RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 WDR7Q9Y4E6 1490 aa12.72□□□□□ -0.37
TRIM49-202ENST00000532501 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.38
TRIM49-202ENST00000532501 DIP2BQ9P265 1576 aa12.7□□□□□ -0.38
TRIM49-202ENST00000532501 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
TRIM49-202ENST00000532501 KANK4Q5T7N3 995 aaPredicted RBP12.69□□□□□ -0.38
TRIM49-202ENST00000532501 CCDC18Q5T9S5 1454 aa12.68□□□□□ -0.38
TRIM49-202ENST00000532501 TIAM1Q13009 1591 aa12.68□□□□□ -0.38
TRIM49-202ENST00000532501 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
TRIM49-202ENST00000532501 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
TRIM49-202ENST00000532501 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
TRIM49-202ENST00000532501 KIF14Q15058 1648 aa12.66□□□□□ -0.38
TRIM49-202ENST00000532501 CFAP43Q8NDM7 1665 aa12.66□□□□□ -0.38
TRIM49-202ENST00000532501 FAM69CQ0P6D2 419 aa12.65□□□□□ -0.38
TRIM49-202ENST00000532501 PLEKHD1A6NEE1 506 aa12.63□□□□□ -0.39
TRIM49-202ENST00000532501 KIF13AQ9H1H9 1805 aa12.63□□□□□ -0.39
TRIM49-202ENST00000532501 TTC37Q6PGP7 1564 aa12.63□□□□□ -0.39
TRIM49-202ENST00000532501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRIM49-202ENST00000532501 LRRC9Q6ZRR7 1453 aa12.62□□□□□ -0.39
TRIM49-202ENST00000532501 PPARGC1BQ86YN6 1023 aaKnown RBP12.62□□□□□ -0.39
TRIM49-202ENST00000532501 GLI2P10070 1586 aa12.61□□□□□ -0.39
TRIM49-202ENST00000532501 EVX2Q03828 476 aa12.61□□□□□ -0.39
TRIM49-202ENST00000532501 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
TRIM49-202ENST00000532501 MTUS2Q5JR59 1369 aa12.6□□□□□ -0.39
TRIM49-202ENST00000532501 EHBP1L1Q8N3D4 1523 aa12.6□□□□□ -0.39
TRIM49-202ENST00000532501 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIM49-202ENST00000532501 ABCA9Q8IUA7 1624 aa12.59□□□□□ -0.39
TRIM49-202ENST00000532501 PPRC1Q5VV67 1664 aaKnown RBP12.58□□□□□ -0.4
TRIM49-202ENST00000532501 MAP3K4Q9Y6R4 1608 aa12.57□□□□□ -0.4
TRIM49-202ENST00000532501 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
TRIM49-202ENST00000532501 CD109Q6YHK3 1445 aa12.57□□□□□ -0.4
TRIM49-202ENST00000532501 NCOA2Q15596 1464 aa12.57□□□□□ -0.4
TRIM49-202ENST00000532501 CDK11AQ9UQ88 783 aaPredicted RBP12.56□□□□□ -0.4
TRIM49-202ENST00000532501 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
TRIM49-202ENST00000532501 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
TRIM49-202ENST00000532501 GPATCH8Q9UKJ3 1502 aaKnown RBP12.54□□□□□ -0.4
TRIM49-202ENST00000532501 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
TRIM49-202ENST00000532501 LHX8Q68G74 356 aa12.53□□□□□ -0.4
TRIM49-202ENST00000532501 PLCH2O75038 1416 aa12.52□□□□□ -0.41
TRIM49-202ENST00000532501 TSPOAP1O95153 1857 aa12.52□□□□□ -0.41
TRIM49-202ENST00000532501 ZNF644Q9H582 1327 aaPredicted RBP12.49□□□□□ -0.41
TRIM49-202ENST00000532501 SUPT6HQ7KZ85 1726 aaKnown RBP12.49□□□□□ -0.41
TRIM49-202ENST00000532501 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
TRIM49-202ENST00000532501 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
TRIM49-202ENST00000532501 CDC42BPAQ5VT25 1732 aa12.49□□□□□ -0.41
TRIM49-202ENST00000532501 FANCAO15360 1455 aa12.48□□□□□ -0.41
TRIM49-202ENST00000532501 ARHGEF12Q9NZN5 1544 aa12.48□□□□□ -0.41
TRIM49-202ENST00000532501 CDC42BPBQ9Y5S2 1711 aa12.47□□□□□ -0.41
TRIM49-202ENST00000532501 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
TRIM49-202ENST00000532501 MYO5CQ9NQX4 1742 aa12.46□□□□□ -0.41
TRIM49-202ENST00000532501 SAMD9LQ8IVG5 1584 aa12.46□□□□□ -0.42
TRIM49-202ENST00000532501 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.42
TRIM49-202ENST00000532501 ARAP3Q8WWN8 1544 aa12.46□□□□□ -0.42
TRIM49-202ENST00000532501 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
TRIM49-202ENST00000532501 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
TRIM49-202ENST00000532501 NEO1Q92859 1461 aa12.44□□□□□ -0.42
TRIM49-202ENST00000532501 CFDP1Q9UEE9 299 aaPredicted RBP12.44□□□□□ -0.42
TRIM49-202ENST00000532501 ZNF777Q9ULD5 760 aaPredicted RBP12.44□□□□□ -0.42
TRIM49-202ENST00000532501 TEX14Q8IWB6 1497 aa12.44□□□□□ -0.42
TRIM49-202ENST00000532501 FRMPD1Q5SYB0 1578 aa12.44□□□□□ -0.42
TRIM49-202ENST00000532501 ABCC1P33527 1531 aa12.43□□□□□ -0.42
TRIM49-202ENST00000532501 FGD6Q6ZV73 1430 aa12.43□□□□□ -0.42
TRIM49-202ENST00000532501 TRAPPC8Q9Y2L5 1435 aa12.43□□□□□ -0.42
TRIM49-202ENST00000532501 EFCAB2Q5VUJ9 269 aa12.43□□□□□ -0.42
TRIM49-202ENST00000532501 ADGRL1O94910 1474 aa12.42□□□□□ -0.42
TRIM49-202ENST00000532501 CAMSAP2Q08AD1 1489 aa12.42□□□□□ -0.42
TRIM49-202ENST00000532501 RAPGEF3O95398 923 aa12.42□□□□□ -0.42
TRIM49-202ENST00000532501 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
TRIM49-202ENST00000532501 SCAPERQ9BY12 1400 aa12.42□□□□□ -0.42
TRIM49-202ENST00000532501 MBD5Q9P267 1494 aa12.41□□□□□ -0.42
TRIM49-202ENST00000532501 ITSN2Q9NZM3 1697 aa12.4□□□□□ -0.43
TRIM49-202ENST00000532501 POGZQ7Z3K3 1410 aa12.39□□□□□ -0.43
TRIM49-202ENST00000532501 HNRNPMP52272 730 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRIM49-202ENST00000532501 MIA2Q96PC5 1412 aa12.38□□□□□ -0.43
TRIM49-202ENST00000532501 KDM6BO15054 1643 aa12.38□□□□□ -0.43
TRIM49-202ENST00000532501 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
TRIM49-202ENST00000532501 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
TRIM49-202ENST00000532501 DENND4BO75064 1496 aaPredicted RBP12.38□□□□□ -0.43
TRIM49-202ENST00000532501 TCOF1Q13428 1488 aaKnown RBP12.38□□□□□ -0.43
TRIM49-202ENST00000532501 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
TRIM49-202ENST00000532501 CFAP74Q9C0B2 1584 aa12.37□□□□□ -0.43
TRIM49-202ENST00000532501 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
TRIM49-202ENST00000532501 RICTORQ6R327 1708 aa12.36□□□□□ -0.43
TRIM49-202ENST00000532501 PTPRKQ15262 1439 aa12.35□□□□□ -0.43
TRIM49-202ENST00000532501 RRBP1Q9P2E9 1410 aaKnown RBP12.35□□□□□ -0.43
TRIM49-202ENST00000532501 YEATS2Q9ULM3 1422 aa12.35□□□□□ -0.43
TRIM49-202ENST00000532501 ABCC5O15440 1437 aa12.34□□□□□ -0.43
TRIM49-202ENST00000532501 KDM5CP41229 1560 aa12.34□□□□□ -0.43
TRIM49-202ENST00000532501 KCNA4P22459 653 aa12.34□□□□□ -0.43
TRIM49-202ENST00000532501 FAM50AQ14320 339 aaKnown RBP12.33□□□□□ -0.44
TRIM49-202ENST00000532501 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
TRIM49-202ENST00000532501 CCDC141Q6ZP82 1450 aa12.32□□□□□ -0.44
TRIM49-202ENST00000532501 PLEKHH2Q8IVE3 1493 aa12.32□□□□□ -0.44
TRIM49-202ENST00000532501 ZNF518AQ6AHZ1 1483 aa12.31□□□□□ -0.44
TRIM49-202ENST00000532501 ARHGEF5Q12774 1597 aa12.31□□□□□ -0.44
TRIM49-202ENST00000532501 ZFYVE16Q7Z3T8 1539 aa12.31□□□□□ -0.44
TRIM49-202ENST00000532501 DAPK1P53355 1430 aa12.3□□□□□ -0.44
TRIM49-202ENST00000532501 GABBR2O75899 941 aa12.3□□□□□ -0.44
TRIM49-202ENST00000532501 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
TRIM49-202ENST00000532501 INO80Q9ULG1 1556 aaPredicted RBP12.28□□□□□ -0.44
TRIM49-202ENST00000532501 ARHGEF40Q8TER5 1519 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms