RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
HMGB1P42-201ENST00000532126 ARID3CA6NKF2 412 aa9.31□□□□□ -0.92
HMGB1P42-201ENST00000532126 ZCCHC11Q5TAX3 1644 aaKnown RBP9.3□□□□□ -0.92
HMGB1P42-201ENST00000532126 DIP2BQ9P265 1576 aa9.29□□□□□ -0.92
HMGB1P42-201ENST00000532126 ARHGAP35Q9NRY4 1499 aa9.29□□□□□ -0.92
HMGB1P42-201ENST00000532126 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P42-201ENST00000532126 FMN1Q68DA7 1419 aa9.28□□□□□ -0.92
HMGB1P42-201ENST00000532126 ATP10BO94823 1461 aa9.28□□□□□ -0.92
HMGB1P42-201ENST00000532126 WDR7Q9Y4E6 1490 aa9.28□□□□□ -0.92
HMGB1P42-201ENST00000532126 RAPGEF6Q8TEU7 1601 aa9.27□□□□□ -0.92
HMGB1P42-201ENST00000532126 KCNH8Q96L42 1107 aa9.27□□□□□ -0.93
HMGB1P42-201ENST00000532126 ATP1B4Q9UN42 357 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P42-201ENST00000532126 NUP153P49790 1475 aaKnown RBP9.27□□□□□ -0.93
HMGB1P42-201ENST00000532126 KIF13AQ9H1H9 1805 aa9.26□□□□□ -0.93
HMGB1P42-201ENST00000532126 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
HMGB1P42-201ENST00000532126 CLIP1P30622 1438 aa9.26□□□□□ -0.93
HMGB1P42-201ENST00000532126 GLI2P10070 1586 aa9.24□□□□□ -0.93
HMGB1P42-201ENST00000532126 LOC105371045A0A1W2PR82 267 aa9.24□□□□□ -0.93
HMGB1P42-201ENST00000532126 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
HMGB1P42-201ENST00000532126 NBR1Q14596 966 aa9.24□□□□□ -0.93
HMGB1P42-201ENST00000532126 PAXIP1Q6ZW49 1069 aaPredicted RBP9.24□□□□□ -0.93
HMGB1P42-201ENST00000532126 PKD2Q13563 968 aa9.21□□□□□ -0.94
HMGB1P42-201ENST00000532126 CFAP44Q96MT7 982 aa9.21□□□□□ -0.94
HMGB1P42-201ENST00000532126 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
HMGB1P42-201ENST00000532126 CEP162Q5TB80 1403 aa9.21□□□□□ -0.94
HMGB1P42-201ENST00000532126 CD109Q6YHK3 1445 aa9.21□□□□□ -0.94
HMGB1P42-201ENST00000532126 HECW1Q76N89 1606 aa9.2□□□□□ -0.94
HMGB1P42-201ENST00000532126 CASKIN1Q8WXD9 1431 aa9.2□□□□□ -0.94
HMGB1P42-201ENST00000532126 CDK13Q14004 1512 aaKnown RBP9.2□□□□□ -0.94
HMGB1P42-201ENST00000532126 POLA2Q14181 598 aa9.19□□□□□ -0.94
HMGB1P42-201ENST00000532126 TEX14Q8IWB6 1497 aa9.19□□□□□ -0.94
HMGB1P42-201ENST00000532126 MAP3K4Q9Y6R4 1608 aa9.19□□□□□ -0.94
HMGB1P42-201ENST00000532126 TSPOAP1O95153 1857 aa9.18□□□□□ -0.94
HMGB1P42-201ENST00000532126 MAGI3Q5TCQ9 1506 aa9.17□□□□□ -0.94
HMGB1P42-201ENST00000532126 CACNB1Q02641 598 aaPredicted RBP9.17□□□□□ -0.94
HMGB1P42-201ENST00000532126 PCF11O94913 1555 aaKnown RBP9.16□□□□□ -0.94
HMGB1P42-201ENST00000532126 FYCO1Q9BQS8 1478 aa9.16□□□□□ -0.94
HMGB1P42-201ENST00000532126 TMEM132AQ24JP5 1023 aa9.16□□□□□ -0.94
HMGB1P42-201ENST00000532126 CFAP43Q8NDM7 1665 aa9.16□□□□□ -0.94
HMGB1P42-201ENST00000532126 KDM6BO15054 1643 aa9.16□□□□□ -0.94
HMGB1P42-201ENST00000532126 CCDC18Q5T9S5 1454 aa9.15□□□□□ -0.94
HMGB1P42-201ENST00000532126 SPRYD3Q8NCJ5 442 aa9.15□□□□□ -0.94
HMGB1P42-201ENST00000532126 SPINK5Q9NQ38 1064 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P42-201ENST00000532126 PPRC1Q5VV67 1664 aaKnown RBP9.15□□□□□ -0.94
HMGB1P42-201ENST00000532126 ABCA9Q8IUA7 1624 aa9.15□□□□□ -0.94
HMGB1P42-201ENST00000532126 RNF39Q9H2S5 420 aa9.14□□□□□ -0.95
HMGB1P42-201ENST00000532126 TROQ12816 1431 aaPredicted RBP9.14□□□□□ -0.95
HMGB1P42-201ENST00000532126 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
HMGB1P42-201ENST00000532126 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
HMGB1P42-201ENST00000532126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.12□□□□□ -0.95
HMGB1P42-201ENST00000532126 CAPN15O75808 1086 aa9.12□□□□□ -0.95
HMGB1P42-201ENST00000532126 COL17A1Q9UMD9 1497 aaPredicted RBP9.12□□□□□ -0.95
HMGB1P42-201ENST00000532126 KLHL34Q8N239 644 aa9.11□□□□□ -0.95
HMGB1P42-201ENST00000532126 NEO1Q92859 1461 aa9.1□□□□□ -0.95
HMGB1P42-201ENST00000532126 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
HMGB1P42-201ENST00000532126 VPS8Q8N3P4 1428 aa9.1□□□□□ -0.95
HMGB1P42-201ENST00000532126 TTC37Q6PGP7 1564 aa9.1□□□□□ -0.95
HMGB1P42-201ENST00000532126 KIF14Q15058 1648 aa9.09□□□□□ -0.95
HMGB1P42-201ENST00000532126 FANCAO15360 1455 aa9.09□□□□□ -0.95
HMGB1P42-201ENST00000532126 LRRIQ1Q96JM4 1722 aa9.09□□□□□ -0.95
HMGB1P42-201ENST00000532126 PLCH2O75038 1416 aa9.09□□□□□ -0.95
HMGB1P42-201ENST00000532126 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
HMGB1P42-201ENST00000532126 ARAP3Q8WWN8 1544 aa9.09□□□□□ -0.95
HMGB1P42-201ENST00000532126 MTUS2Q5JR59 1369 aa9.09□□□□□ -0.95
HMGB1P42-201ENST00000532126 ECM2O94769 699 aaPredicted RBP9.08□□□□□ -0.96
HMGB1P42-201ENST00000532126 EFCAB2Q5VUJ9 269 aa9.08□□□□□ -0.96
HMGB1P42-201ENST00000532126 AKNAQ7Z591 1439 aa9.07□□□□□ -0.96
HMGB1P42-201ENST00000532126 RAPGEF3O95398 923 aa9.07□□□□□ -0.96
HMGB1P42-201ENST00000532126 TSHZ2Q9NRE2 1034 aa9.07□□□□□ -0.96
HMGB1P42-201ENST00000532126 ARHGAP5Q13017 1502 aa9.05□□□□□ -0.96
HMGB1P42-201ENST00000532126 CFAP74Q9C0B2 1584 aa9.05□□□□□ -0.96
HMGB1P42-201ENST00000532126 DENND4BO75064 1496 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P42-201ENST00000532126 ADGRL1O94910 1474 aa9.04□□□□□ -0.96
HMGB1P42-201ENST00000532126 CCNB3Q8WWL7 1395 aa9.04□□□□□ -0.96
HMGB1P42-201ENST00000532126 SCAPERQ9BY12 1400 aa9.04□□□□□ -0.96
HMGB1P42-201ENST00000532126 MYO5CQ9NQX4 1742 aa9.03□□□□□ -0.96
HMGB1P42-201ENST00000532126 ZNF777Q9ULD5 760 aaPredicted RBP9.03□□□□□ -0.96
HMGB1P42-201ENST00000532126 EHBP1L1Q8N3D4 1523 aa9.03□□□□□ -0.96
HMGB1P42-201ENST00000532126 GPATCH8Q9UKJ3 1502 aaKnown RBP9.02□□□□□ -0.97
HMGB1P42-201ENST00000532126 CFDP1Q9UEE9 299 aaPredicted RBP9.02□□□□□ -0.97
HMGB1P42-201ENST00000532126 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
HMGB1P42-201ENST00000532126 TIAM1Q13009 1591 aa9.02□□□□□ -0.97
HMGB1P42-201ENST00000532126 POGZQ7Z3K3 1410 aa9.01□□□□□ -0.97
HMGB1P42-201ENST00000532126 MAP3K1Q13233 1512 aa9□□□□□ -0.97
HMGB1P42-201ENST00000532126 FRMPD1Q5SYB0 1578 aa9□□□□□ -0.97
HMGB1P42-201ENST00000532126 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
HMGB1P42-201ENST00000532126 AFAP1Q8N556 730 aa9□□□□□ -0.97
HMGB1P42-201ENST00000532126 PREX2Q70Z35 1606 aa9□□□□□ -0.97
HMGB1P42-201ENST00000532126 LRRC9Q6ZRR7 1453 aa9□□□□□ -0.97
HMGB1P42-201ENST00000532126 MYT1LQ9UL68 1186 aa8.99□□□□□ -0.97
HMGB1P42-201ENST00000532126 NCOA2Q15596 1464 aa8.99□□□□□ -0.97
HMGB1P42-201ENST00000532126 ZNF518AQ6AHZ1 1483 aa8.98□□□□□ -0.97
HMGB1P42-201ENST00000532126 MAGI2Q86UL8 1455 aa8.98□□□□□ -0.97
HMGB1P42-201ENST00000532126 CDC42BPBQ9Y5S2 1711 aa8.98□□□□□ -0.97
HMGB1P42-201ENST00000532126 KDM4FA0A1W2PPD8 638 aa8.98□□□□□ -0.97
HMGB1P42-201ENST00000532126 ABCB7O75027 752 aa8.98□□□□□ -0.97
HMGB1P42-201ENST00000532126 PLCD3Q8N3E9 789 aa8.98□□□□□ -0.97
HMGB1P42-201ENST00000532126 CDC42BPAQ5VT25 1732 aa8.97□□□□□ -0.97
HMGB1P42-201ENST00000532126 RICTORQ6R327 1708 aa8.97□□□□□ -0.97
HMGB1P42-201ENST00000532126 ABCC1P33527 1531 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms