RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 ITSN2Q9NZM3 1697 aa37.65■■■■□ 3.62
LDLRAD3-203ENST00000528989 PREX2Q70Z35 1606 aa37.64■■■■□ 3.62
LDLRAD3-203ENST00000528989 PTPN23Q9H3S7 1636 aa37.64■■■■□ 3.62
LDLRAD3-203ENST00000528989 ARHGAP5Q13017 1502 aa37.63■■■■□ 3.61
LDLRAD3-203ENST00000528989 MYO5CQ9NQX4 1742 aa37.63■■■■□ 3.61
LDLRAD3-203ENST00000528989 ITGAEP38570 1179 aa37.62■■■■□ 3.61
LDLRAD3-203ENST00000528989 GLI2P10070 1586 aa37.6■■■■□ 3.61
LDLRAD3-203ENST00000528989 EFCAB2Q5VUJ9 269 aa37.58■■■■□ 3.61
LDLRAD3-203ENST00000528989 TCOF1Q13428 1488 aaKnown RBP37.58■■■■□ 3.61
LDLRAD3-203ENST00000528989 CAMSAP2Q08AD1 1489 aa37.55■■■■□ 3.6
LDLRAD3-203ENST00000528989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.53■■■■□ 3.6
LDLRAD3-203ENST00000528989 MAP3K4Q9Y6R4 1608 aa37.52■■■■□ 3.6
LDLRAD3-203ENST00000528989 FANCAO15360 1455 aa37.51■■■■□ 3.6
LDLRAD3-203ENST00000528989 HNRNPMP52272 730 aaKnown RBP eCLIP37.51■■■■□ 3.6
LDLRAD3-203ENST00000528989 TRHP20396 242 aaPredicted RBP37.5■■■■□ 3.59
LDLRAD3-203ENST00000528989 SAMD9LQ8IVG5 1584 aa37.5■■■■□ 3.59
LDLRAD3-203ENST00000528989 KIF13AQ9H1H9 1805 aa37.5■■■■□ 3.59
LDLRAD3-203ENST00000528989 ARAP3Q8WWN8 1544 aa37.49■■■■□ 3.59
LDLRAD3-203ENST00000528989 PTPRKQ15262 1439 aa37.42■■■■□ 3.58
LDLRAD3-203ENST00000528989 ARHGEF12Q9NZN5 1544 aa37.4■■■■□ 3.58
LDLRAD3-203ENST00000528989 TSPOAP1O95153 1857 aa37.39■■■■□ 3.58
LDLRAD3-203ENST00000528989 MBD5Q9P267 1494 aa37.39■■■■□ 3.58
LDLRAD3-203ENST00000528989 AKNAQ7Z591 1439 aa37.39■■■■□ 3.58
LDLRAD3-203ENST00000528989 ABCC5O15440 1437 aa37.38■■■■□ 3.57
LDLRAD3-203ENST00000528989 SYCP2Q9BX26 1530 aa37.37■■■■□ 3.57
LDLRAD3-203ENST00000528989 CHIC2Q9UKJ5 165 aa37.37■■■■□ 3.57
LDLRAD3-203ENST00000528989 DAPK1P53355 1430 aa37.35■■■■□ 3.57
LDLRAD3-203ENST00000528989 KIAA1107Q9UPP5 1409 aa37.35■■■■□ 3.57
LDLRAD3-203ENST00000528989 ADGRL1O94910 1474 aa37.33■■■■□ 3.57
LDLRAD3-203ENST00000528989 ABCC1P33527 1531 aa37.33■■■■□ 3.57
LDLRAD3-203ENST00000528989 PPRC1Q5VV67 1664 aaKnown RBP37.33■■■■□ 3.57
LDLRAD3-203ENST00000528989 SCAPERQ9BY12 1400 aa37.32■■■■□ 3.56
LDLRAD3-203ENST00000528989 PLEKHH2Q8IVE3 1493 aa37.32■■■■□ 3.56
LDLRAD3-203ENST00000528989 AFAP1Q8N556 730 aa37.3■■■■□ 3.56
LDLRAD3-203ENST00000528989 TRAPPC8Q9Y2L5 1435 aa37.3■■■■□ 3.56
LDLRAD3-203ENST00000528989 DNMT1P26358 1616 aaKnown RBP37.29■■■■□ 3.56
LDLRAD3-203ENST00000528989 NEO1Q92859 1461 aa37.29■■■■□ 3.56
LDLRAD3-203ENST00000528989 RSPH4AQ5TD94 716 aa37.25■■■■□ 3.55
LDLRAD3-203ENST00000528989 TSPY4P0CV99 314 aa37.24■■■■□ 3.55
LDLRAD3-203ENST00000528989 TSPY10P0CW01 314 aa37.24■■■■□ 3.55
LDLRAD3-203ENST00000528989 ARHGEF5Q12774 1597 aa37.23■■■■□ 3.55
LDLRAD3-203ENST00000528989 CCDC141Q6ZP82 1450 aa37.23■■■■□ 3.55
LDLRAD3-203ENST00000528989 TEX14Q8IWB6 1497 aa37.23■■■■□ 3.55
LDLRAD3-203ENST00000528989 CFAP74Q9C0B2 1584 aa37.23■■■■□ 3.55
LDLRAD3-203ENST00000528989 RAPGEF3O95398 923 aa37.21■■■■□ 3.55
LDLRAD3-203ENST00000528989 RRP7BPQ9NSQ0 103 aa37.2■■■■□ 3.55
LDLRAD3-203ENST00000528989 C9orf84Q5VXU9 1444 aa37.16■■■■□ 3.54
LDLRAD3-203ENST00000528989 CROCC2H7BZ55 1655 aa37.12■■■■□ 3.53
LDLRAD3-203ENST00000528989 POGZQ7Z3K3 1410 aa37.11■■■■□ 3.53
LDLRAD3-203ENST00000528989 DENND4BO75064 1496 aaPredicted RBP37.11■■■■□ 3.53
LDLRAD3-203ENST00000528989 SHANK2Q9UPX8 1470 aa37.1■■■■□ 3.53
LDLRAD3-203ENST00000528989 SPAG9O60271 1321 aaKnown RBP37.09■■■■□ 3.53
LDLRAD3-203ENST00000528989 COL17A1Q9UMD9 1497 aaPredicted RBP37.09■■■■□ 3.53
LDLRAD3-203ENST00000528989 NCOA1Q15788 1441 aa37.08■■■■□ 3.53
LDLRAD3-203ENST00000528989 ZNF518AQ6AHZ1 1483 aa37.08■■■■□ 3.53
LDLRAD3-203ENST00000528989 ROCK1Q13464 1354 aa37.06■■■■□ 3.52
LDLRAD3-203ENST00000528989 MYT1LQ9UL68 1186 aa37.05■■■■□ 3.52
LDLRAD3-203ENST00000528989 ANKRD30AQ9BXX3 1397 aa37.04■■■■□ 3.52
LDLRAD3-203ENST00000528989 NAIPQ13075 1403 aa37.03■■■■□ 3.52
LDLRAD3-203ENST00000528989 HFM1A2PYH4 1435 aa37.02■■■■□ 3.52
LDLRAD3-203ENST00000528989 ADGRL2O95490 1459 aa37.02■■■■□ 3.52
LDLRAD3-203ENST00000528989 SETD5Q9C0A6 1442 aa37■■■■□ 3.51
LDLRAD3-203ENST00000528989 MAST1Q9Y2H9 1570 aa36.99■■■■□ 3.51
LDLRAD3-203ENST00000528989 KDM5CP41229 1560 aa36.97■■■■□ 3.51
LDLRAD3-203ENST00000528989 RICTORQ6R327 1708 aa36.97■■■■□ 3.51
LDLRAD3-203ENST00000528989 FRMPD1Q5SYB0 1578 aa36.96■■■■□ 3.51
LDLRAD3-203ENST00000528989 RAB3GAP2Q9H2M9 1393 aa36.96■■■■□ 3.51
LDLRAD3-203ENST00000528989 KIF15Q9NS87 1388 aa36.96■■■■□ 3.51
LDLRAD3-203ENST00000528989 RTEL1-TNFRSF6BF6WH68 1400 aa36.96■■■■□ 3.51
LDLRAD3-203ENST00000528989 ZFYVE16Q7Z3T8 1539 aa36.95■■■■□ 3.51
LDLRAD3-203ENST00000528989 ADGBQ8N7X0 1667 aa36.94■■■■□ 3.5
LDLRAD3-203ENST00000528989 ATP7AQ04656 1500 aa36.93■■■■□ 3.5
LDLRAD3-203ENST00000528989 INO80Q9ULG1 1556 aaPredicted RBP36.9■■■■□ 3.5
LDLRAD3-203ENST00000528989 MLH3Q9UHC1 1453 aa36.9■■■■□ 3.5
LDLRAD3-203ENST00000528989 KIDINS220Q9ULH0 1771 aa36.88■■■■□ 3.49
LDLRAD3-203ENST00000528989 KDM6BO15054 1643 aa36.87■■■■□ 3.49
LDLRAD3-203ENST00000528989 HECW2Q9P2P5 1572 aa36.85■■■■□ 3.49
LDLRAD3-203ENST00000528989 PLXNC1O60486 1568 aa36.84■■■■□ 3.49
LDLRAD3-203ENST00000528989 ANKRD50Q9ULJ7 1429 aa36.84■■■■□ 3.49
LDLRAD3-203ENST00000528989 YEATS2Q9ULM3 1422 aa36.83■■■■□ 3.49
LDLRAD3-203ENST00000528989 GCC2Q8IWJ2 1684 aa36.83■■■■□ 3.49
LDLRAD3-203ENST00000528989 ZMYM4Q5VZL5 1548 aa36.79■■■■□ 3.48
LDLRAD3-203ENST00000528989 HRCP23327 699 aa36.75■■■■□ 3.47
LDLRAD3-203ENST00000528989 DUOX2Q9NRD8 1548 aa36.75■■■■□ 3.47
LDLRAD3-203ENST00000528989 ABCA6Q8N139 1617 aa36.74■■■■□ 3.47
LDLRAD3-203ENST00000528989 DHX29Q7Z478 1369 aaKnown RBP36.72■■■■□ 3.47
LDLRAD3-203ENST00000528989 MAGI2Q86UL8 1455 aa36.72■■■■□ 3.47
LDLRAD3-203ENST00000528989 DIP2CQ9Y2E4 1556 aa36.69■■■■□ 3.46
LDLRAD3-203ENST00000528989 TRIM52Q96A61 297 aa36.69■■■■□ 3.46
LDLRAD3-203ENST00000528989 A2MP01023 1474 aa36.69■■■■□ 3.46
LDLRAD3-203ENST00000528989 ERBINQ96RT1 1412 aa36.66■■■■□ 3.46
LDLRAD3-203ENST00000528989 KIF3BO15066 747 aa36.65■■■■□ 3.46
LDLRAD3-203ENST00000528989 ATP10AO60312 1499 aa36.61■■■■□ 3.45
LDLRAD3-203ENST00000528989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.6■■■■□ 3.45
LDLRAD3-203ENST00000528989 DHX57Q6P158 1386 aaKnown RBP36.57■■■■□ 3.44
LDLRAD3-203ENST00000528989 CCER1Q8TC90 406 aaPredicted RBP36.55■■■■□ 3.44
LDLRAD3-203ENST00000528989 NUP155O75694 1391 aa36.55■■■■□ 3.44
LDLRAD3-203ENST00000528989 ARHGEF40Q8TER5 1519 aa36.54■■■■□ 3.44
LDLRAD3-203ENST00000528989 GGT6Q6P531 493 aa36.5■■■■□ 3.43
LDLRAD3-203ENST00000528989 MPHOSPH9Q99550 1183 aa36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms