RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 HNRNPMP52272 730 aaKnown RBP eCLIP6.29□□□□□ -1.4
CASP4-207ENST00000529565 BIVM-ERCC5R4GMW8 1640 aa6.29□□□□□ -1.4
CASP4-207ENST00000529565 SNAPC4Q5SXM2 1469 aa6.29□□□□□ -1.4
CASP4-207ENST00000529565 ARAP1Q96P48 1450 aa6.29□□□□□ -1.4
CASP4-207ENST00000529565 DCAF11Q8TEB1 546 aa6.28□□□□□ -1.4
CASP4-207ENST00000529565 HIRIP3Q9BW71 556 aaPredicted RBP6.28□□□□□ -1.4
CASP4-207ENST00000529565 FGD6Q6ZV73 1430 aa6.28□□□□□ -1.4
CASP4-207ENST00000529565 TRHP20396 242 aaPredicted RBP6.28□□□□□ -1.4
CASP4-207ENST00000529565 MIER1Q8N108 512 aa6.28□□□□□ -1.4
CASP4-207ENST00000529565 KIAA0586Q9BVV6 1533 aa6.28□□□□□ -1.4
CASP4-207ENST00000529565 DNAJC5Q9H3Z4 198 aa6.28□□□□□ -1.4
CASP4-207ENST00000529565 KNSTRNQ9Y448 316 aa6.28□□□□□ -1.4
CASP4-207ENST00000529565 SYNJ2O15056 1496 aa6.27□□□□□ -1.4
CASP4-207ENST00000529565 GGT6Q6P531 493 aa6.27□□□□□ -1.41
CASP4-207ENST00000529565 DNAJC5BQ9UF47 199 aa6.27□□□□□ -1.41
CASP4-207ENST00000529565 PRG4Q92954 1404 aaPredicted RBP6.27□□□□□ -1.41
CASP4-207ENST00000529565 TPRNQ4KMQ1 711 aa6.27□□□□□ -1.41
CASP4-207ENST00000529565 MAGI1Q96QZ7 1491 aaPredicted RBP6.27□□□□□ -1.41
CASP4-207ENST00000529565 KIF3BO15066 747 aa6.26□□□□□ -1.41
CASP4-207ENST00000529565 NPM3O75607 178 aaKnown RBP6.26□□□□□ -1.41
CASP4-207ENST00000529565 TMF1P82094 1093 aa6.26□□□□□ -1.41
CASP4-207ENST00000529565 URB2Q14146 1524 aaKnown RBP6.26□□□□□ -1.41
CASP4-207ENST00000529565 PRDM2Q13029 1718 aa6.26□□□□□ -1.41
CASP4-207ENST00000529565 CFAP53Q96M91 514 aa6.26□□□□□ -1.41
CASP4-207ENST00000529565 NCOA2Q15596 1464 aa6.26□□□□□ -1.41
CASP4-207ENST00000529565 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.25□□□□□ -1.41
CASP4-207ENST00000529565 POGKQ9P215 609 aa6.25□□□□□ -1.41
CASP4-207ENST00000529565 EHBP1L1Q8N3D4 1523 aa6.25□□□□□ -1.41
CASP4-207ENST00000529565 DHX57Q6P158 1386 aaKnown RBP6.25□□□□□ -1.41
CASP4-207ENST00000529565 HECW1Q76N89 1606 aa6.25□□□□□ -1.41
CASP4-207ENST00000529565 PLCB2Q00722 1185 aa6.25□□□□□ -1.41
CASP4-207ENST00000529565 PHLDB1Q86UU1 1377 aa6.24□□□□□ -1.41
CASP4-207ENST00000529565 IQGAP2Q13576 1575 aa6.24□□□□□ -1.41
CASP4-207ENST00000529565 KLHL34Q8N239 644 aa6.24□□□□□ -1.41
CASP4-207ENST00000529565 RRBP1Q9P2E9 1410 aaKnown RBP6.24□□□□□ -1.41
CASP4-207ENST00000529565 CYB5RLQ6IPT4 315 aa6.24□□□□□ -1.41
CASP4-207ENST00000529565 MIA2Q96PC5 1412 aa6.23□□□□□ -1.41
CASP4-207ENST00000529565 MLECQ14165 292 aa6.23□□□□□ -1.41
CASP4-207ENST00000529565 HSPA5P11021 654 aaKnown RBP6.23□□□□□ -1.41
CASP4-207ENST00000529565 C14orf37Q86TY3 774 aa6.23□□□□□ -1.41
CASP4-207ENST00000529565 TROQ12816 1431 aaPredicted RBP6.23□□□□□ -1.41
CASP4-207ENST00000529565 WASHC2CQ9Y4E1 1318 aa6.23□□□□□ -1.41
CASP4-207ENST00000529565 TIAM1Q13009 1591 aa6.22□□□□□ -1.41
CASP4-207ENST00000529565 UACAQ9BZF9 1416 aa6.22□□□□□ -1.41
CASP4-207ENST00000529565 GRIN2AQ12879 1464 aa6.22□□□□□ -1.41
CASP4-207ENST00000529565 PLEKHH2Q8IVE3 1493 aa6.22□□□□□ -1.41
CASP4-207ENST00000529565 EIF3AQ14152 1382 aaKnown RBP6.22□□□□□ -1.41
CASP4-207ENST00000529565 MYT1Q01538 1121 aa6.22□□□□□ -1.41
CASP4-207ENST00000529565 L3MBTL2Q969R5 705 aa6.22□□□□□ -1.41
CASP4-207ENST00000529565 ROCK2O75116 1388 aaKnown RBP6.22□□□□□ -1.41
CASP4-207ENST00000529565 CCDC144AA2RUR9 1427 aa6.21□□□□□ -1.41
CASP4-207ENST00000529565 FKBP8Q14318 412 aa6.21□□□□□ -1.41
CASP4-207ENST00000529565 CCER2I3L3R5 266 aa6.21□□□□□ -1.42
CASP4-207ENST00000529565 ARXQ96QS3 562 aa6.21□□□□□ -1.42
CASP4-207ENST00000529565 MAP3K1Q13233 1512 aa6.21□□□□□ -1.42
CASP4-207ENST00000529565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.21□□□□□ -1.42
CASP4-207ENST00000529565 STAC3Q96MF2 364 aa6.2□□□□□ -1.42
CASP4-207ENST00000529565 NUDCQ9Y266 331 aa6.2□□□□□ -1.42
CASP4-207ENST00000529565 KIF15Q9NS87 1388 aa6.2□□□□□ -1.42
CASP4-207ENST00000529565 SALL2Q9Y467 1007 aaPredicted RBP6.2□□□□□ -1.42
CASP4-207ENST00000529565 ARHGAP5Q13017 1502 aa6.19□□□□□ -1.42
CASP4-207ENST00000529565 ANKRD50Q9ULJ7 1429 aa6.19□□□□□ -1.42
CASP4-207ENST00000529565 EPRSP07814 1512 aaKnown RBP6.19□□□□□ -1.42
CASP4-207ENST00000529565 SUPT6HQ7KZ85 1726 aaKnown RBP6.18□□□□□ -1.42
CASP4-207ENST00000529565 ZNF644Q9H582 1327 aaPredicted RBP6.18□□□□□ -1.42
CASP4-207ENST00000529565 PNNQ9H307 717 aaKnown RBP6.18□□□□□ -1.42
CASP4-207ENST00000529565 SRPK2P78362 688 aaKnown RBP6.18□□□□□ -1.42
CASP4-207ENST00000529565 FAM69CQ0P6D2 419 aa6.18□□□□□ -1.42
CASP4-207ENST00000529565 ZNF608Q9ULD9 1512 aaPredicted RBP6.17□□□□□ -1.42
CASP4-207ENST00000529565 KTN1Q86UP2 1357 aaKnown RBP6.17□□□□□ -1.42
CASP4-207ENST00000529565 RALBP1Q15311 655 aa6.17□□□□□ -1.42
CASP4-207ENST00000529565 EID1Q9Y6B2 187 aa6.17□□□□□ -1.42
CASP4-207ENST00000529565 RTL5Q5HYW3 569 aaPredicted RBP6.17□□□□□ -1.42
CASP4-207ENST00000529565 VGFO15240 615 aaPredicted RBP6.16□□□□□ -1.42
CASP4-207ENST00000529565 HDGFL2Q7Z4V5 671 aaPredicted RBP6.16□□□□□ -1.42
CASP4-207ENST00000529565 CCDC136Q96JN2 1154 aa6.16□□□□□ -1.42
CASP4-207ENST00000529565 PCF11O94913 1555 aaKnown RBP6.16□□□□□ -1.42
CASP4-207ENST00000529565 MAPK8IP3Q9UPT6 1336 aa6.16□□□□□ -1.42
CASP4-207ENST00000529565 CC2D1BQ5T0F9 858 aaKnown RBP6.16□□□□□ -1.42
CASP4-207ENST00000529565 HFM1A2PYH4 1435 aa6.15□□□□□ -1.42
CASP4-207ENST00000529565 MORC1Q86VD1 984 aa6.15□□□□□ -1.42
CASP4-207ENST00000529565 C9orf84Q5VXU9 1444 aa6.15□□□□□ -1.43
CASP4-207ENST00000529565 ANP32AP39687 249 aaKnown RBP6.15□□□□□ -1.43
CASP4-207ENST00000529565 STK26Q9P289 416 aa6.14□□□□□ -1.43
CASP4-207ENST00000529565 ROCK1Q13464 1354 aa6.14□□□□□ -1.43
CASP4-207ENST00000529565 PPM1GO15355 546 aaPredicted RBP6.14□□□□□ -1.43
CASP4-207ENST00000529565 CDK13Q14004 1512 aaKnown RBP6.14□□□□□ -1.43
CASP4-207ENST00000529565 THOC2Q8NI27 1593 aaKnown RBP6.14□□□□□ -1.43
CASP4-207ENST00000529565 HAP1P54257 671 aaPredicted RBP6.13□□□□□ -1.43
CASP4-207ENST00000529565 TERF2IPQ9NYB0 399 aa6.13□□□□□ -1.43
CASP4-207ENST00000529565 DAPK1P53355 1430 aa6.13□□□□□ -1.43
CASP4-207ENST00000529565 UPF2Q9HAU5 1272 aaKnown RBP6.13□□□□□ -1.43
CASP4-207ENST00000529565 ZBTB7CA1YPR0 619 aa6.13□□□□□ -1.43
CASP4-207ENST00000529565 SAFB2Q14151 953 aaKnown RBP eCLIP6.13□□□□□ -1.43
CASP4-207ENST00000529565 AFAP1Q8N556 730 aa6.13□□□□□ -1.43
CASP4-207ENST00000529565 MYH16Q9H6N6 1097 aa6.13□□□□□ -1.43
CASP4-207ENST00000529565 PLB1Q6P1J6 1458 aa6.12□□□□□ -1.43
CASP4-207ENST00000529565 WDR62O43379 1518 aa6.12□□□□□ -1.43
CASP4-207ENST00000529565 KIF14Q15058 1648 aa6.12□□□□□ -1.43
CASP4-207ENST00000529565 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms