000532877 PTPN23Q9H3S7 1636 aa21.95■■□□□ 1.1
COL16A1-217ENST00000532877 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
COL16A1-217ENST00000532877 FRMPD1Q5SYB0 1578 aa21.94■■□□□ 1.1
COL16A1-217ENST00000532877 LMTK3Q96Q04 1460 aa21.93■■□□□ 1.1
COL16A1-217ENST00000532877 TCOF1Q13428 1488 aaKnown RBP21.92■■□□□ 1.1
COL16A1-217ENST00000532877 MADDQ8WXG6 1647 aa21.91■■□□□ 1.1
COL16A1-217ENST00000532877 SAMD9LQ8IVG5 1584 aa21.91■■□□□ 1.1
COL16A1-217ENST00000532877 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
COL16A1-217ENST00000532877 FANCAO15360 1455 aa21.9■■□□□ 1.1
COL16A1-217ENST00000532877 CAMSAP2Q08AD1 1489 aa21.9■■□□□ 1.1
COL16A1-217ENST00000532877 ZNF644Q9H582 1327 aaPredicted RBP21.86■■□□□ 1.09
COL16A1-217ENST00000532877 NEO1Q92859 1461 aa21.86■■□□□ 1.09
COL16A1-217ENST00000532877 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
COL16A1-217ENST00000532877 ZNF777Q9ULD5 760 aaPredicted RBP21.86■■□□□ 1.09
COL16A1-217ENST00000532877 ABCC1P33527 1531 aa21.85■■□□□ 1.09
COL16A1-217ENST00000532877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.85■■□□□ 1.09
COL16A1-217ENST00000532877 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.09
COL16A1-217ENST00000532877 SYCP2Q9BX26 1530 aa21.83■■□□□ 1.09
COL16A1-217ENST00000532877 PLEKHH2Q8IVE3 1493 aa21.83■■□□□ 1.08
COL16A1-217ENST00000532877 AKNAQ7Z591 1439 aa21.81■■□□□ 1.08
COL16A1-217ENST00000532877 RAPGEF3O95398 923 aa21.81■■□□□ 1.08
COL16A1-217ENST00000532877 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
COL16A1-217ENST00000532877 RIMS1Q86UR5 1692 aaKnown RBP21.8■■□□□ 1.08
COL16A1-217ENST00000532877 DNMT1P26358 1616 aaKnown RBP21.8■■□□□ 1.08
COL16A1-217ENST00000532877 ARHGEF40Q8TER5 1519 aa21.8■■□□□ 1.08
COL16A1-217ENST00000532877 KIAA1107Q9UPP5 1409 aa21.8■■□□□ 1.08
COL16A1-217ENST00000532877 TRIM26Q12899 539 aaPredicted RBP21.79■■□□□ 1.08
COL16A1-217ENST00000532877 ARHGEF12Q9NZN5 1544 aa21.79■■□□□ 1.08
COL16A1-217ENST00000532877 ARHGEF5Q12774 1597 aa21.78■■□□□ 1.08
COL16A1-217ENST00000532877 SIGLEC1Q9BZZ2 1709 aa21.77■■□□□ 1.08
COL16A1-217ENST00000532877 MBD5Q9P267 1494 aa21.77■■□□□ 1.08
COL16A1-217ENST00000532877 CROCC2H7BZ55 1655 aa21.76■■□□□ 1.07
COL16A1-217ENST00000532877 SCAPERQ9BY12 1400 aa21.75■■□□□ 1.07
COL16A1-217ENST00000532877 DAPK1P53355 1430 aa21.74■■□□□ 1.07
COL16A1-217ENST00000532877 CCDC141Q6ZP82 1450 aa21.74■■□□□ 1.07
COL16A1-217ENST00000532877 HNRNPMP52272 730 aaKnown RBP eCLIP21.73■■□□□ 1.07
COL16A1-217ENST00000532877 ABCC5O15440 1437 aa21.72■■□□□ 1.07
COL16A1-217ENST00000532877 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
COL16A1-217ENST00000532877 POGZQ7Z3K3 1410 aa21.71■■□□□ 1.07
COL16A1-217ENST00000532877 PTPRKQ15262 1439 aa21.7■■□□□ 1.06
COL16A1-217ENST00000532877 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.06
COL16A1-217ENST00000532877 SHANK2Q9UPX8 1470 aa21.7■■□□□ 1.06
COL16A1-217ENST00000532877 ZNF518AQ6AHZ1 1483 aa21.69■■□□□ 1.06
COL16A1-217ENST00000532877 ZMYM4Q5VZL5 1548 aa21.69■■□□□ 1.06
COL16A1-217ENST00000532877 ITGAEP38570 1179 aa21.68■■□□□ 1.06
COL16A1-217ENST00000532877 KDM5CP41229 1560 aa21.67■■□□□ 1.06
COL16A1-217ENST00000532877 RSPH4AQ5TD94 716 aa21.67■■□□□ 1.06
COL16A1-217ENST00000532877 MAST1Q9Y2H9 1570 aa21.66■■□□□ 1.06
COL16A1-217ENST00000532877 C9orf84Q5VXU9 1444 aa21.65■■□□□ 1.06
COL16A1-217ENST00000532877 HSPA2P54652 639 aa21.65■■□□□ 1.06
COL16A1-217ENST00000532877 ADGBQ8N7X0 1667 aa21.65■■□□□ 1.06
COL16A1-217ENST00000532877 INO80Q9ULG1 1556 aaPredicted RBP21.63■■□□□ 1.05
COL16A1-217ENST00000532877 AFAP1Q8N556 730 aa21.63■■□□□ 1.05
COL16A1-217ENST00000532877 ZFYVE16Q7Z3T8 1539 aa21.63■■□□□ 1.05
COL16A1-217ENST00000532877 ARID4BQ4LE39 1312 aaPredicted RBP21.62■■□□□ 1.05
COL16A1-217ENST00000532877 CERKQ8TCT0 537 aa21.62■■□□□ 1.05
COL16A1-217ENST00000532877 FER1L4A9Z1Z3 1794 aa21.61■■□□□ 1.05
COL16A1-217ENST00000532877 ADGRL2O95490 1459 aa21.61■■□□□ 1.05
COL16A1-217ENST00000532877 PCGF6Q9BYE7 350 aa21.61■■□□□ 1.05
COL16A1-217ENST00000532877 TSPY4P0CV99 314 aa21.6■■□□□ 1.05
COL16A1-217ENST00000532877 TSPY10P0CW01 314 aa21.6■■□□□ 1.05
COL16A1-217ENST00000532877 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
COL16A1-217ENST00000532877 CHIC2Q9UKJ5 165 aa21.59■■□□□ 1.05
COL16A1-217ENST00000532877 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.05
COL16A1-217ENST00000532877 PLXNC1O60486 1568 aa21.58■■□□□ 1.05
COL16A1-217ENST00000532877 RTEL1-TNFRSF6BF6WH68 1400 aa21.58■■□□□ 1.05
COL16A1-217ENST00000532877 YEATS2Q9ULM3 1422 aa21.58■■□□□ 1.05
COL16A1-217ENST00000532877 KIDINS220Q9ULH0 1771 aa21.58■■□□□ 1.04
COL16A1-217ENST00000532877 ROCK1Q13464 1354 aa21.58■■□□□ 1.04
COL16A1-217ENST00000532877 MAGI2Q86UL8 1455 aa21.57■■□□□ 1.04
COL16A1-217ENST00000532877 MLH3Q9UHC1 1453 aa21.57■■□□□ 1.04
COL16A1-217ENST00000532877 STRCQ7RTU9 1775 aa21.56■■□□□ 1.04
COL16A1-217ENST00000532877 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
COL16A1-217ENST00000532877 ANKRD30AQ9BXX3 1397 aa21.55■■□□□ 1.04
COL16A1-217ENST00000532877 PREX1Q8TCU6 1659 aa21.55■■□□□ 1.04
COL16A1-217ENST00000532877 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
COL16A1-217ENST00000532877 ILDR2Q71H61 639 aa21.54■■□□□ 1.04
COL16A1-217ENST00000532877 HFM1A2PYH4 1435 aa21.54■■□□□ 1.04
COL16A1-217ENST00000532877 ABCA6Q8N139 1617 aa21.53■■□□□ 1.04
COL16A1-217ENST00000532877 KIF15Q9NS87 1388 aa21.5■■□□□ 1.03
COL16A1-217ENST00000532877 DIP2CQ9Y2E4 1556 aa21.5■■□□□ 1.03
COL16A1-217ENST00000532877 NAIPQ13075 1403 aa21.5■■□□□ 1.03
COL16A1-217ENST00000532877 RRP7BPQ9NSQ0 103 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms