RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 TEX14Q8IWB6 1497 aa33.21■■■□□ 2.91
PACSIN3-209ENST00000532457 MYO5CQ9NQX4 1742 aa33.21■■■□□ 2.91
PACSIN3-209ENST00000532457 MIA2Q96PC5 1412 aa33.21■■■□□ 2.91
PACSIN3-209ENST00000532457 PLCH2O75038 1416 aa33.2■■■□□ 2.91
PACSIN3-209ENST00000532457 PTPN23Q9H3S7 1636 aa33.2■■■□□ 2.91
PACSIN3-209ENST00000532457 ZNF644Q9H582 1327 aaPredicted RBP33.18■■■□□ 2.9
PACSIN3-209ENST00000532457 TCOF1Q13428 1488 aaKnown RBP33.17■■■□□ 2.9
PACSIN3-209ENST00000532457 ARAP3Q8WWN8 1544 aa33.17■■■□□ 2.9
PACSIN3-209ENST00000532457 PPRC1Q5VV67 1664 aaKnown RBP33.15■■■□□ 2.9
PACSIN3-209ENST00000532457 CFDP1Q9UEE9 299 aaPredicted RBP33.15■■■□□ 2.9
PACSIN3-209ENST00000532457 CDC42BPAQ5VT25 1732 aa33.14■■■□□ 2.9
PACSIN3-209ENST00000532457 EFCAB2Q5VUJ9 269 aa33.13■■■□□ 2.89
PACSIN3-209ENST00000532457 PREX2Q70Z35 1606 aa33.13■■■□□ 2.89
PACSIN3-209ENST00000532457 ARHGAP5Q13017 1502 aa33.11■■■□□ 2.89
PACSIN3-209ENST00000532457 ITSN2Q9NZM3 1697 aa33.11■■■□□ 2.89
PACSIN3-209ENST00000532457 FANCAO15360 1455 aa33.11■■■□□ 2.89
PACSIN3-209ENST00000532457 CFAP74Q9C0B2 1584 aa33.09■■■□□ 2.89
PACSIN3-209ENST00000532457 NEO1Q92859 1461 aa33.09■■■□□ 2.89
PACSIN3-209ENST00000532457 PTPRKQ15262 1439 aa33.09■■■□□ 2.89
PACSIN3-209ENST00000532457 CDC42BPBQ9Y5S2 1711 aa33.08■■■□□ 2.89
PACSIN3-209ENST00000532457 ZNF777Q9ULD5 760 aaPredicted RBP33.07■■■□□ 2.89
PACSIN3-209ENST00000532457 AKNAQ7Z591 1439 aa33.01■■■□□ 2.88
PACSIN3-209ENST00000532457 CAMSAP2Q08AD1 1489 aa33■■■□□ 2.87
PACSIN3-209ENST00000532457 ADGRL1O94910 1474 aa32.94■■■□□ 2.86
PACSIN3-209ENST00000532457 ABCC5O15440 1437 aa32.93■■■□□ 2.86
PACSIN3-209ENST00000532457 PLEKHH2Q8IVE3 1493 aa32.92■■■□□ 2.86
PACSIN3-209ENST00000532457 CHIC2Q9UKJ5 165 aa32.91■■■□□ 2.86
PACSIN3-209ENST00000532457 DAPK1P53355 1430 aa32.9■■■□□ 2.86
PACSIN3-209ENST00000532457 SAMD9LQ8IVG5 1584 aa32.89■■■□□ 2.86
PACSIN3-209ENST00000532457 SCAPERQ9BY12 1400 aa32.89■■■□□ 2.86
PACSIN3-209ENST00000532457 KDM6BO15054 1643 aa32.89■■■□□ 2.86
PACSIN3-209ENST00000532457 HNRNPMP52272 730 aaKnown RBP eCLIP32.88■■■□□ 2.85
PACSIN3-209ENST00000532457 DNMT1P26358 1616 aaKnown RBP32.87■■■□□ 2.85
PACSIN3-209ENST00000532457 KIAA1107Q9UPP5 1409 aa32.87■■■□□ 2.85
PACSIN3-209ENST00000532457 ABCC1P33527 1531 aa32.86■■■□□ 2.85
PACSIN3-209ENST00000532457 DENND4BO75064 1496 aaPredicted RBP32.86■■■□□ 2.85
PACSIN3-209ENST00000532457 SETD5Q9C0A6 1442 aa32.84■■■□□ 2.85
PACSIN3-209ENST00000532457 MBD5Q9P267 1494 aa32.83■■■□□ 2.85
PACSIN3-209ENST00000532457 COL17A1Q9UMD9 1497 aaPredicted RBP32.82■■■□□ 2.84
PACSIN3-209ENST00000532457 SYCP2Q9BX26 1530 aa32.8■■■□□ 2.84
PACSIN3-209ENST00000532457 RRP7BPQ9NSQ0 103 aa32.8■■■□□ 2.84
PACSIN3-209ENST00000532457 RAB3GAP2Q9H2M9 1393 aa32.8■■■□□ 2.84
PACSIN3-209ENST00000532457 RAPGEF3O95398 923 aa32.79■■■□□ 2.84
PACSIN3-209ENST00000532457 RSPH4AQ5TD94 716 aa32.79■■■□□ 2.84
PACSIN3-209ENST00000532457 ZNF518AQ6AHZ1 1483 aa32.78■■■□□ 2.84
PACSIN3-209ENST00000532457 POGZQ7Z3K3 1410 aa32.78■■■□□ 2.84
PACSIN3-209ENST00000532457 ARHGEF12Q9NZN5 1544 aa32.77■■■□□ 2.84
PACSIN3-209ENST00000532457 HFM1A2PYH4 1435 aa32.76■■■□□ 2.84
PACSIN3-209ENST00000532457 NAIPQ13075 1403 aa32.75■■■□□ 2.83
PACSIN3-209ENST00000532457 RICTORQ6R327 1708 aa32.73■■■□□ 2.83
PACSIN3-209ENST00000532457 AFAP1Q8N556 730 aa32.73■■■□□ 2.83
PACSIN3-209ENST00000532457 CCER1Q8TC90 406 aaPredicted RBP32.72■■■□□ 2.83
PACSIN3-209ENST00000532457 TRAPPC8Q9Y2L5 1435 aa32.72■■■□□ 2.83
PACSIN3-209ENST00000532457 ARHGEF5Q12774 1597 aa32.72■■■□□ 2.83
PACSIN3-209ENST00000532457 ROCK1Q13464 1354 aa32.7■■■□□ 2.83
PACSIN3-209ENST00000532457 CROCC2H7BZ55 1655 aa32.69■■■□□ 2.82
PACSIN3-209ENST00000532457 FRMPD1Q5SYB0 1578 aa32.68■■■□□ 2.82
PACSIN3-209ENST00000532457 CCDC141Q6ZP82 1450 aa32.68■■■□□ 2.82
PACSIN3-209ENST00000532457 HRCP23327 699 aa32.67■■■□□ 2.82
PACSIN3-209ENST00000532457 TSPY4P0CV99 314 aa32.66■■■□□ 2.82
PACSIN3-209ENST00000532457 TSPY10P0CW01 314 aa32.66■■■□□ 2.82
PACSIN3-209ENST00000532457 KDM5CP41229 1560 aa32.66■■■□□ 2.82
PACSIN3-209ENST00000532457 NCOA1Q15788 1441 aa32.66■■■□□ 2.82
PACSIN3-209ENST00000532457 C9orf84Q5VXU9 1444 aa32.64■■■□□ 2.82
PACSIN3-209ENST00000532457 ZMYM4Q5VZL5 1548 aa32.64■■■□□ 2.82
PACSIN3-209ENST00000532457 MYT1LQ9UL68 1186 aa32.63■■■□□ 2.81
PACSIN3-209ENST00000532457 ADGRL2O95490 1459 aa32.63■■■□□ 2.81
PACSIN3-209ENST00000532457 SPAG9O60271 1321 aaKnown RBP32.63■■■□□ 2.81
PACSIN3-209ENST00000532457 MAGI2Q86UL8 1455 aa32.62■■■□□ 2.81
PACSIN3-209ENST00000532457 SHANK2Q9UPX8 1470 aa32.62■■■□□ 2.81
PACSIN3-209ENST00000532457 MLH3Q9UHC1 1453 aa32.6■■■□□ 2.81
PACSIN3-209ENST00000532457 DHX57Q6P158 1386 aaKnown RBP32.6■■■□□ 2.81
PACSIN3-209ENST00000532457 GCC2Q8IWJ2 1684 aa32.58■■■□□ 2.81
PACSIN3-209ENST00000532457 HECW2Q9P2P5 1572 aa32.58■■■□□ 2.81
PACSIN3-209ENST00000532457 ANKRD30AQ9BXX3 1397 aa32.57■■■□□ 2.8
PACSIN3-209ENST00000532457 ADGBQ8N7X0 1667 aa32.57■■■□□ 2.8
PACSIN3-209ENST00000532457 RTEL1-TNFRSF6BF6WH68 1400 aa32.55■■■□□ 2.8
PACSIN3-209ENST00000532457 ZFYVE16Q7Z3T8 1539 aa32.53■■■□□ 2.8
PACSIN3-209ENST00000532457 ATP7AQ04656 1500 aa32.52■■■□□ 2.8
PACSIN3-209ENST00000532457 INO80Q9ULG1 1556 aaPredicted RBP32.5■■■□□ 2.79
PACSIN3-209ENST00000532457 MAST1Q9Y2H9 1570 aa32.5■■■□□ 2.79
PACSIN3-209ENST00000532457 KIDINS220Q9ULH0 1771 aa32.49■■■□□ 2.79
PACSIN3-209ENST00000532457 YEATS2Q9ULM3 1422 aa32.47■■■□□ 2.79
PACSIN3-209ENST00000532457 ARHGEF40Q8TER5 1519 aa32.47■■■□□ 2.79
PACSIN3-209ENST00000532457 KIF15Q9NS87 1388 aa32.46■■■□□ 2.79
PACSIN3-209ENST00000532457 ATP10AO60312 1499 aa32.42■■■□□ 2.78
PACSIN3-209ENST00000532457 ANKRD50Q9ULJ7 1429 aa32.41■■■□□ 2.78
PACSIN3-209ENST00000532457 ABCA6Q8N139 1617 aa32.41■■■□□ 2.78
PACSIN3-209ENST00000532457 DIP2CQ9Y2E4 1556 aa32.4■■■□□ 2.78
PACSIN3-209ENST00000532457 TRIM52Q96A61 297 aa32.38■■■□□ 2.77
PACSIN3-209ENST00000532457 PLXNC1O60486 1568 aa32.38■■■□□ 2.77
PACSIN3-209ENST00000532457 ZEB1P37275 1124 aaPredicted RBP32.35■■■□□ 2.77
PACSIN3-209ENST00000532457 REREQ9P2R6 1566 aa32.33■■■□□ 2.77
PACSIN3-209ENST00000532457 A2MP01023 1474 aa32.32■■■□□ 2.76
PACSIN3-209ENST00000532457 DHX29Q7Z478 1369 aaKnown RBP32.3■■■□□ 2.76
PACSIN3-209ENST00000532457 CLSPNQ9HAW4 1339 aa32.29■■■□□ 2.76
PACSIN3-209ENST00000532457 DUOX2Q9NRD8 1548 aa32.28■■■□□ 2.76
PACSIN3-209ENST00000532457 ARID4BQ4LE39 1312 aaPredicted RBP32.28■■■□□ 2.76
PACSIN3-209ENST00000532457 MPHOSPH9Q99550 1183 aa32.27■■■□□ 2.76
PACSIN3-209ENST00000532457 ACIN1Q9UKV3 1341 aaKnown RBP32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms