RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 CASKIN1Q8WXD9 1431 aa18.12■□□□□ 0.49
NR1H3-230ENST00000527949 CERKQ8TCT0 537 aa18.11■□□□□ 0.49
NR1H3-230ENST00000527949 TTC37Q6PGP7 1564 aa18.1■□□□□ 0.49
NR1H3-230ENST00000527949 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
NR1H3-230ENST00000527949 PLCH2O75038 1416 aa18.09■□□□□ 0.49
NR1H3-230ENST00000527949 TROQ12816 1431 aaPredicted RBP18.09■□□□□ 0.49
NR1H3-230ENST00000527949 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
NR1H3-230ENST00000527949 YEATS2Q9ULM3 1422 aa18.08■□□□□ 0.49
NR1H3-230ENST00000527949 CLIP1P30622 1438 aa18.07■□□□□ 0.48
NR1H3-230ENST00000527949 SCAPERQ9BY12 1400 aa18.07■□□□□ 0.48
NR1H3-230ENST00000527949 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
NR1H3-230ENST00000527949 ATP10AO60312 1499 aa18.07■□□□□ 0.48
NR1H3-230ENST00000527949 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
NR1H3-230ENST00000527949 MLECQ14165 292 aa18.06■□□□□ 0.48
NR1H3-230ENST00000527949 EFCAB2Q5VUJ9 269 aa18.06■□□□□ 0.48
NR1H3-230ENST00000527949 LRRIQ1Q96JM4 1722 aa18.06■□□□□ 0.48
NR1H3-230ENST00000527949 C9orf84Q5VXU9 1444 aa18.05■□□□□ 0.48
NR1H3-230ENST00000527949 KIF14Q15058 1648 aa18.05■□□□□ 0.48
NR1H3-230ENST00000527949 ATP1B4Q9UN42 357 aaPredicted RBP18.03■□□□□ 0.48
NR1H3-230ENST00000527949 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
NR1H3-230ENST00000527949 ARHGEF12Q9NZN5 1544 aa18.03■□□□□ 0.48
NR1H3-230ENST00000527949 ZNF518AQ6AHZ1 1483 aa18■□□□□ 0.47
NR1H3-230ENST00000527949 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
NR1H3-230ENST00000527949 UHRF1BP1Q6BDS2 1440 aa17.97■□□□□ 0.47
NR1H3-230ENST00000527949 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
NR1H3-230ENST00000527949 SIGLEC1Q9BZZ2 1709 aa17.95■□□□□ 0.46
NR1H3-230ENST00000527949 ESF1Q9H501 851 aaKnown RBP17.93■□□□□ 0.46
NR1H3-230ENST00000527949 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
NR1H3-230ENST00000527949 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
NR1H3-230ENST00000527949 MYT1LQ9UL68 1186 aa17.92■□□□□ 0.46
NR1H3-230ENST00000527949 ARHGAP5Q13017 1502 aa17.92■□□□□ 0.46
NR1H3-230ENST00000527949 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
NR1H3-230ENST00000527949 CDC42BPBQ9Y5S2 1711 aa17.91■□□□□ 0.46
NR1H3-230ENST00000527949 KDM5CP41229 1560 aa17.91■□□□□ 0.46
NR1H3-230ENST00000527949 REREQ9P2R6 1566 aa17.91■□□□□ 0.46
NR1H3-230ENST00000527949 PTPRTO14522 1441 aa17.89■□□□□ 0.46
NR1H3-230ENST00000527949 AFAP1Q8N556 730 aa17.89■□□□□ 0.45
NR1H3-230ENST00000527949 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
NR1H3-230ENST00000527949 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
NR1H3-230ENST00000527949 CDC42BPAQ5VT25 1732 aa17.86■□□□□ 0.45
NR1H3-230ENST00000527949 SOCS7O14512 581 aa17.86■□□□□ 0.45
NR1H3-230ENST00000527949 CNTLNQ9NXG0 1405 aa17.86■□□□□ 0.45
NR1H3-230ENST00000527949 ABCC1P33527 1531 aa17.85■□□□□ 0.45
NR1H3-230ENST00000527949 AGLP35573 1532 aa17.85■□□□□ 0.45
NR1H3-230ENST00000527949 TRAPPC8Q9Y2L5 1435 aa17.85■□□□□ 0.45
NR1H3-230ENST00000527949 IQSEC2Q5JU85 1478 aa17.83■□□□□ 0.45
NR1H3-230ENST00000527949 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.44
NR1H3-230ENST00000527949 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
NR1H3-230ENST00000527949 SETD1BQ9UPS6 1966 aaKnown RBP17.82■□□□□ 0.44
NR1H3-230ENST00000527949 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
NR1H3-230ENST00000527949 EHBP1L1Q8N3D4 1523 aa17.81■□□□□ 0.44
NR1H3-230ENST00000527949 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
NR1H3-230ENST00000527949 ITSN2Q9NZM3 1697 aa17.8■□□□□ 0.44
NR1H3-230ENST00000527949 PLEKHH2Q8IVE3 1493 aa17.8■□□□□ 0.44
NR1H3-230ENST00000527949 KIAA1107Q9UPP5 1409 aa17.8■□□□□ 0.44
NR1H3-230ENST00000527949 NPATQ14207 1427 aa17.77■□□□□ 0.44
NR1H3-230ENST00000527949 CCNB3Q8WWL7 1395 aa17.77■□□□□ 0.43
NR1H3-230ENST00000527949 SAMD9LQ8IVG5 1584 aa17.76■□□□□ 0.43
NR1H3-230ENST00000527949 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
NR1H3-230ENST00000527949 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
NR1H3-230ENST00000527949 ILDR2Q71H61 639 aa17.76■□□□□ 0.43
NR1H3-230ENST00000527949 ABCA6Q8N139 1617 aa17.76■□□□□ 0.43
NR1H3-230ENST00000527949 C3P01024 1663 aa17.75■□□□□ 0.43
NR1H3-230ENST00000527949 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
NR1H3-230ENST00000527949 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
NR1H3-230ENST00000527949 TIAM1Q13009 1591 aa17.73■□□□□ 0.43
NR1H3-230ENST00000527949 LTBP4Q8N2S1 1624 aa17.72■□□□□ 0.43
NR1H3-230ENST00000527949 KIDINS220Q9ULH0 1771 aa17.72■□□□□ 0.43
NR1H3-230ENST00000527949 SPATA31D1Q6ZQQ2 1576 aa17.72■□□□□ 0.43
NR1H3-230ENST00000527949 LOC105371045A0A1W2PR82 267 aa17.72■□□□□ 0.43
NR1H3-230ENST00000527949 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
NR1H3-230ENST00000527949 PKD2Q13563 968 aa17.7■□□□□ 0.42
NR1H3-230ENST00000527949 ZMYM3Q14202 1370 aa17.69■□□□□ 0.42
NR1H3-230ENST00000527949 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
NR1H3-230ENST00000527949 SPAG9O60271 1321 aaKnown RBP17.69■□□□□ 0.42
NR1H3-230ENST00000527949 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
NR1H3-230ENST00000527949 MROH2AA6NES4 1674 aa17.67■□□□□ 0.42
NR1H3-230ENST00000527949 ZNF777Q9ULD5 760 aaPredicted RBP17.67■□□□□ 0.42
NR1H3-230ENST00000527949 INO80Q9ULG1 1556 aaPredicted RBP17.66■□□□□ 0.42
NR1H3-230ENST00000527949 CAMSAP1Q5T5Y3 1602 aa17.66■□□□□ 0.42
NR1H3-230ENST00000527949 PLA2R1Q13018 1463 aa17.66■□□□□ 0.42
NR1H3-230ENST00000527949 NCOA2Q15596 1464 aa17.66■□□□□ 0.42
NR1H3-230ENST00000527949 LRRC9Q6ZRR7 1453 aa17.65■□□□□ 0.42
NR1H3-230ENST00000527949 MBD5Q9P267 1494 aa17.65■□□□□ 0.42
NR1H3-230ENST00000527949 ATP7AQ04656 1500 aa17.65■□□□□ 0.42
NR1H3-230ENST00000527949 HNRNPMP52272 730 aaKnown RBP eCLIP17.64■□□□□ 0.41
NR1H3-230ENST00000527949 RTEL1-TNFRSF6BF6WH68 1400 aa17.64■□□□□ 0.41
NR1H3-230ENST00000527949 RSPH4AQ5TD94 716 aa17.63■□□□□ 0.41
NR1H3-230ENST00000527949 UBAP1LF5GYI3 381 aa17.62■□□□□ 0.41
NR1H3-230ENST00000527949 PLXNC1O60486 1568 aa17.62■□□□□ 0.41
NR1H3-230ENST00000527949 NCKAP5LQ9HCH0 1330 aa17.61■□□□□ 0.41
NR1H3-230ENST00000527949 A2MP01023 1474 aa17.6■□□□□ 0.41
NR1H3-230ENST00000527949 ZNF335Q9H4Z2 1342 aaPredicted RBP17.59■□□□□ 0.41
NR1H3-230ENST00000527949 ADGBQ8N7X0 1667 aa17.58■□□□□ 0.41
NR1H3-230ENST00000527949 TCOF1Q13428 1488 aaKnown RBP17.58■□□□□ 0.41
NR1H3-230ENST00000527949 PTPRKQ15262 1439 aa17.58■□□□□ 0.41
NR1H3-230ENST00000527949 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.4
NR1H3-230ENST00000527949 ARHGEF5Q12774 1597 aa17.57■□□□□ 0.4
NR1H3-230ENST00000527949 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
NR1H3-230ENST00000527949 CCDC141Q6ZP82 1450 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms