RNA–Protein interactions for RNA: ENST00000527901.1

PDE4DIP-224, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2

Gene PDE4DIP, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-224ENST00000527901 CCDC88BA6NC98 1476 aa9.32□□□□□ -0.92
PDE4DIP-224ENST00000527901 PTPRGP23470 1445 aa9.31□□□□□ -0.92
PDE4DIP-224ENST00000527901 ATXN8OSP0DMR3 200 aa9.31□□□□□ -0.92
PDE4DIP-224ENST00000527901 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
PDE4DIP-224ENST00000527901 TOM1O60784 492 aa9.3□□□□□ -0.92
PDE4DIP-224ENST00000527901 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
PDE4DIP-224ENST00000527901 SETD1AO15047 1707 aaKnown RBP9.3□□□□□ -0.92
PDE4DIP-224ENST00000527901 ZNF335Q9H4Z2 1342 aaPredicted RBP9.3□□□□□ -0.92
PDE4DIP-224ENST00000527901 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
PDE4DIP-224ENST00000527901 KDM5BQ9UGL1 1544 aa9.29□□□□□ -0.92
PDE4DIP-224ENST00000527901 CUL7Q14999 1698 aa9.29□□□□□ -0.92
PDE4DIP-224ENST00000527901 TTC37Q6PGP7 1564 aa9.28□□□□□ -0.92
PDE4DIP-224ENST00000527901 RUSC2Q8N2Y8 1516 aa9.27□□□□□ -0.93
PDE4DIP-224ENST00000527901 CUX1P39880 1505 aa9.26□□□□□ -0.93
PDE4DIP-224ENST00000527901 PITPNM1O00562 1244 aa9.26□□□□□ -0.93
PDE4DIP-224ENST00000527901 NCOA1Q15788 1441 aa9.24□□□□□ -0.93
PDE4DIP-224ENST00000527901 SP7Q8TDD2 431 aaPredicted RBP9.24□□□□□ -0.93
PDE4DIP-224ENST00000527901 SETD1BQ9UPS6 1966 aaKnown RBP9.24□□□□□ -0.93
PDE4DIP-224ENST00000527901 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
PDE4DIP-224ENST00000527901 UHRF1BP1Q6BDS2 1440 aa9.23□□□□□ -0.93
PDE4DIP-224ENST00000527901 RAPGEF3O95398 923 aa9.23□□□□□ -0.93
PDE4DIP-224ENST00000527901 ALKQ9UM73 1620 aa9.22□□□□□ -0.93
PDE4DIP-224ENST00000527901 SLC34A2O95436 690 aa9.21□□□□□ -0.94
PDE4DIP-224ENST00000527901 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.94
PDE4DIP-224ENST00000527901 RBM33Q96EV2 1170 aaKnown RBP9.21□□□□□ -0.94
PDE4DIP-224ENST00000527901 UACAQ9BZF9 1416 aa9.21□□□□□ -0.94
PDE4DIP-224ENST00000527901 WDR7Q9Y4E6 1490 aa9.21□□□□□ -0.94
PDE4DIP-224ENST00000527901 CEBPAP49715 358 aaPredicted RBP9.2□□□□□ -0.94
PDE4DIP-224ENST00000527901 POGZQ7Z3K3 1410 aa9.2□□□□□ -0.94
PDE4DIP-224ENST00000527901 TNIKQ9UKE5 1360 aa9.19□□□□□ -0.94
PDE4DIP-224ENST00000527901 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
PDE4DIP-224ENST00000527901 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
PDE4DIP-224ENST00000527901 SPDYE2Q495Y8 402 aa9.17□□□□□ -0.94
PDE4DIP-224ENST00000527901 ERICH3Q5RHP9 1530 aa9.16□□□□□ -0.94
PDE4DIP-224ENST00000527901 PCDH10Q9P2E7 1040 aa9.16□□□□□ -0.94
PDE4DIP-224ENST00000527901 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
PDE4DIP-224ENST00000527901 ZCCHC11Q5TAX3 1644 aaKnown RBP9.15□□□□□ -0.94
PDE4DIP-224ENST00000527901 FRMPD1Q5SYB0 1578 aa9.15□□□□□ -0.95
PDE4DIP-224ENST00000527901 SETBP1Q9Y6X0 1596 aa9.15□□□□□ -0.95
PDE4DIP-224ENST00000527901 SIGLEC1Q9BZZ2 1709 aa9.14□□□□□ -0.95
PDE4DIP-224ENST00000527901 ARHGEF12Q9NZN5 1544 aa9.14□□□□□ -0.95
PDE4DIP-224ENST00000527901 FER1L4A9Z1Z3 1794 aa9.14□□□□□ -0.95
PDE4DIP-224ENST00000527901 FANCAO15360 1455 aa9.14□□□□□ -0.95
PDE4DIP-224ENST00000527901 PTPRKQ15262 1439 aa9.14□□□□□ -0.95
PDE4DIP-224ENST00000527901 ZRANB1Q9UGI0 708 aa9.13□□□□□ -0.95
PDE4DIP-224ENST00000527901 ARHGEF40Q8TER5 1519 aa9.13□□□□□ -0.95
PDE4DIP-224ENST00000527901 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
PDE4DIP-224ENST00000527901 KIAA0556O60303 1618 aa9.12□□□□□ -0.95
PDE4DIP-224ENST00000527901 NCKAP5LQ9HCH0 1330 aa9.1□□□□□ -0.95
PDE4DIP-224ENST00000527901 HAX1O00165 279 aa9.1□□□□□ -0.95
PDE4DIP-224ENST00000527901 KCNH8Q96L42 1107 aa9.09□□□□□ -0.95
PDE4DIP-224ENST00000527901 TTBK1Q5TCY1 1321 aaPredicted RBP9.08□□□□□ -0.96
PDE4DIP-224ENST00000527901 MLECQ14165 292 aa9.08□□□□□ -0.96
PDE4DIP-224ENST00000527901 CPS1P31327 1500 aa9.08□□□□□ -0.96
PDE4DIP-224ENST00000527901 NEO1Q92859 1461 aa9.08□□□□□ -0.96
PDE4DIP-224ENST00000527901 PKD2Q13563 968 aa9.07□□□□□ -0.96
PDE4DIP-224ENST00000527901 AKNAQ7Z591 1439 aa9.06□□□□□ -0.96
PDE4DIP-224ENST00000527901 CAMSAP1Q5T5Y3 1602 aa9.06□□□□□ -0.96
PDE4DIP-224ENST00000527901 YY1P25490 414 aa9.06□□□□□ -0.96
PDE4DIP-224ENST00000527901 SSUH2Q9Y2M2 353 aa9.06□□□□□ -0.96
PDE4DIP-224ENST00000527901 CARMIL2Q6F5E8 1435 aa9.05□□□□□ -0.96
PDE4DIP-224ENST00000527901 TRAPPC8Q9Y2L5 1435 aa9.05□□□□□ -0.96
PDE4DIP-224ENST00000527901 FHOD3Q2V2M9 1422 aa9.04□□□□□ -0.96
PDE4DIP-224ENST00000527901 TCOF1Q13428 1488 aaKnown RBP9.03□□□□□ -0.96
PDE4DIP-224ENST00000527901 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
PDE4DIP-224ENST00000527901 EVX2Q03828 476 aa9.03□□□□□ -0.96
PDE4DIP-224ENST00000527901 TRIM52Q96A61 297 aa9.03□□□□□ -0.96
PDE4DIP-224ENST00000527901 CDK12Q9NYV4 1490 aaPredicted RBP9.02□□□□□ -0.96
PDE4DIP-224ENST00000527901 LRP5O75197 1615 aa9.02□□□□□ -0.96
PDE4DIP-224ENST00000527901 SPDYE1Q8NFV5 336 aaPredicted RBP9.02□□□□□ -0.97
PDE4DIP-224ENST00000527901 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
PDE4DIP-224ENST00000527901 ZNF692Q9BU19 519 aaPredicted RBP9.01□□□□□ -0.97
PDE4DIP-224ENST00000527901 SHANK2Q9UPX8 1470 aa9.01□□□□□ -0.97
PDE4DIP-224ENST00000527901 PRKAR2AP13861 404 aaKnown RBP9□□□□□ -0.97
PDE4DIP-224ENST00000527901 CLEC11AQ9Y240 323 aa9□□□□□ -0.97
PDE4DIP-224ENST00000527901 RAPGEF2Q9Y4G8 1499 aa9□□□□□ -0.97
PDE4DIP-224ENST00000527901 LRRC7Q96NW7 1537 aa9□□□□□ -0.97
PDE4DIP-224ENST00000527901 WRNQ14191 1432 aaPredicted RBP eCLIP8.99□□□□□ -0.97
PDE4DIP-224ENST00000527901 MAGI2Q86UL8 1455 aa8.98□□□□□ -0.97
PDE4DIP-224ENST00000527901 RICTORQ6R327 1708 aa8.97□□□□□ -0.97
PDE4DIP-224ENST00000527901 ZMYM4Q5VZL5 1548 aa8.97□□□□□ -0.97
PDE4DIP-224ENST00000527901 DENND4BO75064 1496 aaPredicted RBP8.96□□□□□ -0.97
PDE4DIP-224ENST00000527901 RXRBP28702 533 aa8.96□□□□□ -0.98
PDE4DIP-224ENST00000527901 ZNF772Q68DY9 489 aaPredicted RBP8.96□□□□□ -0.98
PDE4DIP-224ENST00000527901 DISP1Q96F81 1524 aa8.95□□□□□ -0.98
PDE4DIP-224ENST00000527901 C3P01024 1663 aa8.95□□□□□ -0.98
PDE4DIP-224ENST00000527901 CEP350Q5VT06 3117 aa8.95□□□□□ -0.98
PDE4DIP-224ENST00000527901 EFCAB5A4FU69 1503 aa8.95□□□□□ -0.98
PDE4DIP-224ENST00000527901 ZFYVE16Q7Z3T8 1539 aa8.95□□□□□ -0.98
PDE4DIP-224ENST00000527901 ABCA9Q8IUA7 1624 aa8.94□□□□□ -0.98
PDE4DIP-224ENST00000527901 C1QTNF8P60827 252 aa8.93□□□□□ -0.98
PDE4DIP-224ENST00000527901 FAM135BQ49AJ0 1406 aa8.93□□□□□ -0.98
PDE4DIP-224ENST00000527901 C19orf67A6NJJ6 358 aa8.92□□□□□ -0.98
PDE4DIP-224ENST00000527901 ATP10AO60312 1499 aa8.91□□□□□ -0.98
PDE4DIP-224ENST00000527901 VWDEQ8N2E2 1590 aa8.9□□□□□ -0.99
PDE4DIP-224ENST00000527901 NPATQ14207 1427 aa8.89□□□□□ -0.99
PDE4DIP-224ENST00000527901 RAPGEF6Q8TEU7 1601 aa8.89□□□□□ -0.99
PDE4DIP-224ENST00000527901 BIVM-ERCC5R4GMW8 1640 aa8.89□□□□□ -0.99
PDE4DIP-224ENST00000527901 C9orf84Q5VXU9 1444 aa8.88□□□□□ -0.99
PDE4DIP-224ENST00000527901 CHADLQ6NUI6 762 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms