RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 MPHOSPH9Q99550 1183 aa20.53■□□□□ 0.88
NXF1-213ENST00000532297 WDR62O43379 1518 aa20.52■□□□□ 0.88
NXF1-213ENST00000532297 L3MBTL2Q969R5 705 aa20.52■□□□□ 0.88
NXF1-213ENST00000532297 TCOF1Q13428 1488 aaKnown RBP20.51■□□□□ 0.87
NXF1-213ENST00000532297 DEKP35659 375 aaKnown RBP20.5■□□□□ 0.87
NXF1-213ENST00000532297 PPP4R2Q9NY27 417 aa20.46■□□□□ 0.87
NXF1-213ENST00000532297 NBPF8Q3BBV2 869 aa20.46■□□□□ 0.87
NXF1-213ENST00000532297 ERICH6BQ5W0A0 696 aa20.46■□□□□ 0.87
NXF1-213ENST00000532297 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
NXF1-213ENST00000532297 EIF4G2P78344 907 aaKnown RBP eCLIP20.42■□□□□ 0.86
NXF1-213ENST00000532297 DAPK1P53355 1430 aa20.42■□□□□ 0.86
NXF1-213ENST00000532297 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
NXF1-213ENST00000532297 DISP1Q96F81 1524 aa20.4■□□□□ 0.86
NXF1-213ENST00000532297 ZNF777Q9ULD5 760 aaPredicted RBP20.4■□□□□ 0.86
NXF1-213ENST00000532297 NUP153P49790 1475 aaKnown RBP20.39■□□□□ 0.86
NXF1-213ENST00000532297 ABCC5O15440 1437 aa20.39■□□□□ 0.85
NXF1-213ENST00000532297 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
NXF1-213ENST00000532297 KIAA0556O60303 1618 aa20.38■□□□□ 0.85
NXF1-213ENST00000532297 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
NXF1-213ENST00000532297 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
NXF1-213ENST00000532297 PRG4Q92954 1404 aaPredicted RBP20.37■□□□□ 0.85
NXF1-213ENST00000532297 B4GALNT3Q6L9W6 998 aa20.37■□□□□ 0.85
NXF1-213ENST00000532297 POLR3GLQ9BT43 218 aa20.36■□□□□ 0.85
NXF1-213ENST00000532297 MIA2Q96PC5 1412 aa20.36■□□□□ 0.85
NXF1-213ENST00000532297 FBLN2P98095 1184 aa20.35■□□□□ 0.85
NXF1-213ENST00000532297 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
NXF1-213ENST00000532297 PRKCSHP14314 528 aaPredicted RBP20.34■□□□□ 0.85
NXF1-213ENST00000532297 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
NXF1-213ENST00000532297 AKNAQ7Z591 1439 aa20.34■□□□□ 0.85
NXF1-213ENST00000532297 NBR1Q14596 966 aa20.34■□□□□ 0.85
NXF1-213ENST00000532297 NOP58Q9Y2X3 529 aaKnown RBP20.34■□□□□ 0.85
NXF1-213ENST00000532297 DNMT1P26358 1616 aaKnown RBP20.33■□□□□ 0.85
NXF1-213ENST00000532297 CCDC7Q96M83 1385 aa20.33■□□□□ 0.85
NXF1-213ENST00000532297 TEX14Q8IWB6 1497 aa20.33■□□□□ 0.84
NXF1-213ENST00000532297 PLB1Q6P1J6 1458 aa20.32■□□□□ 0.84
NXF1-213ENST00000532297 RAPGEF6Q8TEU7 1601 aa20.32■□□□□ 0.84
NXF1-213ENST00000532297 KIF14Q15058 1648 aa20.3■□□□□ 0.84
NXF1-213ENST00000532297 RPRD2Q5VT52 1461 aaKnown RBP20.3■□□□□ 0.84
NXF1-213ENST00000532297 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
NXF1-213ENST00000532297 NCOA1Q15788 1441 aa20.3■□□□□ 0.84
NXF1-213ENST00000532297 MRS2Q9HD23 443 aa20.29■□□□□ 0.84
NXF1-213ENST00000532297 KIF7Q2M1P5 1343 aa20.29■□□□□ 0.84
NXF1-213ENST00000532297 PRKRIP1Q9H875 184 aaPredicted RBP20.29■□□□□ 0.84
NXF1-213ENST00000532297 PAK3O75914 559 aaPredicted RBP20.27■□□□□ 0.84
NXF1-213ENST00000532297 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
NXF1-213ENST00000532297 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.83
NXF1-213ENST00000532297 CAMSAP2Q08AD1 1489 aa20.26■□□□□ 0.83
NXF1-213ENST00000532297 CFDP1Q9UEE9 299 aaPredicted RBP20.26■□□□□ 0.83
NXF1-213ENST00000532297 PZPP20742 1482 aa20.25■□□□□ 0.83
NXF1-213ENST00000532297 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
NXF1-213ENST00000532297 ROCK1Q13464 1354 aa20.22■□□□□ 0.83
NXF1-213ENST00000532297 CEP170Q5SW79 1584 aa20.22■□□□□ 0.83
NXF1-213ENST00000532297 CHMP7Q8WUX9 453 aaPredicted RBP20.2■□□□□ 0.82
NXF1-213ENST00000532297 ZBED9Q6R2W3 1325 aa20.2■□□□□ 0.82
NXF1-213ENST00000532297 PKD2Q13563 968 aa20.19■□□□□ 0.82
NXF1-213ENST00000532297 SPATA31E1Q6ZUB1 1445 aa20.19■□□□□ 0.82
NXF1-213ENST00000532297 BCORL1Q5H9F3 1711 aa20.19■□□□□ 0.82
NXF1-213ENST00000532297 TROQ12816 1431 aaPredicted RBP20.18■□□□□ 0.82
NXF1-213ENST00000532297 GPATCH8Q9UKJ3 1502 aaKnown RBP20.17■□□□□ 0.82
NXF1-213ENST00000532297 ANP32AP39687 249 aaKnown RBP20.14■□□□□ 0.81
NXF1-213ENST00000532297 RTL5Q5HYW3 569 aaPredicted RBP20.13■□□□□ 0.81
NXF1-213ENST00000532297 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
NXF1-213ENST00000532297 KDM2AQ9Y2K7 1162 aa20.13■□□□□ 0.81
NXF1-213ENST00000532297 ADGBQ8N7X0 1667 aa20.13■□□□□ 0.81
NXF1-213ENST00000532297 ANO8Q9HCE9 1232 aaPredicted RBP20.12■□□□□ 0.81
NXF1-213ENST00000532297 USP47Q96K76 1375 aa20.12■□□□□ 0.81
NXF1-213ENST00000532297 IPO9Q96P70 1041 aaKnown RBP20.12■□□□□ 0.81
NXF1-213ENST00000532297 CROCC2H7BZ55 1655 aa20.11■□□□□ 0.81
NXF1-213ENST00000532297 POLR1AO95602 1720 aaPredicted RBP20.1■□□□□ 0.81
NXF1-213ENST00000532297 ITSN2Q9NZM3 1697 aa20.1■□□□□ 0.81
NXF1-213ENST00000532297 KIAA1107Q9UPP5 1409 aa20.09■□□□□ 0.81
NXF1-213ENST00000532297 ZBTB47Q9UFB7 747 aaPredicted RBP20.09■□□□□ 0.81
NXF1-213ENST00000532297 MBD5Q9P267 1494 aa20.09■□□□□ 0.81
NXF1-213ENST00000532297 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.81
NXF1-213ENST00000532297 JPH4Q96JJ6 628 aa20.08■□□□□ 0.81
NXF1-213ENST00000532297 CDC42BPAQ5VT25 1732 aa20.07■□□□□ 0.8
NXF1-213ENST00000532297 CCDC136Q96JN2 1154 aa20.07■□□□□ 0.8
NXF1-213ENST00000532297 ANKRD50Q9ULJ7 1429 aa20.07■□□□□ 0.8
NXF1-213ENST00000532297 HNRNPMP52272 730 aaKnown RBP eCLIP20.06■□□□□ 0.82e-7■□□□□ 9.4
NXF1-213ENST00000532297 NUP155O75694 1391 aa20.06■□□□□ 0.8
NXF1-213ENST00000532297 SYNJ2O15056 1496 aa20.04■□□□□ 0.8
NXF1-213ENST00000532297 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
NXF1-213ENST00000532297 KDM5CP41229 1560 aa20.03■□□□□ 0.8
NXF1-213ENST00000532297 ADCY10Q96PN6 1610 aa20.03■□□□□ 0.8
NXF1-213ENST00000532297 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
NXF1-213ENST00000532297 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
NXF1-213ENST00000532297 C9orf84Q5VXU9 1444 aa20.01■□□□□ 0.79
NXF1-213ENST00000532297 ADGRL2O95490 1459 aa20■□□□□ 0.79
NXF1-213ENST00000532297 SALL2Q9Y467 1007 aaPredicted RBP20■□□□□ 0.79
NXF1-213ENST00000532297 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
NXF1-213ENST00000532297 PLEKHD1A6NEE1 506 aa19.99■□□□□ 0.79
NXF1-213ENST00000532297 ATP10BO94823 1461 aa19.99■□□□□ 0.79
NXF1-213ENST00000532297 DCAF11Q8TEB1 546 aa19.98■□□□□ 0.79
NXF1-213ENST00000532297 ST20-MTHFSA0A0A6YYL1 179 aa19.98■□□□□ 0.79
NXF1-213ENST00000532297 IL27Q8NEV9 243 aa19.98■□□□□ 0.79
NXF1-213ENST00000532297 CARMIL2Q6F5E8 1435 aa19.98■□□□□ 0.79
NXF1-213ENST00000532297 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
NXF1-213ENST00000532297 ABCC10Q5T3U5 1492 aa19.96■□□□□ 0.79
NXF1-213ENST00000532297 RNF123Q5XPI4 1314 aa19.95■□□□□ 0.78
NXF1-213ENST00000532297 ABCA8O94911 1581 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms