RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
CAPRIN1-206ENST00000528948 WIZO95785 1651 aa12.58□□□□□ -0.4
CAPRIN1-206ENST00000528948 RNF25Q96BH1 459 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-206ENST00000528948 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
CAPRIN1-206ENST00000528948 CCDC88BA6NC98 1476 aa12.58□□□□□ -0.4
CAPRIN1-206ENST00000528948 DEKP35659 375 aaKnown RBP12.57□□□□□ -0.4
CAPRIN1-206ENST00000528948 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
CAPRIN1-206ENST00000528948 POTEB2H3BUK9 544 aa12.56□□□□□ -0.4
CAPRIN1-206ENST00000528948 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
CAPRIN1-206ENST00000528948 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
CAPRIN1-206ENST00000528948 C7P10643 843 aa12.54□□□□□ -0.4
CAPRIN1-206ENST00000528948 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
CAPRIN1-206ENST00000528948 RGL2O15211 777 aa12.53□□□□□ -0.4
CAPRIN1-206ENST00000528948 IER5LQ5T953 404 aa12.53□□□□□ -0.4
CAPRIN1-206ENST00000528948 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
CAPRIN1-206ENST00000528948 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
CAPRIN1-206ENST00000528948 ANP32CO43423 234 aa12.5□□□□□ -0.41
CAPRIN1-206ENST00000528948 RTL5Q5HYW3 569 aaPredicted RBP12.5□□□□□ -0.41
CAPRIN1-206ENST00000528948 UBE2Q2Q8WVN8 375 aa12.5□□□□□ -0.41
CAPRIN1-206ENST00000528948 SOGA1O94964 1423 aa12.5□□□□□ -0.41
CAPRIN1-206ENST00000528948 CECR2Q9BXF3 1484 aa12.49□□□□□ -0.41
CAPRIN1-206ENST00000528948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.48□□□□□ -0.41
CAPRIN1-206ENST00000528948 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
CAPRIN1-206ENST00000528948 SMARCA2P51531 1590 aa12.47□□□□□ -0.41
CAPRIN1-206ENST00000528948 BCANQ96GW7 911 aa12.47□□□□□ -0.41
CAPRIN1-206ENST00000528948 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
CAPRIN1-206ENST00000528948 USP35Q9P2H5 1018 aa12.47□□□□□ -0.41
CAPRIN1-206ENST00000528948 METRNQ9UJH8 293 aa12.47□□□□□ -0.41
CAPRIN1-206ENST00000528948 MKRN3Q13064 507 aaKnown RBP12.46□□□□□ -0.41
CAPRIN1-206ENST00000528948 NOP58Q9Y2X3 529 aaKnown RBP12.46□□□□□ -0.41
CAPRIN1-206ENST00000528948 ERICH3Q5RHP9 1530 aa12.45□□□□□ -0.42
CAPRIN1-206ENST00000528948 CABP2Q9NPB3 220 aa12.43□□□□□ -0.42
CAPRIN1-206ENST00000528948 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
CAPRIN1-206ENST00000528948 STK25O00506 426 aa12.41□□□□□ -0.42
CAPRIN1-206ENST00000528948 SEC24BO95487 1268 aa12.41□□□□□ -0.42
CAPRIN1-206ENST00000528948 MAP3K1Q13233 1512 aa12.41□□□□□ -0.42
CAPRIN1-206ENST00000528948 PPP1R15AO75807 674 aaPredicted RBP12.4□□□□□ -0.42
CAPRIN1-206ENST00000528948 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.42
CAPRIN1-206ENST00000528948 ANP32AP39687 249 aaKnown RBP12.39□□□□□ -0.43
CAPRIN1-206ENST00000528948 POTEMA6NI47 508 aa12.38□□□□□ -0.43
CAPRIN1-206ENST00000528948 PLCG2P16885 1265 aa12.38□□□□□ -0.43
CAPRIN1-206ENST00000528948 STK24Q9Y6E0 443 aa12.38□□□□□ -0.43
CAPRIN1-206ENST00000528948 CCNB3Q8WWL7 1395 aa12.38□□□□□ -0.43
CAPRIN1-206ENST00000528948 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
CAPRIN1-206ENST00000528948 OCEL1Q9H607 264 aa12.37□□□□□ -0.43
CAPRIN1-206ENST00000528948 SMARCA4P51532 1647 aa12.37□□□□□ -0.43
CAPRIN1-206ENST00000528948 SOX12O15370 315 aa12.36□□□□□ -0.43
CAPRIN1-206ENST00000528948 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
CAPRIN1-206ENST00000528948 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
CAPRIN1-206ENST00000528948 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
CAPRIN1-206ENST00000528948 POTEJP0CG39 1038 aa12.33□□□□□ -0.44
CAPRIN1-206ENST00000528948 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
CAPRIN1-206ENST00000528948 EFCAB3Q8N7B9 438 aa12.33□□□□□ -0.44
CAPRIN1-206ENST00000528948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.33□□□□□ -0.445e-13■□□□□ 9.9
CAPRIN1-206ENST00000528948 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
CAPRIN1-206ENST00000528948 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
CAPRIN1-206ENST00000528948 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-206ENST00000528948 IPO9Q96P70 1041 aaKnown RBP12.31□□□□□ -0.44
CAPRIN1-206ENST00000528948 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
CAPRIN1-206ENST00000528948 GLIPR1L2Q4G1C9 344 aa12.3□□□□□ -0.44
CAPRIN1-206ENST00000528948 ILDR1Q86SU0 546 aaPredicted RBP12.3□□□□□ -0.44
CAPRIN1-206ENST00000528948 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
CAPRIN1-206ENST00000528948 RUSC2Q8N2Y8 1516 aa12.3□□□□□ -0.44
CAPRIN1-206ENST00000528948 POTEFA5A3E0 1075 aa12.29□□□□□ -0.44
CAPRIN1-206ENST00000528948 DDX10Q13206 875 aaKnown RBP12.29□□□□□ -0.44
CAPRIN1-206ENST00000528948 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
CAPRIN1-206ENST00000528948 ITGAEP38570 1179 aa12.28□□□□□ -0.44
CAPRIN1-206ENST00000528948 MAMSTRQ6ZN01 415 aa12.28□□□□□ -0.44
CAPRIN1-206ENST00000528948 WASHC2AQ641Q2 1341 aa12.28□□□□□ -0.44
CAPRIN1-206ENST00000528948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
CAPRIN1-206ENST00000528948 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
CAPRIN1-206ENST00000528948 NLRP6P59044 892 aa12.26□□□□□ -0.45
CAPRIN1-206ENST00000528948 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
CAPRIN1-206ENST00000528948 PDCD7Q8N8D1 485 aaKnown RBP12.25□□□□□ -0.45
CAPRIN1-206ENST00000528948 L3MBTL3Q96JM7 780 aaPredicted RBP12.25□□□□□ -0.45
CAPRIN1-206ENST00000528948 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
CAPRIN1-206ENST00000528948 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
CAPRIN1-206ENST00000528948 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
CAPRIN1-206ENST00000528948 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
CAPRIN1-206ENST00000528948 WDR97A6NE52 1622 aa12.25□□□□□ -0.45
CAPRIN1-206ENST00000528948 FHAD1B1AJZ9 1412 aa12.24□□□□□ -0.45
CAPRIN1-206ENST00000528948 WASHC2CQ9Y4E1 1318 aa12.24□□□□□ -0.45
CAPRIN1-206ENST00000528948 RAPGEF2Q9Y4G8 1499 aa12.23□□□□□ -0.45
CAPRIN1-206ENST00000528948 TRIM52Q96A61 297 aa12.23□□□□□ -0.45
CAPRIN1-206ENST00000528948 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
CAPRIN1-206ENST00000528948 ZBED9Q6R2W3 1325 aa12.22□□□□□ -0.45
CAPRIN1-206ENST00000528948 PRXQ9BXM0 1461 aa12.21□□□□□ -0.45
CAPRIN1-206ENST00000528948 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
CAPRIN1-206ENST00000528948 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
CAPRIN1-206ENST00000528948 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
CAPRIN1-206ENST00000528948 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
CAPRIN1-206ENST00000528948 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
CAPRIN1-206ENST00000528948 SALL2Q9Y467 1007 aaPredicted RBP12.2□□□□□ -0.46
CAPRIN1-206ENST00000528948 G3V3G9 751 aa12.19□□□□□ -0.46
CAPRIN1-206ENST00000528948 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
CAPRIN1-206ENST00000528948 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
CAPRIN1-206ENST00000528948 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
CAPRIN1-206ENST00000528948 MFRPQ9BY79 579 aa12.18□□□□□ -0.46
CAPRIN1-206ENST00000528948 NBR1Q14596 966 aa12.17□□□□□ -0.46
CAPRIN1-206ENST00000528948 BIVM-ERCC5R4GMW8 1640 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms