RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 HSPA2P54652 639 aa13.68□□□□□ -0.22
CTSF-208ENST00000530565 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
CTSF-208ENST00000530565 CASKIN1Q8WXD9 1431 aa13.67□□□□□ -0.22
CTSF-208ENST00000530565 ATP1B4Q9UN42 357 aaPredicted RBP13.66□□□□□ -0.22
CTSF-208ENST00000530565 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
CTSF-208ENST00000530565 FYCO1Q9BQS8 1478 aa13.66□□□□□ -0.22
CTSF-208ENST00000530565 PLEKHD1A6NEE1 506 aa13.65□□□□□ -0.22
CTSF-208ENST00000530565 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
CTSF-208ENST00000530565 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
CTSF-208ENST00000530565 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
CTSF-208ENST00000530565 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
CTSF-208ENST00000530565 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
CTSF-208ENST00000530565 PREX1Q8TCU6 1659 aa13.61□□□□□ -0.23
CTSF-208ENST00000530565 PLCH2O75038 1416 aa13.61□□□□□ -0.23
CTSF-208ENST00000530565 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
CTSF-208ENST00000530565 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
CTSF-208ENST00000530565 CERKQ8TCT0 537 aa13.6□□□□□ -0.23
CTSF-208ENST00000530565 SCAPERQ9BY12 1400 aa13.59□□□□□ -0.23
CTSF-208ENST00000530565 STRCQ7RTU9 1775 aa13.59□□□□□ -0.23
CTSF-208ENST00000530565 MYO5CQ9NQX4 1742 aa13.59□□□□□ -0.23
CTSF-208ENST00000530565 ATP10AO60312 1499 aa13.58□□□□□ -0.24
CTSF-208ENST00000530565 C9orf84Q5VXU9 1444 aa13.57□□□□□ -0.24
CTSF-208ENST00000530565 MLECQ14165 292 aa13.57□□□□□ -0.24
CTSF-208ENST00000530565 KIF14Q15058 1648 aa13.57□□□□□ -0.24
CTSF-208ENST00000530565 CDK11AQ9UQ88 783 aaPredicted RBP13.56□□□□□ -0.24
CTSF-208ENST00000530565 KDM5CP41229 1560 aa13.55□□□□□ -0.24
CTSF-208ENST00000530565 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
CTSF-208ENST00000530565 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.25
CTSF-208ENST00000530565 TROQ12816 1431 aaPredicted RBP13.52□□□□□ -0.25
CTSF-208ENST00000530565 REREQ9P2R6 1566 aa13.52□□□□□ -0.25
CTSF-208ENST00000530565 ZNF518AQ6AHZ1 1483 aa13.51□□□□□ -0.25
CTSF-208ENST00000530565 C3P01024 1663 aa13.5□□□□□ -0.25
CTSF-208ENST00000530565 ABCA6Q8N139 1617 aa13.5□□□□□ -0.25
CTSF-208ENST00000530565 TIAM1Q13009 1591 aa13.5□□□□□ -0.25
CTSF-208ENST00000530565 CDC42BPBQ9Y5S2 1711 aa13.5□□□□□ -0.25
CTSF-208ENST00000530565 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
CTSF-208ENST00000530565 EFCAB2Q5VUJ9 269 aa13.49□□□□□ -0.25
CTSF-208ENST00000530565 ILDR2Q71H61 639 aa13.48□□□□□ -0.25
CTSF-208ENST00000530565 ARHGAP5Q13017 1502 aa13.48□□□□□ -0.25
CTSF-208ENST00000530565 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
CTSF-208ENST00000530565 MTUS2Q5JR59 1369 aa13.47□□□□□ -0.25
CTSF-208ENST00000530565 EHBP1L1Q8N3D4 1523 aa13.47□□□□□ -0.25
CTSF-208ENST00000530565 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
CTSF-208ENST00000530565 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
CTSF-208ENST00000530565 MLH3Q9UHC1 1453 aa13.46□□□□□ -0.25
CTSF-208ENST00000530565 LTBP4Q8N2S1 1624 aa13.46□□□□□ -0.26
CTSF-208ENST00000530565 AGLP35573 1532 aa13.45□□□□□ -0.26
CTSF-208ENST00000530565 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
CTSF-208ENST00000530565 APLP2Q06481 763 aa13.45□□□□□ -0.26
CTSF-208ENST00000530565 PREX2Q70Z35 1606 aa13.45□□□□□ -0.26
CTSF-208ENST00000530565 PTPRTO14522 1441 aa13.45□□□□□ -0.26
CTSF-208ENST00000530565 ABCC1P33527 1531 aa13.44□□□□□ -0.26
CTSF-208ENST00000530565 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
CTSF-208ENST00000530565 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
CTSF-208ENST00000530565 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
CTSF-208ENST00000530565 KIDINS220Q9ULH0 1771 aa13.43□□□□□ -0.26
CTSF-208ENST00000530565 TRAPPC8Q9Y2L5 1435 aa13.42□□□□□ -0.26
CTSF-208ENST00000530565 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
CTSF-208ENST00000530565 KANK4Q5T7N3 995 aaPredicted RBP13.41□□□□□ -0.26
CTSF-208ENST00000530565 SUPT6HQ7KZ85 1726 aaKnown RBP13.41□□□□□ -0.26
CTSF-208ENST00000530565 CDC42BPAQ5VT25 1732 aa13.4□□□□□ -0.26
CTSF-208ENST00000530565 SOCS7O14512 581 aa13.4□□□□□ -0.26
CTSF-208ENST00000530565 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
CTSF-208ENST00000530565 IQSEC2Q5JU85 1478 aa13.39□□□□□ -0.27
CTSF-208ENST00000530565 MROH2AA6NES4 1674 aa13.38□□□□□ -0.27
CTSF-208ENST00000530565 NCOA2Q15596 1464 aa13.38□□□□□ -0.27
CTSF-208ENST00000530565 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
CTSF-208ENST00000530565 GPATCH8Q9UKJ3 1502 aaKnown RBP13.36□□□□□ -0.27
CTSF-208ENST00000530565 SAMD9LQ8IVG5 1584 aa13.36□□□□□ -0.27
CTSF-208ENST00000530565 CAMSAP1Q5T5Y3 1602 aa13.35□□□□□ -0.27
CTSF-208ENST00000530565 CNTLNQ9NXG0 1405 aa13.35□□□□□ -0.27
CTSF-208ENST00000530565 MYT1LQ9UL68 1186 aa13.34□□□□□ -0.27
CTSF-208ENST00000530565 NPATQ14207 1427 aa13.33□□□□□ -0.28
CTSF-208ENST00000530565 ZNF142P52746 1687 aaPredicted RBP13.33□□□□□ -0.28
CTSF-208ENST00000530565 PLXNC1O60486 1568 aa13.32□□□□□ -0.28
CTSF-208ENST00000530565 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
CTSF-208ENST00000530565 CLTCQ00610 1675 aaKnown RBP13.31□□□□□ -0.28
CTSF-208ENST00000530565 SYCP2Q9BX26 1530 aa13.31□□□□□ -0.28
CTSF-208ENST00000530565 CFDP1Q9UEE9 299 aaPredicted RBP13.31□□□□□ -0.28
CTSF-208ENST00000530565 INO80Q9ULG1 1556 aaPredicted RBP13.3□□□□□ -0.28
CTSF-208ENST00000530565 ESF1Q9H501 851 aaKnown RBP13.3□□□□□ -0.28
CTSF-208ENST00000530565 ZMYM3Q14202 1370 aa13.29□□□□□ -0.28
CTSF-208ENST00000530565 MYOM3Q5VTT5 1437 aa13.29□□□□□ -0.28
CTSF-208ENST00000530565 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
CTSF-208ENST00000530565 ZNF777Q9ULD5 760 aaPredicted RBP13.28□□□□□ -0.28
CTSF-208ENST00000530565 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
CTSF-208ENST00000530565 TCOF1Q13428 1488 aaKnown RBP13.28□□□□□ -0.28
CTSF-208ENST00000530565 ATP7AQ04656 1500 aa13.28□□□□□ -0.28
CTSF-208ENST00000530565 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
CTSF-208ENST00000530565 ZNF335Q9H4Z2 1342 aaPredicted RBP13.27□□□□□ -0.29
CTSF-208ENST00000530565 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
CTSF-208ENST00000530565 PTPRKQ15262 1439 aa13.26□□□□□ -0.29
CTSF-208ENST00000530565 PLEKHH2Q8IVE3 1493 aa13.26□□□□□ -0.29
CTSF-208ENST00000530565 MIA2Q96PC5 1412 aa13.26□□□□□ -0.29
CTSF-208ENST00000530565 ZNF644Q9H582 1327 aaPredicted RBP13.25□□□□□ -0.29
CTSF-208ENST00000530565 A2MP01023 1474 aa13.24□□□□□ -0.29
CTSF-208ENST00000530565 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
CTSF-208ENST00000530565 KIAA1107Q9UPP5 1409 aa13.24□□□□□ -0.29
CTSF-208ENST00000530565 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
CTSF-208ENST00000530565 HNRNPMP52272 730 aaKnown RBP eCLIP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms