RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 ARID3CA6NKF2 412 aa24.61■■□□□ 1.53
RPL38-205ENST00000530646 IQGAP2Q13576 1575 aa24.6■■□□□ 1.53
RPL38-205ENST00000530646 MRS2Q9HD23 443 aa24.6■■□□□ 1.53
RPL38-205ENST00000530646 CASKIN1Q8WXD9 1431 aa24.6■■□□□ 1.53
RPL38-205ENST00000530646 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
RPL38-205ENST00000530646 AKNAQ7Z591 1439 aa24.58■■□□□ 1.52
RPL38-205ENST00000530646 FMN1Q68DA7 1419 aa24.57■■□□□ 1.52
RPL38-205ENST00000530646 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
RPL38-205ENST00000530646 PTPN23Q9H3S7 1636 aa24.55■■□□□ 1.52
RPL38-205ENST00000530646 HFM1A2PYH4 1435 aa24.55■■□□□ 1.52
RPL38-205ENST00000530646 SMG6Q86US8 1419 aaKnown RBP24.54■■□□□ 1.52
RPL38-205ENST00000530646 PTPRKQ15262 1439 aa24.53■■□□□ 1.52
RPL38-205ENST00000530646 RNF123Q5XPI4 1314 aa24.52■■□□□ 1.52
RPL38-205ENST00000530646 LRRIQ1Q96JM4 1722 aa24.52■■□□□ 1.52
RPL38-205ENST00000530646 C11orf95C9JLR9 678 aaPredicted RBP24.52■■□□□ 1.52
RPL38-205ENST00000530646 EIF4G2P78344 907 aaKnown RBP eCLIP24.52■■□□□ 1.52
RPL38-205ENST00000530646 FGD6Q6ZV73 1430 aa24.51■■□□□ 1.51
RPL38-205ENST00000530646 MAGI1Q96QZ7 1491 aaPredicted RBP24.5■■□□□ 1.51
RPL38-205ENST00000530646 SYNJ2O15056 1496 aa24.49■■□□□ 1.51
RPL38-205ENST00000530646 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
RPL38-205ENST00000530646 CCDC7Q96M83 1385 aa24.48■■□□□ 1.51
RPL38-205ENST00000530646 CEP170Q5SW79 1584 aa24.48■■□□□ 1.51
RPL38-205ENST00000530646 NCOA1Q15788 1441 aa24.47■■□□□ 1.51
RPL38-205ENST00000530646 NAIPQ13075 1403 aa24.46■■□□□ 1.51
RPL38-205ENST00000530646 WASHC2CQ9Y4E1 1318 aa24.44■■□□□ 1.5
RPL38-205ENST00000530646 NUDCQ9Y266 331 aa24.44■■□□□ 1.5
RPL38-205ENST00000530646 NEFMP07197 916 aa24.43■■□□□ 1.5
RPL38-205ENST00000530646 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
RPL38-205ENST00000530646 USP35Q9P2H5 1018 aa24.43■■□□□ 1.5
RPL38-205ENST00000530646 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
RPL38-205ENST00000530646 MTUS2Q5JR59 1369 aa24.41■■□□□ 1.5
RPL38-205ENST00000530646 LAS1LQ9Y4W2 734 aaKnown RBP24.41■■□□□ 1.5
RPL38-205ENST00000530646 NPM2Q86SE8 214 aaKnown RBP24.38■■□□□ 1.49
RPL38-205ENST00000530646 CDK13Q14004 1512 aaKnown RBP24.36■■□□□ 1.49
RPL38-205ENST00000530646 DENND4BO75064 1496 aaPredicted RBP24.36■■□□□ 1.49
RPL38-205ENST00000530646 KIAA0556O60303 1618 aa24.36■■□□□ 1.49
RPL38-205ENST00000530646 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
RPL38-205ENST00000530646 MAGI3Q5TCQ9 1506 aa24.36■■□□□ 1.49
RPL38-205ENST00000530646 BRPF3Q9ULD4 1205 aa24.33■■□□□ 1.49
RPL38-205ENST00000530646 NUP160Q12769 1436 aa24.32■■□□□ 1.48
RPL38-205ENST00000530646 KIF7Q2M1P5 1343 aa24.3■■□□□ 1.48
RPL38-205ENST00000530646 EPRSP07814 1512 aaKnown RBP24.3■■□□□ 1.48
RPL38-205ENST00000530646 L3MBTL2Q969R5 705 aa24.28■■□□□ 1.48
RPL38-205ENST00000530646 EIF5BO60841 1220 aaKnown RBP24.28■■□□□ 1.48
RPL38-205ENST00000530646 PPM1GO15355 546 aaPredicted RBP24.27■■□□□ 1.48
RPL38-205ENST00000530646 PDE4AP27815 886 aa24.27■■□□□ 1.48
RPL38-205ENST00000530646 HECW1Q76N89 1606 aa24.27■■□□□ 1.48
RPL38-205ENST00000530646 TCERG1O14776 1098 aaKnown RBP24.26■■□□□ 1.47
RPL38-205ENST00000530646 POLR1AO95602 1720 aaPredicted RBP24.26■■□□□ 1.47
RPL38-205ENST00000530646 PLB1Q6P1J6 1458 aa24.25■■□□□ 1.47
RPL38-205ENST00000530646 BACH2Q9BYV9 841 aa24.23■■□□□ 1.47
RPL38-205ENST00000530646 SPATA31E1Q6ZUB1 1445 aa24.22■■□□□ 1.47
RPL38-205ENST00000530646 MYOM3Q5VTT5 1437 aa24.21■■□□□ 1.47
RPL38-205ENST00000530646 SENP3-EIF4A1A0A087X0R7 540 aa24.21■■□□□ 1.47
RPL38-205ENST00000530646 NUP153P49790 1475 aaKnown RBP24.21■■□□□ 1.47
RPL38-205ENST00000530646 CHD1O14646 1710 aa24.21■■□□□ 1.47
RPL38-205ENST00000530646 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
RPL38-205ENST00000530646 DHX29Q7Z478 1369 aaKnown RBP24.2■■□□□ 1.46
RPL38-205ENST00000530646 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.46
RPL38-205ENST00000530646 GSE1Q14687 1217 aa24.19■■□□□ 1.46
RPL38-205ENST00000530646 EHBP1L1Q8N3D4 1523 aa24.18■■□□□ 1.46
RPL38-205ENST00000530646 GCC2Q8IWJ2 1684 aa24.17■■□□□ 1.46
RPL38-205ENST00000530646 EXOC6Q8TAG9 804 aa24.17■■□□□ 1.46
RPL38-205ENST00000530646 PKNOX2Q96KN3 472 aa24.17■■□□□ 1.46
RPL38-205ENST00000530646 KDM6BO15054 1643 aa24.16■■□□□ 1.46
RPL38-205ENST00000530646 SUPT6HQ7KZ85 1726 aaKnown RBP24.16■■□□□ 1.46
RPL38-205ENST00000530646 RAPGEF6Q8TEU7 1601 aa24.16■■□□□ 1.46
RPL38-205ENST00000530646 MS4A1P11836 297 aa24.15■■□□□ 1.46
RPL38-205ENST00000530646 CARMIL2Q6F5E8 1435 aa24.15■■□□□ 1.46
RPL38-205ENST00000530646 CNGB1Q14028 1251 aaPredicted RBP24.15■■□□□ 1.46
RPL38-205ENST00000530646 MPHOSPH9Q99550 1183 aa24.13■■□□□ 1.45
RPL38-205ENST00000530646 RRP1P56182 461 aaKnown RBP24.13■■□□□ 1.45
RPL38-205ENST00000530646 PRG4Q92954 1404 aaPredicted RBP24.13■■□□□ 1.45
RPL38-205ENST00000530646 FOXD1Q16676 465 aa24.12■■□□□ 1.45
RPL38-205ENST00000530646 PNISRQ8TF01 805 aaKnown RBP24.12■■□□□ 1.45
RPL38-205ENST00000530646 CHIC2Q9UKJ5 165 aa24.11■■□□□ 1.45
RPL38-205ENST00000530646 TEX14Q8IWB6 1497 aa24.09■■□□□ 1.45
RPL38-205ENST00000530646 NFKBIBQ15653 356 aa24.08■■□□□ 1.45
RPL38-205ENST00000530646 ARHGEF11O15085 1522 aa24.08■■□□□ 1.45
RPL38-205ENST00000530646 FRAT1Q92837 279 aaPredicted RBP24.08■■□□□ 1.45
RPL38-205ENST00000530646 RPRD2Q5VT52 1461 aaKnown RBP24.06■■□□□ 1.44
RPL38-205ENST00000530646 DDRGK1Q96HY6 314 aa24.05■■□□□ 1.44
RPL38-205ENST00000530646 ERCC6L2Q5T890 1561 aa24.04■■□□□ 1.44
RPL38-205ENST00000530646 ZNF644Q9H582 1327 aaPredicted RBP24.04■■□□□ 1.44
RPL38-205ENST00000530646 ANKRD30BQ9BXX2 1392 aa24.03■■□□□ 1.44
RPL38-205ENST00000530646 BCORL1Q5H9F3 1711 aa24.01■■□□□ 1.43
RPL38-205ENST00000530646 TCOF1Q13428 1488 aaKnown RBP24.01■■□□□ 1.43
RPL38-205ENST00000530646 RSPH6AQ9H0K4 717 aa24.01■■□□□ 1.43
RPL38-205ENST00000530646 MIA2Q96PC5 1412 aa24.01■■□□□ 1.43
RPL38-205ENST00000530646 TMC1Q8TDI8 760 aa24■■□□□ 1.43
RPL38-205ENST00000530646 RCAN3Q9UKA8 241 aa24■■□□□ 1.43
RPL38-205ENST00000530646 LRPPRCP42704 1394 aaKnown RBP23.99■■□□□ 1.43
RPL38-205ENST00000530646 PTPRGP23470 1445 aa23.99■■□□□ 1.43
RPL38-205ENST00000530646 SKAP1Q86WV1 359 aa23.96■■□□□ 1.43
RPL38-205ENST00000530646 POLR3GLQ9BT43 218 aa23.96■■□□□ 1.43
RPL38-205ENST00000530646 SLC4A3P48751 1232 aa23.96■■□□□ 1.43
RPL38-205ENST00000530646 ABCA8O94911 1581 aa23.95■■□□□ 1.42
RPL38-205ENST00000530646 ATP10BO94823 1461 aa23.94■■□□□ 1.42
RPL38-205ENST00000530646 KIF14Q15058 1648 aa23.94■■□□□ 1.42
RPL38-205ENST00000530646 TROQ12816 1431 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms