RNA–Protein interactions for RNA: ENST00000526836.1

PDZD3-205, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-205ENST00000526836 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
PDZD3-205ENST00000526836 HNRNPMP52272 730 aaKnown RBP eCLIP17.84■□□□□ 0.45
PDZD3-205ENST00000526836 DENND4BO75064 1496 aaPredicted RBP17.83■□□□□ 0.45
PDZD3-205ENST00000526836 LRRC9Q6ZRR7 1453 aa17.82■□□□□ 0.44
PDZD3-205ENST00000526836 ARHGAP5Q13017 1502 aa17.81■□□□□ 0.44
PDZD3-205ENST00000526836 MAP3K1Q13233 1512 aa17.8■□□□□ 0.44
PDZD3-205ENST00000526836 ADGRL1O94910 1474 aa17.8■□□□□ 0.44
PDZD3-205ENST00000526836 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
PDZD3-205ENST00000526836 PPARGC1BQ86YN6 1023 aaKnown RBP17.78■□□□□ 0.44
PDZD3-205ENST00000526836 MYT1LQ9UL68 1186 aa17.78■□□□□ 0.44
PDZD3-205ENST00000526836 NCOA2Q15596 1464 aa17.77■□□□□ 0.44
PDZD3-205ENST00000526836 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.44
PDZD3-205ENST00000526836 EHBP1L1Q8N3D4 1523 aa17.76■□□□□ 0.43
PDZD3-205ENST00000526836 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
PDZD3-205ENST00000526836 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
PDZD3-205ENST00000526836 POGZQ7Z3K3 1410 aa17.72■□□□□ 0.43
PDZD3-205ENST00000526836 ARID4BQ4LE39 1312 aaPredicted RBP17.72■□□□□ 0.43
PDZD3-205ENST00000526836 MYO5CQ9NQX4 1742 aa17.71■□□□□ 0.43
PDZD3-205ENST00000526836 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
PDZD3-205ENST00000526836 YEATS2Q9ULM3 1422 aa17.7■□□□□ 0.42
PDZD3-205ENST00000526836 KIAA1107Q9UPP5 1409 aa17.7■□□□□ 0.42
PDZD3-205ENST00000526836 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
PDZD3-205ENST00000526836 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
PDZD3-205ENST00000526836 SPAG9O60271 1321 aaKnown RBP17.69■□□□□ 0.42
PDZD3-205ENST00000526836 RSPH4AQ5TD94 716 aa17.68■□□□□ 0.42
PDZD3-205ENST00000526836 FRMPD1Q5SYB0 1578 aa17.67■□□□□ 0.42
PDZD3-205ENST00000526836 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
PDZD3-205ENST00000526836 CDC42BPAQ5VT25 1732 aa17.67■□□□□ 0.42
PDZD3-205ENST00000526836 ZNF518AQ6AHZ1 1483 aa17.66■□□□□ 0.42
PDZD3-205ENST00000526836 MAGI2Q86UL8 1455 aa17.66■□□□□ 0.42
PDZD3-205ENST00000526836 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
PDZD3-205ENST00000526836 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
PDZD3-205ENST00000526836 MBD5Q9P267 1494 aa17.64■□□□□ 0.41
PDZD3-205ENST00000526836 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
PDZD3-205ENST00000526836 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
PDZD3-205ENST00000526836 SAMD9LQ8IVG5 1584 aa17.64■□□□□ 0.41
PDZD3-205ENST00000526836 MYOM3Q5VTT5 1437 aa17.64■□□□□ 0.41
PDZD3-205ENST00000526836 MLECQ14165 292 aa17.63■□□□□ 0.41
PDZD3-205ENST00000526836 ATP10AO60312 1499 aa17.63■□□□□ 0.41
PDZD3-205ENST00000526836 ABCC1P33527 1531 aa17.62■□□□□ 0.41
PDZD3-205ENST00000526836 RICTORQ6R327 1708 aa17.62■□□□□ 0.41
PDZD3-205ENST00000526836 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
PDZD3-205ENST00000526836 MIA2Q96PC5 1412 aa17.61■□□□□ 0.41
PDZD3-205ENST00000526836 ZMYM4Q5VZL5 1548 aa17.6■□□□□ 0.41
PDZD3-205ENST00000526836 SYCP2Q9BX26 1530 aa17.6■□□□□ 0.41
PDZD3-205ENST00000526836 ZFYVE16Q7Z3T8 1539 aa17.58■□□□□ 0.41
PDZD3-205ENST00000526836 FAM50AQ14320 339 aaKnown RBP17.58■□□□□ 0.4
PDZD3-205ENST00000526836 CAMSAP2Q08AD1 1489 aa17.56■□□□□ 0.4
PDZD3-205ENST00000526836 KDM5CP41229 1560 aa17.56■□□□□ 0.4
PDZD3-205ENST00000526836 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
PDZD3-205ENST00000526836 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
PDZD3-205ENST00000526836 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
PDZD3-205ENST00000526836 C9orf84Q5VXU9 1444 aa17.53■□□□□ 0.4
PDZD3-205ENST00000526836 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.39
PDZD3-205ENST00000526836 ARHGEF40Q8TER5 1519 aa17.51■□□□□ 0.39
PDZD3-205ENST00000526836 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
PDZD3-205ENST00000526836 GGT6Q6P531 493 aa17.5■□□□□ 0.39
PDZD3-205ENST00000526836 RRP7BPQ9NSQ0 103 aa17.5■□□□□ 0.39
PDZD3-205ENST00000526836 ABCC5O15440 1437 aa17.49■□□□□ 0.39
PDZD3-205ENST00000526836 PLPPR3Q6T4P5 718 aa17.49■□□□□ 0.39
PDZD3-205ENST00000526836 DHX29Q7Z478 1369 aaKnown RBP17.49■□□□□ 0.39
PDZD3-205ENST00000526836 HECW2Q9P2P5 1572 aa17.49■□□□□ 0.39
PDZD3-205ENST00000526836 KIF3BO15066 747 aa17.48■□□□□ 0.39
PDZD3-205ENST00000526836 KIDINS220Q9ULH0 1771 aa17.47■□□□□ 0.39
PDZD3-205ENST00000526836 DIP2CQ9Y2E4 1556 aa17.46■□□□□ 0.39
PDZD3-205ENST00000526836 A2MP01023 1474 aa17.46■□□□□ 0.39
PDZD3-205ENST00000526836 TCOF1Q13428 1488 aaKnown RBP17.46■□□□□ 0.39
PDZD3-205ENST00000526836 ITGAEP38570 1179 aa17.46■□□□□ 0.39
PDZD3-205ENST00000526836 CEBPAP49715 358 aaPredicted RBP17.46■□□□□ 0.39
PDZD3-205ENST00000526836 ATP7AQ04656 1500 aa17.46■□□□□ 0.39
PDZD3-205ENST00000526836 ESF1Q9H501 851 aaKnown RBP17.45■□□□□ 0.38
PDZD3-205ENST00000526836 ARHGEF5Q12774 1597 aa17.44■□□□□ 0.38
PDZD3-205ENST00000526836 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
PDZD3-205ENST00000526836 DAPK1P53355 1430 aa17.43■□□□□ 0.38
PDZD3-205ENST00000526836 ABCA6Q8N139 1617 aa17.43■□□□□ 0.38
PDZD3-205ENST00000526836 SIGLEC1Q9BZZ2 1709 aa17.42■□□□□ 0.38
PDZD3-205ENST00000526836 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
PDZD3-205ENST00000526836 AGLP35573 1532 aa17.41■□□□□ 0.38
PDZD3-205ENST00000526836 PTPRMP28827 1452 aa17.4■□□□□ 0.38
PDZD3-205ENST00000526836 REREQ9P2R6 1566 aa17.39■□□□□ 0.37
PDZD3-205ENST00000526836 INO80Q9ULG1 1556 aaPredicted RBP17.39■□□□□ 0.37
PDZD3-205ENST00000526836 ADAMTSL3P82987 1691 aa17.39■□□□□ 0.37
PDZD3-205ENST00000526836 PTPRKQ15262 1439 aa17.38■□□□□ 0.37
PDZD3-205ENST00000526836 BCORL1Q5H9F3 1711 aa17.38■□□□□ 0.37
PDZD3-205ENST00000526836 ANKRD30AQ9BXX3 1397 aa17.38■□□□□ 0.37
PDZD3-205ENST00000526836 NCOA1Q15788 1441 aa17.37■□□□□ 0.37
PDZD3-205ENST00000526836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
PDZD3-205ENST00000526836 KIF15Q9NS87 1388 aa17.36■□□□□ 0.37
PDZD3-205ENST00000526836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
PDZD3-205ENST00000526836 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
PDZD3-205ENST00000526836 ZMYM3Q14202 1370 aa17.35■□□□□ 0.37
PDZD3-205ENST00000526836 MADDQ8WXG6 1647 aa17.33■□□□□ 0.37
PDZD3-205ENST00000526836 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
PDZD3-205ENST00000526836 RRBP1Q9P2E9 1410 aaKnown RBP17.32■□□□□ 0.36
PDZD3-205ENST00000526836 SHANK2Q9UPX8 1470 aa17.31■□□□□ 0.36
PDZD3-205ENST00000526836 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
PDZD3-205ENST00000526836 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
PDZD3-205ENST00000526836 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
PDZD3-205ENST00000526836 CNTLNQ9NXG0 1405 aa17.28■□□□□ 0.36
PDZD3-205ENST00000526836 DUOX2Q9NRD8 1548 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms