RNA–Protein interactions for RNA: ENST00000531339.5

SIPA1-207, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 5

Gene SIPA1, Length 799 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-207ENST00000531339 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
SIPA1-207ENST00000531339 RRBP1Q9P2E9 1410 aaKnown RBP27.85■■■□□ 2.05
SIPA1-207ENST00000531339 KCNH8Q96L42 1107 aa27.85■■■□□ 2.05
SIPA1-207ENST00000531339 ADAMTSL3P82987 1691 aa27.83■■■□□ 2.05
SIPA1-207ENST00000531339 FGD6Q6ZV73 1430 aa27.8■■■□□ 2.04
SIPA1-207ENST00000531339 CD109Q6YHK3 1445 aa27.79■■■□□ 2.04
SIPA1-207ENST00000531339 PCGF6Q9BYE7 350 aa27.79■■■□□ 2.04
SIPA1-207ENST00000531339 SOCS7O14512 581 aa27.78■■■□□ 2.04
SIPA1-207ENST00000531339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.77■■■□□ 2.04
SIPA1-207ENST00000531339 MIA2Q96PC5 1412 aa27.77■■■□□ 2.04
SIPA1-207ENST00000531339 ITSN2Q9NZM3 1697 aa27.77■■■□□ 2.04
SIPA1-207ENST00000531339 GPATCH8Q9UKJ3 1502 aaKnown RBP27.77■■■□□ 2.04
SIPA1-207ENST00000531339 TTC37Q6PGP7 1564 aa27.73■■■□□ 2.03
SIPA1-207ENST00000531339 CFDP1Q9UEE9 299 aaPredicted RBP27.72■■■□□ 2.03
SIPA1-207ENST00000531339 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
SIPA1-207ENST00000531339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.72■■■□□ 2.03
SIPA1-207ENST00000531339 FAM50AQ14320 339 aaKnown RBP27.7■■■□□ 2.02
SIPA1-207ENST00000531339 PTPN23Q9H3S7 1636 aa27.7■■■□□ 2.02
SIPA1-207ENST00000531339 ABCA9Q8IUA7 1624 aa27.69■■■□□ 2.02
SIPA1-207ENST00000531339 DISP3Q9P2K9 1392 aa27.69■■■□□ 2.02
SIPA1-207ENST00000531339 TCOF1Q13428 1488 aaKnown RBP27.68■■■□□ 2.02
SIPA1-207ENST00000531339 PREX2Q70Z35 1606 aa27.67■■■□□ 2.02
SIPA1-207ENST00000531339 MYO5CQ9NQX4 1742 aa27.67■■■□□ 2.02
SIPA1-207ENST00000531339 MADDQ8WXG6 1647 aa27.66■■■□□ 2.02
SIPA1-207ENST00000531339 ARAP3Q8WWN8 1544 aa27.66■■■□□ 2.02
SIPA1-207ENST00000531339 PLCH2O75038 1416 aa27.64■■■□□ 2.02
SIPA1-207ENST00000531339 BCORL1Q5H9F3 1711 aa27.64■■■□□ 2.01
SIPA1-207ENST00000531339 CDC42BPBQ9Y5S2 1711 aa27.62■■■□□ 2.01
SIPA1-207ENST00000531339 CERKQ8TCT0 537 aa27.62■■■□□ 2.01
SIPA1-207ENST00000531339 ARHGAP5Q13017 1502 aa27.61■■■□□ 2.01
SIPA1-207ENST00000531339 HSPA2P54652 639 aa27.6■■■□□ 2.01
SIPA1-207ENST00000531339 ZNF777Q9ULD5 760 aaPredicted RBP27.59■■■□□ 2.01
SIPA1-207ENST00000531339 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2.01
SIPA1-207ENST00000531339 CAMSAP2Q08AD1 1489 aa27.57■■■□□ 2
SIPA1-207ENST00000531339 ZNF644Q9H582 1327 aaPredicted RBP27.57■■■□□ 2
SIPA1-207ENST00000531339 ITGAEP38570 1179 aa27.53■■■□□ 2
SIPA1-207ENST00000531339 RIMS1Q86UR5 1692 aaKnown RBP27.52■■■□□ 2
SIPA1-207ENST00000531339 PLEKHH2Q8IVE3 1493 aa27.51■■■□□ 2
SIPA1-207ENST00000531339 SAMD9LQ8IVG5 1584 aa27.51■■□□□ 1.99
SIPA1-207ENST00000531339 RAPGEF3O95398 923 aa27.5■■□□□ 1.99
SIPA1-207ENST00000531339 FANCAO15360 1455 aa27.47■■□□□ 1.99
SIPA1-207ENST00000531339 DNMT1P26358 1616 aaKnown RBP27.46■■□□□ 1.99
SIPA1-207ENST00000531339 KIAA1107Q9UPP5 1409 aa27.46■■□□□ 1.99
SIPA1-207ENST00000531339 FRMPD1Q5SYB0 1578 aa27.45■■□□□ 1.99
SIPA1-207ENST00000531339 ARID4BQ4LE39 1312 aaPredicted RBP27.44■■□□□ 1.98
SIPA1-207ENST00000531339 DAPK1P53355 1430 aa27.44■■□□□ 1.98
SIPA1-207ENST00000531339 CFAP74Q9C0B2 1584 aa27.43■■□□□ 1.98
SIPA1-207ENST00000531339 ABCC5O15440 1437 aa27.43■■□□□ 1.98
SIPA1-207ENST00000531339 RSPH4AQ5TD94 716 aa27.43■■□□□ 1.98
SIPA1-207ENST00000531339 ARHGEF5Q12774 1597 aa27.43■■□□□ 1.98
SIPA1-207ENST00000531339 HNRNPMP52272 730 aaKnown RBP eCLIP27.42■■□□□ 1.98
SIPA1-207ENST00000531339 SPATA31D1Q6ZQQ2 1576 aa27.42■■□□□ 1.98
SIPA1-207ENST00000531339 ABCC1P33527 1531 aa27.41■■□□□ 1.98
SIPA1-207ENST00000531339 PTPRKQ15262 1439 aa27.41■■□□□ 1.98
SIPA1-207ENST00000531339 MBD5Q9P267 1494 aa27.4■■□□□ 1.98
SIPA1-207ENST00000531339 SYCP2Q9BX26 1530 aa27.4■■□□□ 1.98
SIPA1-207ENST00000531339 PLPPR3Q6T4P5 718 aa27.39■■□□□ 1.98
SIPA1-207ENST00000531339 AKNAQ7Z591 1439 aa27.39■■□□□ 1.97
SIPA1-207ENST00000531339 NEO1Q92859 1461 aa27.38■■□□□ 1.97
SIPA1-207ENST00000531339 CCDC141Q6ZP82 1450 aa27.37■■□□□ 1.97
SIPA1-207ENST00000531339 CROCC2H7BZ55 1655 aa27.35■■□□□ 1.97
SIPA1-207ENST00000531339 ARHGEF12Q9NZN5 1544 aa27.35■■□□□ 1.97
SIPA1-207ENST00000531339 TSPY4P0CV99 314 aa27.34■■□□□ 1.97
SIPA1-207ENST00000531339 TSPY10P0CW01 314 aa27.34■■□□□ 1.97
SIPA1-207ENST00000531339 SHANK2Q9UPX8 1470 aa27.33■■□□□ 1.97
SIPA1-207ENST00000531339 CHIC2Q9UKJ5 165 aa27.33■■□□□ 1.97
SIPA1-207ENST00000531339 SCAPERQ9BY12 1400 aa27.32■■□□□ 1.96
SIPA1-207ENST00000531339 ROCK1Q13464 1354 aa27.31■■□□□ 1.96
SIPA1-207ENST00000531339 SIGLEC1Q9BZZ2 1709 aa27.3■■□□□ 1.96
SIPA1-207ENST00000531339 ARHGEF40Q8TER5 1519 aa27.3■■□□□ 1.96
SIPA1-207ENST00000531339 C9orf84Q5VXU9 1444 aa27.28■■□□□ 1.96
SIPA1-207ENST00000531339 TRAPPC8Q9Y2L5 1435 aa27.28■■□□□ 1.96
SIPA1-207ENST00000531339 ADGBQ8N7X0 1667 aa27.27■■□□□ 1.96
SIPA1-207ENST00000531339 ADGRL2O95490 1459 aa27.26■■□□□ 1.95
SIPA1-207ENST00000531339 HFM1A2PYH4 1435 aa27.26■■□□□ 1.95
SIPA1-207ENST00000531339 SETD5Q9C0A6 1442 aa27.26■■□□□ 1.95
SIPA1-207ENST00000531339 MAST1Q9Y2H9 1570 aa27.26■■□□□ 1.95
SIPA1-207ENST00000531339 ANKRD30AQ9BXX3 1397 aa27.25■■□□□ 1.95
SIPA1-207ENST00000531339 RRP7BPQ9NSQ0 103 aa27.24■■□□□ 1.95
SIPA1-207ENST00000531339 NCOA1Q15788 1441 aa27.22■■□□□ 1.95
SIPA1-207ENST00000531339 DENND4BO75064 1496 aaPredicted RBP27.21■■□□□ 1.95
SIPA1-207ENST00000531339 AFAP1Q8N556 730 aa27.21■■□□□ 1.95
SIPA1-207ENST00000531339 NAIPQ13075 1403 aa27.21■■□□□ 1.95
SIPA1-207ENST00000531339 RICTORQ6R327 1708 aa27.21■■□□□ 1.95
SIPA1-207ENST00000531339 ZNF518AQ6AHZ1 1483 aa27.2■■□□□ 1.95
SIPA1-207ENST00000531339 POGZQ7Z3K3 1410 aa27.2■■□□□ 1.94
SIPA1-207ENST00000531339 STRCQ7RTU9 1775 aa27.2■■□□□ 1.94
SIPA1-207ENST00000531339 SPAG9O60271 1321 aaKnown RBP27.19■■□□□ 1.94
SIPA1-207ENST00000531339 GCC2Q8IWJ2 1684 aa27.18■■□□□ 1.94
SIPA1-207ENST00000531339 RTEL1-TNFRSF6BF6WH68 1400 aa27.18■■□□□ 1.94
SIPA1-207ENST00000531339 HRCP23327 699 aa27.17■■□□□ 1.94
SIPA1-207ENST00000531339 RAB3GAP2Q9H2M9 1393 aa27.17■■□□□ 1.94
SIPA1-207ENST00000531339 FER1L4A9Z1Z3 1794 aa27.15■■□□□ 1.94
SIPA1-207ENST00000531339 PLXNC1O60486 1568 aa27.14■■□□□ 1.93
SIPA1-207ENST00000531339 KDM5CP41229 1560 aa27.13■■□□□ 1.93
SIPA1-207ENST00000531339 KIF15Q9NS87 1388 aa27.12■■□□□ 1.93
SIPA1-207ENST00000531339 PREX1Q8TCU6 1659 aa27.11■■□□□ 1.93
SIPA1-207ENST00000531339 ZFYVE16Q7Z3T8 1539 aa27.11■■□□□ 1.93
SIPA1-207ENST00000531339 INO80Q9ULG1 1556 aaPredicted RBP27.11■■□□□ 1.93
SIPA1-207ENST00000531339 ATP7AQ04656 1500 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms