RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 RAPGEF3O95398 923 aa10.26□□□□□ -0.77
NUP98-215ENST00000529063 TTC37Q6PGP7 1564 aa10.26□□□□□ -0.77
NUP98-215ENST00000529063 RIMS1Q86UR5 1692 aaKnown RBP10.25□□□□□ -0.77
NUP98-215ENST00000529063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.24□□□□□ -0.77
NUP98-215ENST00000529063 PCF11O94913 1555 aaKnown RBP10.24□□□□□ -0.77
NUP98-215ENST00000529063 LMTK3Q96Q04 1460 aa10.23□□□□□ -0.77
NUP98-215ENST00000529063 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
NUP98-215ENST00000529063 CFAP74Q9C0B2 1584 aa10.23□□□□□ -0.77
NUP98-215ENST00000529063 EFCAB5A4FU69 1503 aa10.22□□□□□ -0.77
NUP98-215ENST00000529063 CDK13Q14004 1512 aaKnown RBP10.21□□□□□ -0.78
NUP98-215ENST00000529063 FANCAO15360 1455 aa10.2□□□□□ -0.78
NUP98-215ENST00000529063 DENND4BO75064 1496 aaPredicted RBP10.2□□□□□ -0.78
NUP98-215ENST00000529063 EEA1Q15075 1411 aa10.2□□□□□ -0.78
NUP98-215ENST00000529063 AKNAQ7Z591 1439 aa10.2□□□□□ -0.78
NUP98-215ENST00000529063 YEATS2Q9ULM3 1422 aa10.19□□□□□ -0.78
NUP98-215ENST00000529063 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
NUP98-215ENST00000529063 ZFYVE16Q7Z3T8 1539 aa10.18□□□□□ -0.78
NUP98-215ENST00000529063 FER1L4A9Z1Z3 1794 aa10.17□□□□□ -0.78
NUP98-215ENST00000529063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.17□□□□□ -0.78
NUP98-215ENST00000529063 HNRNPUL2Q1KMD3 747 aaKnown RBP10.17□□□□□ -0.78
NUP98-215ENST00000529063 RANGAP1P46060 587 aaPredicted RBP10.16□□□□□ -0.78
NUP98-215ENST00000529063 FAM9AQ8IZU1 332 aaPredicted RBP10.16□□□□□ -0.78
NUP98-215ENST00000529063 FBXO41Q8TF61 875 aa10.16□□□□□ -0.78
NUP98-215ENST00000529063 LRRIQ1Q96JM4 1722 aa10.16□□□□□ -0.78
NUP98-215ENST00000529063 MYO5CQ9NQX4 1742 aa10.15□□□□□ -0.78
NUP98-215ENST00000529063 POGZQ7Z3K3 1410 aa10.15□□□□□ -0.79
NUP98-215ENST00000529063 KIF14Q15058 1648 aa10.15□□□□□ -0.79
NUP98-215ENST00000529063 ARID4BQ4LE39 1312 aaPredicted RBP10.14□□□□□ -0.79
NUP98-215ENST00000529063 MAGI2Q86UL8 1455 aa10.14□□□□□ -0.79
NUP98-215ENST00000529063 ARHGEF12Q9NZN5 1544 aa10.13□□□□□ -0.79
NUP98-215ENST00000529063 PLEKHD1A6NEE1 506 aa10.13□□□□□ -0.79
NUP98-215ENST00000529063 ARHGAP35Q9NRY4 1499 aa10.12□□□□□ -0.79
NUP98-215ENST00000529063 PLCH2O75038 1416 aa10.12□□□□□ -0.79
NUP98-215ENST00000529063 KDM5CP41229 1560 aa10.11□□□□□ -0.79
NUP98-215ENST00000529063 SCAPERQ9BY12 1400 aa10.11□□□□□ -0.79
NUP98-215ENST00000529063 PREX1Q8TCU6 1659 aa10.1□□□□□ -0.79
NUP98-215ENST00000529063 HSPA2P54652 639 aa10.1□□□□□ -0.79
NUP98-215ENST00000529063 CDC42BPBQ9Y5S2 1711 aa10.09□□□□□ -0.79
NUP98-215ENST00000529063 DIP2CQ9Y2E4 1556 aa10.09□□□□□ -0.79
NUP98-215ENST00000529063 C9orf84Q5VXU9 1444 aa10.08□□□□□ -0.8
NUP98-215ENST00000529063 ABCA6Q8N139 1617 aa10.08□□□□□ -0.8
NUP98-215ENST00000529063 ATP10AO60312 1499 aa10.08□□□□□ -0.8
NUP98-215ENST00000529063 STRCQ7RTU9 1775 aa10.08□□□□□ -0.8
NUP98-215ENST00000529063 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
NUP98-215ENST00000529063 REREQ9P2R6 1566 aa10.06□□□□□ -0.8
NUP98-215ENST00000529063 ZNF518AQ6AHZ1 1483 aa10.06□□□□□ -0.8
NUP98-215ENST00000529063 DCAF8L1A6NGE4 600 aa10.06□□□□□ -0.8
NUP98-215ENST00000529063 PREX2Q70Z35 1606 aa10.06□□□□□ -0.8
NUP98-215ENST00000529063 TROQ12816 1431 aaPredicted RBP10.06□□□□□ -0.8
NUP98-215ENST00000529063 ITSN2Q9NZM3 1697 aa10.06□□□□□ -0.8
NUP98-215ENST00000529063 MLECQ14165 292 aa10.05□□□□□ -0.8
NUP98-215ENST00000529063 ATF5Q9Y2D1 282 aaPredicted RBP10.05□□□□□ -0.8
NUP98-215ENST00000529063 ARHGAP5Q13017 1502 aa10.05□□□□□ -0.8
NUP98-215ENST00000529063 ABCC1P33527 1531 aa10.04□□□□□ -0.8
NUP98-215ENST00000529063 C3P01024 1663 aa10.04□□□□□ -0.8
NUP98-215ENST00000529063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.04□□□□□ -0.87e-10■■□□□ 13.4
NUP98-215ENST00000529063 CDC42BPAQ5VT25 1732 aa10.03□□□□□ -0.8
NUP98-215ENST00000529063 KIDINS220Q9ULH0 1771 aa10.02□□□□□ -0.81
NUP98-215ENST00000529063 EFCAB2Q5VUJ9 269 aa10.02□□□□□ -0.81
NUP98-215ENST00000529063 CEBPAP49715 358 aaPredicted RBP10.01□□□□□ -0.81
NUP98-215ENST00000529063 MLH3Q9UHC1 1453 aa10.01□□□□□ -0.81
NUP98-215ENST00000529063 AGLP35573 1532 aa10.01□□□□□ -0.81
NUP98-215ENST00000529063 CLIP1P30622 1438 aa10□□□□□ -0.81
NUP98-215ENST00000529063 TRAPPC8Q9Y2L5 1435 aa10□□□□□ -0.81
NUP98-215ENST00000529063 SAMD1Q6SPF0 538 aaPredicted RBP10□□□□□ -0.81
NUP98-215ENST00000529063 AFAP1Q8N556 730 aa10□□□□□ -0.81
NUP98-215ENST00000529063 CERKQ8TCT0 537 aa10□□□□□ -0.81
NUP98-215ENST00000529063 UBTFP17480 764 aaKnown RBP9.99□□□□□ -0.81
NUP98-215ENST00000529063 ATP1B4Q9UN42 357 aaPredicted RBP9.99□□□□□ -0.81
NUP98-215ENST00000529063 SETD1BQ9UPS6 1966 aaKnown RBP9.99□□□□□ -0.81
NUP98-215ENST00000529063 SAMD9LQ8IVG5 1584 aa9.98□□□□□ -0.81
NUP98-215ENST00000529063 UHRF1BP1Q6BDS2 1440 aa9.98□□□□□ -0.81
NUP98-215ENST00000529063 CASKIN1Q8WXD9 1431 aa9.98□□□□□ -0.81
NUP98-215ENST00000529063 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
NUP98-215ENST00000529063 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
NUP98-215ENST00000529063 MROH2AA6NES4 1674 aa9.96□□□□□ -0.81
NUP98-215ENST00000529063 LTBP4Q8N2S1 1624 aa9.96□□□□□ -0.82
NUP98-215ENST00000529063 FYCO1Q9BQS8 1478 aa9.95□□□□□ -0.82
NUP98-215ENST00000529063 SYCP2Q9BX26 1530 aa9.95□□□□□ -0.82
NUP98-215ENST00000529063 PLXNC1O60486 1568 aa9.95□□□□□ -0.82
NUP98-215ENST00000529063 INO80Q9ULG1 1556 aaPredicted RBP9.95□□□□□ -0.82
NUP98-215ENST00000529063 PTPRTO14522 1441 aa9.94□□□□□ -0.82
NUP98-215ENST00000529063 SUPT6HQ7KZ85 1726 aaKnown RBP9.93□□□□□ -0.82
NUP98-215ENST00000529063 NCOA1Q15788 1441 aa9.93□□□□□ -0.82
NUP98-215ENST00000529063 ZNF142P52746 1687 aaPredicted RBP9.93□□□□□ -0.82
NUP98-215ENST00000529063 GPATCH8Q9UKJ3 1502 aaKnown RBP9.92□□□□□ -0.82
NUP98-215ENST00000529063 U3KPZ7 1027 aaPredicted RBP9.92□□□□□ -0.82
NUP98-215ENST00000529063 CLTCQ00610 1675 aaKnown RBP9.92□□□□□ -0.82
NUP98-215ENST00000529063 MYO3AQ8NEV4 1616 aa9.92□□□□□ -0.82
NUP98-215ENST00000529063 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
NUP98-215ENST00000529063 CNTLNQ9NXG0 1405 aa9.91□□□□□ -0.82
NUP98-215ENST00000529063 CAMSAP1Q5T5Y3 1602 aa9.9□□□□□ -0.82
NUP98-215ENST00000529063 SPATA31D1Q6ZQQ2 1576 aa9.89□□□□□ -0.83
NUP98-215ENST00000529063 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
NUP98-215ENST00000529063 NPATQ14207 1427 aa9.89□□□□□ -0.83
NUP98-215ENST00000529063 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
NUP98-215ENST00000529063 IQSEC2Q5JU85 1478 aa9.88□□□□□ -0.83
NUP98-215ENST00000529063 ILDR2Q71H61 639 aa9.88□□□□□ -0.83
NUP98-215ENST00000529063 CEP170BQ9Y4F5 1589 aaPredicted RBP9.88□□□□□ -0.83
NUP98-215ENST00000529063 ADGBQ8N7X0 1667 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms