RNA–Protein interactions for RNA: ENST00000527528.1

AP003066.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003066.1, Length 1,647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003066.1-201ENST00000527528 ABCA9Q8IUA7 1624 aa12.36□□□□□ -0.43
AP003066.1-201ENST00000527528 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
AP003066.1-201ENST00000527528 EEA1Q15075 1411 aa12.36□□□□□ -0.43
AP003066.1-201ENST00000527528 RAPGEF6Q8TEU7 1601 aa12.36□□□□□ -0.43
AP003066.1-201ENST00000527528 KIF21BO75037 1637 aa12.35□□□□□ -0.43
AP003066.1-201ENST00000527528 NEO1Q92859 1461 aa12.34□□□□□ -0.43
AP003066.1-201ENST00000527528 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
AP003066.1-201ENST00000527528 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.43
AP003066.1-201ENST00000527528 RAPGEF3O95398 923 aa12.32□□□□□ -0.44
AP003066.1-201ENST00000527528 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
AP003066.1-201ENST00000527528 POLA2Q14181 598 aa12.31□□□□□ -0.44
AP003066.1-201ENST00000527528 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
AP003066.1-201ENST00000527528 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
AP003066.1-201ENST00000527528 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
AP003066.1-201ENST00000527528 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
AP003066.1-201ENST00000527528 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.44
AP003066.1-201ENST00000527528 PTPRMP28827 1452 aa12.27□□□□□ -0.45
AP003066.1-201ENST00000527528 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
AP003066.1-201ENST00000527528 DENND4BO75064 1496 aaPredicted RBP12.26□□□□□ -0.45
AP003066.1-201ENST00000527528 ADAMTSL3P82987 1691 aa12.26□□□□□ -0.45
AP003066.1-201ENST00000527528 CFAP74Q9C0B2 1584 aa12.25□□□□□ -0.45
AP003066.1-201ENST00000527528 AKNAQ7Z591 1439 aa12.24□□□□□ -0.45
AP003066.1-201ENST00000527528 FANCAO15360 1455 aa12.24□□□□□ -0.45
AP003066.1-201ENST00000527528 FRMPD1Q5SYB0 1578 aa12.23□□□□□ -0.45
AP003066.1-201ENST00000527528 POGZQ7Z3K3 1410 aa12.22□□□□□ -0.45
AP003066.1-201ENST00000527528 BCORL1Q5H9F3 1711 aa12.22□□□□□ -0.45
AP003066.1-201ENST00000527528 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.45
AP003066.1-201ENST00000527528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.21□□□□□ -0.46
AP003066.1-201ENST00000527528 MADDQ8WXG6 1647 aa12.2□□□□□ -0.46
AP003066.1-201ENST00000527528 UBTFP17480 764 aaKnown RBP12.19□□□□□ -0.46
AP003066.1-201ENST00000527528 RICTORQ6R327 1708 aa12.19□□□□□ -0.46
AP003066.1-201ENST00000527528 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
AP003066.1-201ENST00000527528 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
AP003066.1-201ENST00000527528 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
AP003066.1-201ENST00000527528 ATP1B4Q9UN42 357 aaPredicted RBP12.19□□□□□ -0.46
AP003066.1-201ENST00000527528 PCF11O94913 1555 aaKnown RBP12.18□□□□□ -0.46
AP003066.1-201ENST00000527528 MAGI2Q86UL8 1455 aa12.18□□□□□ -0.46
AP003066.1-201ENST00000527528 CDK11AQ9UQ88 783 aaPredicted RBP12.18□□□□□ -0.46
AP003066.1-201ENST00000527528 TTC37Q6PGP7 1564 aa12.18□□□□□ -0.46
AP003066.1-201ENST00000527528 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
AP003066.1-201ENST00000527528 ZFYVE16Q7Z3T8 1539 aa12.18□□□□□ -0.46
AP003066.1-201ENST00000527528 FMN1Q68DA7 1419 aa12.17□□□□□ -0.46
AP003066.1-201ENST00000527528 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
AP003066.1-201ENST00000527528 RIMS1Q86UR5 1692 aaKnown RBP12.16□□□□□ -0.46
AP003066.1-201ENST00000527528 PLCH2O75038 1416 aa12.16□□□□□ -0.46
AP003066.1-201ENST00000527528 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
AP003066.1-201ENST00000527528 SCAPERQ9BY12 1400 aa12.15□□□□□ -0.46
AP003066.1-201ENST00000527528 LMTK3Q96Q04 1460 aa12.15□□□□□ -0.46
AP003066.1-201ENST00000527528 HECW1Q76N89 1606 aa12.15□□□□□ -0.47
AP003066.1-201ENST00000527528 EFCAB2Q5VUJ9 269 aa12.15□□□□□ -0.47
AP003066.1-201ENST00000527528 YEATS2Q9ULM3 1422 aa12.14□□□□□ -0.47
AP003066.1-201ENST00000527528 MLECQ14165 292 aa12.13□□□□□ -0.47
AP003066.1-201ENST00000527528 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
AP003066.1-201ENST00000527528 CLIP1P30622 1438 aa12.11□□□□□ -0.47
AP003066.1-201ENST00000527528 ATP10AO60312 1499 aa12.11□□□□□ -0.47
AP003066.1-201ENST00000527528 ARHGAP35Q9NRY4 1499 aa12.1□□□□□ -0.47
AP003066.1-201ENST00000527528 HSPA2P54652 639 aa12.1□□□□□ -0.47
AP003066.1-201ENST00000527528 DAXXQ9UER7 740 aaPredicted RBP12.1□□□□□ -0.47
AP003066.1-201ENST00000527528 MYO5CQ9NQX4 1742 aa12.1□□□□□ -0.47
AP003066.1-201ENST00000527528 C9orf84Q5VXU9 1444 aa12.1□□□□□ -0.47
AP003066.1-201ENST00000527528 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
AP003066.1-201ENST00000527528 KIF14Q15058 1648 aa12.09□□□□□ -0.47
AP003066.1-201ENST00000527528 TROQ12816 1431 aaPredicted RBP12.09□□□□□ -0.47
AP003066.1-201ENST00000527528 ZNF518AQ6AHZ1 1483 aa12.08□□□□□ -0.48
AP003066.1-201ENST00000527528 ARHGAP5Q13017 1502 aa12.08□□□□□ -0.48
AP003066.1-201ENST00000527528 FER1L4A9Z1Z3 1794 aa12.07□□□□□ -0.48
AP003066.1-201ENST00000527528 SIGLEC1Q9BZZ2 1709 aa12.06□□□□□ -0.48
AP003066.1-201ENST00000527528 ARHGEF12Q9NZN5 1544 aa12.05□□□□□ -0.48
AP003066.1-201ENST00000527528 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
AP003066.1-201ENST00000527528 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
AP003066.1-201ENST00000527528 ESF1Q9H501 851 aaKnown RBP12.03□□□□□ -0.48
AP003066.1-201ENST00000527528 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
AP003066.1-201ENST00000527528 KDM5CP41229 1560 aa12.02□□□□□ -0.48
AP003066.1-201ENST00000527528 CERKQ8TCT0 537 aa12.01□□□□□ -0.49
AP003066.1-201ENST00000527528 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
AP003066.1-201ENST00000527528 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
AP003066.1-201ENST00000527528 CASKIN1Q8WXD9 1431 aa12□□□□□ -0.49
AP003066.1-201ENST00000527528 MLH3Q9UHC1 1453 aa12□□□□□ -0.49
AP003066.1-201ENST00000527528 UHRF1BP1Q6BDS2 1440 aa12□□□□□ -0.49
AP003066.1-201ENST00000527528 REREQ9P2R6 1566 aa11.99□□□□□ -0.49
AP003066.1-201ENST00000527528 DIP2CQ9Y2E4 1556 aa11.99□□□□□ -0.49
AP003066.1-201ENST00000527528 PREX2Q70Z35 1606 aa11.97□□□□□ -0.49
AP003066.1-201ENST00000527528 ABCC1P33527 1531 aa11.97□□□□□ -0.49
AP003066.1-201ENST00000527528 LRRIQ1Q96JM4 1722 aa11.97□□□□□ -0.49
AP003066.1-201ENST00000527528 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.49
AP003066.1-201ENST00000527528 AGLP35573 1532 aa11.96□□□□□ -0.5
AP003066.1-201ENST00000527528 TRAPPC8Q9Y2L5 1435 aa11.96□□□□□ -0.5
AP003066.1-201ENST00000527528 ABCA6Q8N139 1617 aa11.96□□□□□ -0.5
AP003066.1-201ENST00000527528 FYCO1Q9BQS8 1478 aa11.95□□□□□ -0.5
AP003066.1-201ENST00000527528 ZNF777Q9ULD5 760 aaPredicted RBP11.95□□□□□ -0.5
AP003066.1-201ENST00000527528 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
AP003066.1-201ENST00000527528 CNTLNQ9NXG0 1405 aa11.94□□□□□ -0.5
AP003066.1-201ENST00000527528 SETD1BQ9UPS6 1966 aaKnown RBP11.93□□□□□ -0.5
AP003066.1-201ENST00000527528 SPAG9O60271 1321 aaKnown RBP11.92□□□□□ -0.5
AP003066.1-201ENST00000527528 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
AP003066.1-201ENST00000527528 C3P01024 1663 aa11.91□□□□□ -0.5
AP003066.1-201ENST00000527528 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
AP003066.1-201ENST00000527528 PTPRTO14522 1441 aa11.9□□□□□ -0.5
AP003066.1-201ENST00000527528 KIDINS220Q9ULH0 1771 aa11.9□□□□□ -0.5
AP003066.1-201ENST00000527528 PLEKHH2Q8IVE3 1493 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms