RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TIE1P35590 1138 aa12.48□□□□□ -0.41
TRIM53CP-201ENST00000531490 BMP2KQ9NSY1 1161 aaPredicted RBP12.48□□□□□ -0.41
TRIM53CP-201ENST00000531490 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
TRIM53CP-201ENST00000531490 GRIN2AQ12879 1464 aa12.46□□□□□ -0.41
TRIM53CP-201ENST00000531490 ZNF467Q7Z7K2 595 aaPredicted RBP12.46□□□□□ -0.41
TRIM53CP-201ENST00000531490 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
TRIM53CP-201ENST00000531490 PKD2Q13563 968 aa12.45□□□□□ -0.42
TRIM53CP-201ENST00000531490 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
TRIM53CP-201ENST00000531490 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
TRIM53CP-201ENST00000531490 NUP160Q12769 1436 aa12.44□□□□□ -0.42
TRIM53CP-201ENST00000531490 TTLL13PA6NNM8 815 aa12.43□□□□□ -0.42
TRIM53CP-201ENST00000531490 PBRM1Q86U86 1689 aa12.43□□□□□ -0.42
TRIM53CP-201ENST00000531490 ABCA5Q8WWZ7 1642 aa12.43□□□□□ -0.42
TRIM53CP-201ENST00000531490 FAM69CQ0P6D2 419 aa12.41□□□□□ -0.42
TRIM53CP-201ENST00000531490 TMEM106CQ9BVX2 250 aa12.41□□□□□ -0.42
TRIM53CP-201ENST00000531490 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
TRIM53CP-201ENST00000531490 WRNQ14191 1432 aaPredicted RBP eCLIP12.39□□□□□ -0.43
TRIM53CP-201ENST00000531490 PRG4Q92954 1404 aaPredicted RBP12.39□□□□□ -0.43
TRIM53CP-201ENST00000531490 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
TRIM53CP-201ENST00000531490 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
TRIM53CP-201ENST00000531490 FHAD1B1AJZ9 1412 aa12.38□□□□□ -0.43
TRIM53CP-201ENST00000531490 ADAMTS12P58397 1594 aa12.37□□□□□ -0.43
TRIM53CP-201ENST00000531490 KDM4FA0A1W2PPD8 638 aa12.37□□□□□ -0.43
TRIM53CP-201ENST00000531490 PSEN1P49768 467 aa12.36□□□□□ -0.43
TRIM53CP-201ENST00000531490 TRIM35Q9UPQ4 493 aa12.36□□□□□ -0.43
TRIM53CP-201ENST00000531490 PDAP1Q13442 181 aaKnown RBP12.35□□□□□ -0.43
TRIM53CP-201ENST00000531490 RIOK3O14730 519 aaKnown RBP12.33□□□□□ -0.44
TRIM53CP-201ENST00000531490 SLC39A7Q92504 469 aa12.33□□□□□ -0.44
TRIM53CP-201ENST00000531490 SHROOM2Q13796 1616 aa12.33□□□□□ -0.44
TRIM53CP-201ENST00000531490 ABCC10Q5T3U5 1492 aa12.32□□□□□ -0.44
TRIM53CP-201ENST00000531490 C7P10643 843 aa12.31□□□□□ -0.44
TRIM53CP-201ENST00000531490 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
TRIM53CP-201ENST00000531490 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
TRIM53CP-201ENST00000531490 RGL2O15211 777 aa12.3□□□□□ -0.44
TRIM53CP-201ENST00000531490 KIF13AQ9H1H9 1805 aa12.3□□□□□ -0.44
TRIM53CP-201ENST00000531490 ERICH3Q5RHP9 1530 aa12.26□□□□□ -0.45
TRIM53CP-201ENST00000531490 TTBK1Q5TCY1 1321 aaPredicted RBP12.26□□□□□ -0.45
TRIM53CP-201ENST00000531490 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
TRIM53CP-201ENST00000531490 IER5LQ5T953 404 aa12.25□□□□□ -0.45
TRIM53CP-201ENST00000531490 TOP2BQ02880 1626 aa12.24□□□□□ -0.45
TRIM53CP-201ENST00000531490 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
TRIM53CP-201ENST00000531490 LHX8Q68G74 356 aa12.24□□□□□ -0.45
TRIM53CP-201ENST00000531490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
TRIM53CP-201ENST00000531490 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
TRIM53CP-201ENST00000531490 DIP2BQ9P265 1576 aa12.23□□□□□ -0.45
TRIM53CP-201ENST00000531490 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
TRIM53CP-201ENST00000531490 MAPKBP1O60336 1514 aa12.22□□□□□ -0.45
TRIM53CP-201ENST00000531490 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
TRIM53CP-201ENST00000531490 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
TRIM53CP-201ENST00000531490 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
TRIM53CP-201ENST00000531490 RUSC2Q8N2Y8 1516 aa12.2□□□□□ -0.46
TRIM53CP-201ENST00000531490 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
TRIM53CP-201ENST00000531490 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
TRIM53CP-201ENST00000531490 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
TRIM53CP-201ENST00000531490 KDM6BO15054 1643 aa12.19□□□□□ -0.46
TRIM53CP-201ENST00000531490 SEC24BO95487 1268 aa12.18□□□□□ -0.46
TRIM53CP-201ENST00000531490 IRX5P78411 483 aaPredicted RBP12.18□□□□□ -0.46
TRIM53CP-201ENST00000531490 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
TRIM53CP-201ENST00000531490 IGF1RP08069 1367 aa12.17□□□□□ -0.46
TRIM53CP-201ENST00000531490 PTPRGP23470 1445 aa12.15□□□□□ -0.46
TRIM53CP-201ENST00000531490 KIAA0586Q9BVV6 1533 aa12.15□□□□□ -0.46
TRIM53CP-201ENST00000531490 POTEJP0CG39 1038 aa12.13□□□□□ -0.47
TRIM53CP-201ENST00000531490 PLCG2P16885 1265 aa12.13□□□□□ -0.47
TRIM53CP-201ENST00000531490 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
TRIM53CP-201ENST00000531490 BCL11BQ9C0K0 894 aaPredicted RBP12.13□□□□□ -0.47
TRIM53CP-201ENST00000531490 OCEL1Q9H607 264 aa12.13□□□□□ -0.47
TRIM53CP-201ENST00000531490 STK25O00506 426 aa12.12□□□□□ -0.47
TRIM53CP-201ENST00000531490 COL17A1Q9UMD9 1497 aaPredicted RBP12.12□□□□□ -0.47
TRIM53CP-201ENST00000531490 TSPOAP1O95153 1857 aa12.12□□□□□ -0.47
TRIM53CP-201ENST00000531490 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
TRIM53CP-201ENST00000531490 ADGRL1O94910 1474 aa12.11□□□□□ -0.47
TRIM53CP-201ENST00000531490 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
TRIM53CP-201ENST00000531490 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
TRIM53CP-201ENST00000531490 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
TRIM53CP-201ENST00000531490 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM53CP-201ENST00000531490 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
TRIM53CP-201ENST00000531490 TNIKQ9UKE5 1360 aa12.07□□□□□ -0.48
TRIM53CP-201ENST00000531490 KIF27Q86VH2 1401 aa12.07□□□□□ -0.48
TRIM53CP-201ENST00000531490 ABCC2Q92887 1545 aa12.07□□□□□ -0.48
TRIM53CP-201ENST00000531490 CARMIL1Q5VZK9 1371 aa12.05□□□□□ -0.48
TRIM53CP-201ENST00000531490 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
TRIM53CP-201ENST00000531490 PLB1Q6P1J6 1458 aa12.05□□□□□ -0.48
TRIM53CP-201ENST00000531490 CARMIL2Q6F5E8 1435 aa12.03□□□□□ -0.48
TRIM53CP-201ENST00000531490 SOX12O15370 315 aa12.03□□□□□ -0.48
TRIM53CP-201ENST00000531490 UACAQ9BZF9 1416 aa12.02□□□□□ -0.48
TRIM53CP-201ENST00000531490 PPRC1Q5VV67 1664 aaKnown RBP12.02□□□□□ -0.49
TRIM53CP-201ENST00000531490 HECW2Q9P2P5 1572 aa12.02□□□□□ -0.49
TRIM53CP-201ENST00000531490 CHGAP10645 457 aaKnown RBP12.02□□□□□ -0.49
TRIM53CP-201ENST00000531490 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
TRIM53CP-201ENST00000531490 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.49
TRIM53CP-201ENST00000531490 GLI2P10070 1586 aa12.01□□□□□ -0.49
TRIM53CP-201ENST00000531490 DPY19L2Q6NUT2 758 aa12.01□□□□□ -0.49
TRIM53CP-201ENST00000531490 MAMSTRQ6ZN01 415 aa12□□□□□ -0.49
TRIM53CP-201ENST00000531490 PHF8Q9UPP1 1060 aa12□□□□□ -0.49
TRIM53CP-201ENST00000531490 UHRF1BP1LA0JNW5 1464 aa11.99□□□□□ -0.49
TRIM53CP-201ENST00000531490 DISP1Q96F81 1524 aa11.99□□□□□ -0.49
TRIM53CP-201ENST00000531490 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
TRIM53CP-201ENST00000531490 CUL7Q14999 1698 aa11.96□□□□□ -0.49
TRIM53CP-201ENST00000531490 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.49
TRIM53CP-201ENST00000531490 MFRPQ9BY79 579 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms