RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 CDK13Q14004 1512 aaKnown RBP13.75□□□□□ -0.21
USP35-201ENST00000526425 CLSPNQ9HAW4 1339 aa13.74□□□□□ -0.21
USP35-201ENST00000526425 MYOM3Q5VTT5 1437 aa13.74□□□□□ -0.21
USP35-201ENST00000526425 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
USP35-201ENST00000526425 DISP1Q96F81 1524 aa13.73□□□□□ -0.21
USP35-201ENST00000526425 ANP32CO43423 234 aa13.72□□□□□ -0.21
USP35-201ENST00000526425 CEP170Q5SW79 1584 aa13.72□□□□□ -0.21
USP35-201ENST00000526425 EHBP1L1Q8N3D4 1523 aa13.72□□□□□ -0.21
USP35-201ENST00000526425 KIAA0556O60303 1618 aa13.71□□□□□ -0.21
USP35-201ENST00000526425 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.22
USP35-201ENST00000526425 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
USP35-201ENST00000526425 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
USP35-201ENST00000526425 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
USP35-201ENST00000526425 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
USP35-201ENST00000526425 ZNF644Q9H582 1327 aaPredicted RBP13.68□□□□□ -0.22
USP35-201ENST00000526425 CFAP43Q8NDM7 1665 aa13.67□□□□□ -0.22
USP35-201ENST00000526425 FKBP8Q14318 412 aa13.67□□□□□ -0.22
USP35-201ENST00000526425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
USP35-201ENST00000526425 NUP153P49790 1475 aaKnown RBP13.66□□□□□ -0.22
USP35-201ENST00000526425 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
USP35-201ENST00000526425 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
USP35-201ENST00000526425 TROQ12816 1431 aaPredicted RBP13.65□□□□□ -0.22
USP35-201ENST00000526425 A0A0U1RQG5 324 aaPredicted RBP13.65□□□□□ -0.23
USP35-201ENST00000526425 NEFLP07196 543 aa13.65□□□□□ -0.23
USP35-201ENST00000526425 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.23
USP35-201ENST00000526425 SENP3-EIF4A1A0A087X0R7 540 aa13.64□□□□□ -0.23
USP35-201ENST00000526425 RAPGEF6Q8TEU7 1601 aa13.63□□□□□ -0.23
USP35-201ENST00000526425 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
USP35-201ENST00000526425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP35-201ENST00000526425 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
USP35-201ENST00000526425 UACAQ9BZF9 1416 aa13.61□□□□□ -0.23
USP35-201ENST00000526425 MIA2Q96PC5 1412 aa13.6□□□□□ -0.23
USP35-201ENST00000526425 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
USP35-201ENST00000526425 MSH5O43196 834 aa13.59□□□□□ -0.23
USP35-201ENST00000526425 MPHOSPH9Q99550 1183 aa13.58□□□□□ -0.24
USP35-201ENST00000526425 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP35-201ENST00000526425 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
USP35-201ENST00000526425 MAGI3Q5TCQ9 1506 aa13.56□□□□□ -0.24
USP35-201ENST00000526425 ATP10BO94823 1461 aa13.56□□□□□ -0.24
USP35-201ENST00000526425 CHD1O14646 1710 aa13.55□□□□□ -0.24
USP35-201ENST00000526425 RGL3Q3MIN7 710 aa13.55□□□□□ -0.24
USP35-201ENST00000526425 EIF4G2P78344 907 aaKnown RBP eCLIP13.54□□□□□ -0.24
USP35-201ENST00000526425 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
USP35-201ENST00000526425 PTPN23Q9H3S7 1636 aa13.54□□□□□ -0.24
USP35-201ENST00000526425 HNRNPUQ00839 825 aaKnown RBP eCLIP13.54□□□□□ -0.24
USP35-201ENST00000526425 L3MBTL2Q969R5 705 aa13.53□□□□□ -0.24
USP35-201ENST00000526425 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
USP35-201ENST00000526425 HFM1A2PYH4 1435 aa13.53□□□□□ -0.24
USP35-201ENST00000526425 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
USP35-201ENST00000526425 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
USP35-201ENST00000526425 PTPRKQ15262 1439 aa13.51□□□□□ -0.25
USP35-201ENST00000526425 VSIG10Q8N0Z9 540 aa13.51□□□□□ -0.25
USP35-201ENST00000526425 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
USP35-201ENST00000526425 IRX6P78412 446 aaPredicted RBP13.5□□□□□ -0.25
USP35-201ENST00000526425 PKD2Q13563 968 aa13.5□□□□□ -0.25
USP35-201ENST00000526425 NAIPQ13075 1403 aa13.5□□□□□ -0.25
USP35-201ENST00000526425 DAPK1P53355 1430 aa13.48□□□□□ -0.25
USP35-201ENST00000526425 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
USP35-201ENST00000526425 GPATCH8Q9UKJ3 1502 aaKnown RBP13.48□□□□□ -0.25
USP35-201ENST00000526425 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
USP35-201ENST00000526425 KIF14Q15058 1648 aa13.47□□□□□ -0.25
USP35-201ENST00000526425 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
USP35-201ENST00000526425 AEBP2Q6ZN18 517 aaPredicted RBP13.46□□□□□ -0.25
USP35-201ENST00000526425 ABCA8O94911 1581 aa13.46□□□□□ -0.26
USP35-201ENST00000526425 ABCC5O15440 1437 aa13.45□□□□□ -0.26
USP35-201ENST00000526425 CAMSAP2Q08AD1 1489 aa13.45□□□□□ -0.26
USP35-201ENST00000526425 LRRIQ1Q96JM4 1722 aa13.44□□□□□ -0.26
USP35-201ENST00000526425 TCOF1Q13428 1488 aaKnown RBP13.44□□□□□ -0.26
USP35-201ENST00000526425 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
USP35-201ENST00000526425 ERCC6L2Q5T890 1561 aa13.44□□□□□ -0.26
USP35-201ENST00000526425 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
USP35-201ENST00000526425 MAPKBP1O60336 1514 aa13.43□□□□□ -0.26
USP35-201ENST00000526425 NUP155O75694 1391 aa13.42□□□□□ -0.26
USP35-201ENST00000526425 ABCC2Q92887 1545 aa13.42□□□□□ -0.26
USP35-201ENST00000526425 ERICH6BQ5W0A0 696 aa13.42□□□□□ -0.26
USP35-201ENST00000526425 DCAF11Q8TEB1 546 aa13.41□□□□□ -0.26
USP35-201ENST00000526425 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
USP35-201ENST00000526425 ROCK1Q13464 1354 aa13.41□□□□□ -0.26
USP35-201ENST00000526425 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
USP35-201ENST00000526425 C9orf84Q5VXU9 1444 aa13.4□□□□□ -0.26
USP35-201ENST00000526425 ANKRD50Q9ULJ7 1429 aa13.4□□□□□ -0.26
USP35-201ENST00000526425 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
USP35-201ENST00000526425 CHGAP10645 457 aaKnown RBP13.39□□□□□ -0.27
USP35-201ENST00000526425 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
USP35-201ENST00000526425 AKNAQ7Z591 1439 aa13.38□□□□□ -0.27
USP35-201ENST00000526425 NCOA1Q15788 1441 aa13.37□□□□□ -0.27
USP35-201ENST00000526425 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
USP35-201ENST00000526425 AFAP1Q8N556 730 aa13.36□□□□□ -0.27
USP35-201ENST00000526425 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
USP35-201ENST00000526425 NBPF8Q3BBV2 869 aa13.34□□□□□ -0.27
USP35-201ENST00000526425 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
USP35-201ENST00000526425 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.27
USP35-201ENST00000526425 ABCC10Q5T3U5 1492 aa13.33□□□□□ -0.28
USP35-201ENST00000526425 PLEKHH2Q8IVE3 1493 aa13.33□□□□□ -0.28
USP35-201ENST00000526425 SHROOM2Q13796 1616 aa13.32□□□□□ -0.28
USP35-201ENST00000526425 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
USP35-201ENST00000526425 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
USP35-201ENST00000526425 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
USP35-201ENST00000526425 TMC1Q8TDI8 760 aa13.3□□□□□ -0.28
USP35-201ENST00000526425 PLCH2O75038 1416 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms