RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 SCAPERQ9BY12 1400 aa17.74■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 PREX2Q70Z35 1606 aa17.74■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 CDC42BPBQ9Y5S2 1711 aa17.73■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 FRMPD1Q5SYB0 1578 aa17.71■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 CDC42BPAQ5VT25 1732 aa17.71■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 RICTORQ6R327 1708 aa17.71■□□□□ 0.43
TMX2-CTNND1-201ENST00000528395 POGZQ7Z3K3 1410 aa17.7■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 LRRC9Q6ZRR7 1453 aa17.69■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 APLP2Q06481 763 aa17.69■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 MAGI2Q86UL8 1455 aa17.69■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 ZMYM4Q5VZL5 1548 aa17.68■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 CFDP1Q9UEE9 299 aaPredicted RBP17.68■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 ZNF518AQ6AHZ1 1483 aa17.67■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 SUPT6HQ7KZ85 1726 aaKnown RBP17.67■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 ABCC1P33527 1531 aa17.65■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 KIAA1107Q9UPP5 1409 aa17.64■□□□□ 0.42
TMX2-CTNND1-201ENST00000528395 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 KDM4FA0A1W2PPD8 638 aa17.63■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 AFAP1Q8N556 730 aa17.63■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 ITSN2Q9NZM3 1697 aa17.63■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 ARHGEF12Q9NZN5 1544 aa17.62■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 KDM5CP41229 1560 aa17.62■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 ZFYVE16Q7Z3T8 1539 aa17.61■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 SAMD9LQ8IVG5 1584 aa17.61■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 TRAPPC8Q9Y2L5 1435 aa17.6■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 MLH3Q9UHC1 1453 aa17.59■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 YEATS2Q9ULM3 1422 aa17.58■□□□□ 0.41
TMX2-CTNND1-201ENST00000528395 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.49e-8■■■■□ 20.7
TMX2-CTNND1-201ENST00000528395 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 ATP10AO60312 1499 aa17.56■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 ZNF644Q9H582 1327 aaPredicted RBP17.55■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 HECW2Q9P2P5 1572 aa17.55■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 RSPH4AQ5TD94 716 aa17.55■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 ARID4BQ4LE39 1312 aaPredicted RBP17.54■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 MYT1LQ9UL68 1186 aa17.54■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 MIA2Q96PC5 1412 aa17.54■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 SPAG9O60271 1321 aaKnown RBP17.53■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 MBD5Q9P267 1494 aa17.53■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 MYOM3Q5VTT5 1437 aa17.53■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 C9orf84Q5VXU9 1444 aa17.53■□□□□ 0.4
TMX2-CTNND1-201ENST00000528395 CAMSAP2Q08AD1 1489 aa17.5■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 KIDINS220Q9ULH0 1771 aa17.49■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 RTEL1-TNFRSF6BF6WH68 1400 aa17.47■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 ADAMTSL3P82987 1691 aa17.47■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 ABCA6Q8N139 1617 aa17.47■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 CCDC141Q6ZP82 1450 aa17.46■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 ATP7AQ04656 1500 aa17.46■□□□□ 0.39
TMX2-CTNND1-201ENST00000528395 ARHGEF5Q12774 1597 aa17.45■□□□□ 0.38
TMX2-CTNND1-201ENST00000528395 INO80Q9ULG1 1556 aaPredicted RBP17.45■□□□□ 0.38
TMX2-CTNND1-201ENST00000528395 AGLP35573 1532 aa17.44■□□□□ 0.38
TMX2-CTNND1-201ENST00000528395 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
TMX2-CTNND1-201ENST00000528395 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
TMX2-CTNND1-201ENST00000528395 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
TMX2-CTNND1-201ENST00000528395 FGD6Q6ZV73 1430 aa17.42■□□□□ 0.38
TMX2-CTNND1-201ENST00000528395 A2MP01023 1474 aa17.39■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 MLECQ14165 292 aa17.39■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 MADDQ8WXG6 1647 aa17.39■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 PTPRMP28827 1452 aa17.38■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 ADGBQ8N7X0 1667 aa17.37■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 PLXNC1O60486 1568 aa17.36■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 DHX29Q7Z478 1369 aaKnown RBP17.36■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
TMX2-CTNND1-201ENST00000528395 ABCC5O15440 1437 aa17.33■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 FER1L4A9Z1Z3 1794 aa17.33■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 SHANK2Q9UPX8 1470 aa17.32■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 DAPK1P53355 1430 aa17.3■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 FAM50AQ14320 339 aaKnown RBP17.29■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 CROCC2H7BZ55 1655 aa17.27■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 KIF3BO15066 747 aa17.27■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 GGT6Q6P531 493 aa17.27■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.36
TMX2-CTNND1-201ENST00000528395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 KIF15Q9NS87 1388 aa17.23■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 FAM135AQ9P2D6 1515 aa17.22■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 RRP7BPQ9NSQ0 103 aa17.22■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 MROH2AA6NES4 1674 aa17.21■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 ADGRL2O95490 1459 aa17.21■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 CEBPAP49715 358 aaPredicted RBP17.21■□□□□ 0.35
TMX2-CTNND1-201ENST00000528395 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms