RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 ZMYM4Q5VZL5 1548 aa24.8■■□□□ 1.56
CTSB-219ENST00000530640 CASKIN1Q8WXD9 1431 aa24.79■■□□□ 1.56
CTSB-219ENST00000530640 KIF14Q15058 1648 aa24.77■■□□□ 1.56
CTSB-219ENST00000530640 CCDC18Q5T9S5 1454 aa24.77■■□□□ 1.56
CTSB-219ENST00000530640 MADDQ8WXG6 1647 aa24.76■■□□□ 1.55
CTSB-219ENST00000530640 FYCO1Q9BQS8 1478 aa24.75■■□□□ 1.55
CTSB-219ENST00000530640 TROQ12816 1431 aaPredicted RBP24.75■■□□□ 1.55
CTSB-219ENST00000530640 EFCAB2Q5VUJ9 269 aa24.75■■□□□ 1.55
CTSB-219ENST00000530640 ZFYVE16Q7Z3T8 1539 aa24.74■■□□□ 1.55
CTSB-219ENST00000530640 MYO5CQ9NQX4 1742 aa24.74■■□□□ 1.55
CTSB-219ENST00000530640 SCAPERQ9BY12 1400 aa24.73■■□□□ 1.55
CTSB-219ENST00000530640 FBXO41Q8TF61 875 aa24.72■■□□□ 1.55
CTSB-219ENST00000530640 VPS8Q8N3P4 1428 aa24.71■■□□□ 1.55
CTSB-219ENST00000530640 LMTK3Q96Q04 1460 aa24.67■■□□□ 1.54
CTSB-219ENST00000530640 YEATS2Q9ULM3 1422 aa24.67■■□□□ 1.54
CTSB-219ENST00000530640 ATP10AO60312 1499 aa24.66■■□□□ 1.54
CTSB-219ENST00000530640 RIMS1Q86UR5 1692 aaKnown RBP24.65■■□□□ 1.54
CTSB-219ENST00000530640 C9orf84Q5VXU9 1444 aa24.62■■□□□ 1.53
CTSB-219ENST00000530640 ARHGAP5Q13017 1502 aa24.61■■□□□ 1.53
CTSB-219ENST00000530640 ZNF518AQ6AHZ1 1483 aa24.61■■□□□ 1.53
CTSB-219ENST00000530640 PREX2Q70Z35 1606 aa24.58■■□□□ 1.52
CTSB-219ENST00000530640 MLECQ14165 292 aa24.56■■□□□ 1.52
CTSB-219ENST00000530640 CDC42BPBQ9Y5S2 1711 aa24.56■■□□□ 1.52
CTSB-219ENST00000530640 ARHGEF12Q9NZN5 1544 aa24.54■■□□□ 1.52
CTSB-219ENST00000530640 FER1L4A9Z1Z3 1794 aa24.52■■□□□ 1.52
CTSB-219ENST00000530640 AFAP1Q8N556 730 aa24.52■■□□□ 1.52
CTSB-219ENST00000530640 KDM5CP41229 1560 aa24.52■■□□□ 1.52
CTSB-219ENST00000530640 CDC42BPAQ5VT25 1732 aa24.51■■□□□ 1.51
CTSB-219ENST00000530640 SIGLEC1Q9BZZ2 1709 aa24.51■■□□□ 1.51
CTSB-219ENST00000530640 HSPA2P54652 639 aa24.5■■□□□ 1.51
CTSB-219ENST00000530640 PLPPR3Q6T4P5 718 aa24.5■■□□□ 1.51
CTSB-219ENST00000530640 MYT1LQ9UL68 1186 aa24.48■■□□□ 1.51
CTSB-219ENST00000530640 MLH3Q9UHC1 1453 aa24.48■■□□□ 1.51
CTSB-219ENST00000530640 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
CTSB-219ENST00000530640 MTUS2Q5JR59 1369 aa24.46■■□□□ 1.51
CTSB-219ENST00000530640 ABCC1P33527 1531 aa24.46■■□□□ 1.51
CTSB-219ENST00000530640 DMRT2Q9Y5R5 561 aa24.45■■□□□ 1.5
CTSB-219ENST00000530640 MAP3K1Q13233 1512 aa24.44■■□□□ 1.5
CTSB-219ENST00000530640 EHBP1L1Q8N3D4 1523 aa24.44■■□□□ 1.5
CTSB-219ENST00000530640 ITSN2Q9NZM3 1697 aa24.44■■□□□ 1.5
CTSB-219ENST00000530640 SETD1BQ9UPS6 1966 aaKnown RBP24.44■■□□□ 1.5
CTSB-219ENST00000530640 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
CTSB-219ENST00000530640 AGLP35573 1532 aa24.4■■□□□ 1.5
CTSB-219ENST00000530640 GPATCH8Q9UKJ3 1502 aaKnown RBP24.4■■□□□ 1.5
CTSB-219ENST00000530640 ESF1Q9H501 851 aaKnown RBP24.4■■□□□ 1.5
CTSB-219ENST00000530640 PREX1Q8TCU6 1659 aa24.39■■□□□ 1.5
CTSB-219ENST00000530640 SAMD9LQ8IVG5 1584 aa24.38■■□□□ 1.49
CTSB-219ENST00000530640 DIP2CQ9Y2E4 1556 aa24.38■■□□□ 1.49
CTSB-219ENST00000530640 CERKQ8TCT0 537 aa24.38■■□□□ 1.49
CTSB-219ENST00000530640 CEBPAP49715 358 aaPredicted RBP24.37■■□□□ 1.49
CTSB-219ENST00000530640 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
CTSB-219ENST00000530640 UHRF1BP1Q6BDS2 1440 aa24.37■■□□□ 1.49
CTSB-219ENST00000530640 TRAPPC8Q9Y2L5 1435 aa24.35■■□□□ 1.49
CTSB-219ENST00000530640 SYCP2Q9BX26 1530 aa24.34■■□□□ 1.49
CTSB-219ENST00000530640 ZNF777Q9ULD5 760 aaPredicted RBP24.34■■□□□ 1.49
CTSB-219ENST00000530640 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
CTSB-219ENST00000530640 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
CTSB-219ENST00000530640 CFDP1Q9UEE9 299 aaPredicted RBP24.3■■□□□ 1.48
CTSB-219ENST00000530640 SUPT6HQ7KZ85 1726 aaKnown RBP24.3■■□□□ 1.48
CTSB-219ENST00000530640 PLEKHH2Q8IVE3 1493 aa24.29■■□□□ 1.48
CTSB-219ENST00000530640 KIAA1107Q9UPP5 1409 aa24.28■■□□□ 1.48
CTSB-219ENST00000530640 KIDINS220Q9ULH0 1771 aa24.27■■□□□ 1.48
CTSB-219ENST00000530640 LRRC9Q6ZRR7 1453 aa24.26■■□□□ 1.47
CTSB-219ENST00000530640 SPAG9O60271 1321 aaKnown RBP24.24■■□□□ 1.47
CTSB-219ENST00000530640 NCOA2Q15596 1464 aa24.24■■□□□ 1.47
CTSB-219ENST00000530640 PTPRTO14522 1441 aa24.23■■□□□ 1.47
CTSB-219ENST00000530640 APLP2Q06481 763 aa24.22■■□□□ 1.47
CTSB-219ENST00000530640 HNRNPMP52272 730 aaKnown RBP eCLIP24.21■■□□□ 1.47
CTSB-219ENST00000530640 PPP6R1Q9UPN7 881 aa24.21■■□□□ 1.47
CTSB-219ENST00000530640 C3P01024 1663 aa24.21■■□□□ 1.47
CTSB-219ENST00000530640 NPATQ14207 1427 aa24.2■■□□□ 1.46
CTSB-219ENST00000530640 ATP7AQ04656 1500 aa24.2■■□□□ 1.46
CTSB-219ENST00000530640 INO80Q9ULG1 1556 aaPredicted RBP24.19■■□□□ 1.46
CTSB-219ENST00000530640 STRCQ7RTU9 1775 aa24.19■■□□□ 1.46
CTSB-219ENST00000530640 KANK4Q5T7N3 995 aaPredicted RBP24.16■■□□□ 1.46
CTSB-219ENST00000530640 ZMYM3Q14202 1370 aa24.16■■□□□ 1.46
CTSB-219ENST00000530640 MROH2AA6NES4 1674 aa24.15■■□□□ 1.46
CTSB-219ENST00000530640 ZNF644Q9H582 1327 aaPredicted RBP24.15■■□□□ 1.46
CTSB-219ENST00000530640 CAMSAP2Q08AD1 1489 aa24.13■■□□□ 1.45
CTSB-219ENST00000530640 MBD5Q9P267 1494 aa24.13■■□□□ 1.45
CTSB-219ENST00000530640 A2MP01023 1474 aa24.11■■□□□ 1.45
CTSB-219ENST00000530640 NCOA1Q15788 1441 aa24.1■■□□□ 1.45
CTSB-219ENST00000530640 PLXNC1O60486 1568 aa24.09■■□□□ 1.45
CTSB-219ENST00000530640 ADGBQ8N7X0 1667 aa24.08■■□□□ 1.45
CTSB-219ENST00000530640 RSPH4AQ5TD94 716 aa24.08■■□□□ 1.45
CTSB-219ENST00000530640 CCDC141Q6ZP82 1450 aa24.08■■□□□ 1.45
CTSB-219ENST00000530640 IQSEC2Q5JU85 1478 aa24.07■■□□□ 1.44
CTSB-219ENST00000530640 RTEL1-TNFRSF6BF6WH68 1400 aa24.07■■□□□ 1.44
CTSB-219ENST00000530640 PPARGC1BQ86YN6 1023 aaKnown RBP24.05■■□□□ 1.44
CTSB-219ENST00000530640 PKD2Q13563 968 aa24.04■■□□□ 1.44
CTSB-219ENST00000530640 GGT6Q6P531 493 aa24.03■■□□□ 1.44
CTSB-219ENST00000530640 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
CTSB-219ENST00000530640 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
CTSB-219ENST00000530640 PLA2R1Q13018 1463 aa24.01■■□□□ 1.43
CTSB-219ENST00000530640 CAMSAP1Q5T5Y3 1602 aa24■■□□□ 1.43
CTSB-219ENST00000530640 PTPRKQ15262 1439 aa23.99■■□□□ 1.43
CTSB-219ENST00000530640 DHX29Q7Z478 1369 aaKnown RBP23.99■■□□□ 1.43
CTSB-219ENST00000530640 LTBP4Q8N2S1 1624 aa23.99■■□□□ 1.43
CTSB-219ENST00000530640 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
CTSB-219ENST00000530640 CLTCQ00610 1675 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms