RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 KIF14Q15058 1648 aa15.91■□□□□ 0.14
TRAPPC4-206ENST00000525303 FBXO41Q8TF61 875 aa15.91■□□□□ 0.14
TRAPPC4-206ENST00000525303 PLCH2O75038 1416 aa15.91■□□□□ 0.14
TRAPPC4-206ENST00000525303 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
TRAPPC4-206ENST00000525303 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
TRAPPC4-206ENST00000525303 ATP1B4Q9UN42 357 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC4-206ENST00000525303 FMN1Q68DA7 1419 aa15.9■□□□□ 0.14
TRAPPC4-206ENST00000525303 SCAPERQ9BY12 1400 aa15.9■□□□□ 0.14
TRAPPC4-206ENST00000525303 ARHGAP35Q9NRY4 1499 aa15.9■□□□□ 0.14
TRAPPC4-206ENST00000525303 MLECQ14165 292 aa15.87■□□□□ 0.13
TRAPPC4-206ENST00000525303 CDC42BPBQ9Y5S2 1711 aa15.87■□□□□ 0.13
TRAPPC4-206ENST00000525303 HSPA2P54652 639 aa15.85■□□□□ 0.13
TRAPPC4-206ENST00000525303 PREX1Q8TCU6 1659 aa15.85■□□□□ 0.13
TRAPPC4-206ENST00000525303 ATP10AO60312 1499 aa15.84■□□□□ 0.13
TRAPPC4-206ENST00000525303 ARHGAP5Q13017 1502 aa15.84■□□□□ 0.13
TRAPPC4-206ENST00000525303 ARHGEF12Q9NZN5 1544 aa15.84■□□□□ 0.13
TRAPPC4-206ENST00000525303 EFCAB2Q5VUJ9 269 aa15.83■□□□□ 0.12
TRAPPC4-206ENST00000525303 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC4-206ENST00000525303 C9orf84Q5VXU9 1444 aa15.83■□□□□ 0.12
TRAPPC4-206ENST00000525303 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC4-206ENST00000525303 KDM5CP41229 1560 aa15.82■□□□□ 0.12
TRAPPC4-206ENST00000525303 ZNF518AQ6AHZ1 1483 aa15.81■□□□□ 0.12
TRAPPC4-206ENST00000525303 SETD1BQ9UPS6 1966 aaKnown RBP15.81■□□□□ 0.12
TRAPPC4-206ENST00000525303 PREX2Q70Z35 1606 aa15.8■□□□□ 0.12
TRAPPC4-206ENST00000525303 CLIP1P30622 1438 aa15.8■□□□□ 0.12
TRAPPC4-206ENST00000525303 CDC42BPAQ5VT25 1732 aa15.79■□□□□ 0.12
TRAPPC4-206ENST00000525303 DIP2CQ9Y2E4 1556 aa15.79■□□□□ 0.12
TRAPPC4-206ENST00000525303 ITSN2Q9NZM3 1697 aa15.78■□□□□ 0.12
TRAPPC4-206ENST00000525303 ABCA6Q8N139 1617 aa15.78■□□□□ 0.12
TRAPPC4-206ENST00000525303 STRCQ7RTU9 1775 aa15.76■□□□□ 0.11
TRAPPC4-206ENST00000525303 C3P01024 1663 aa15.76■□□□□ 0.11
TRAPPC4-206ENST00000525303 REREQ9P2R6 1566 aa15.75■□□□□ 0.11
TRAPPC4-206ENST00000525303 AFAP1Q8N556 730 aa15.75■□□□□ 0.11
TRAPPC4-206ENST00000525303 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC4-206ENST00000525303 ABCC1P33527 1531 aa15.74■□□□□ 0.11
TRAPPC4-206ENST00000525303 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC4-206ENST00000525303 MYT1LQ9UL68 1186 aa15.74■□□□□ 0.11
TRAPPC4-206ENST00000525303 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
TRAPPC4-206ENST00000525303 KIDINS220Q9ULH0 1771 aa15.73■□□□□ 0.11
TRAPPC4-206ENST00000525303 MLH3Q9UHC1 1453 aa15.71■□□□□ 0.11
TRAPPC4-206ENST00000525303 CASKIN1Q8WXD9 1431 aa15.71■□□□□ 0.11
TRAPPC4-206ENST00000525303 TRAPPC8Q9Y2L5 1435 aa15.69■□□□□ 0.1
TRAPPC4-206ENST00000525303 CERKQ8TCT0 537 aa15.69■□□□□ 0.1
TRAPPC4-206ENST00000525303 AGLP35573 1532 aa15.68■□□□□ 0.1
TRAPPC4-206ENST00000525303 UHRF1BP1Q6BDS2 1440 aa15.68■□□□□ 0.1
TRAPPC4-206ENST00000525303 FYCO1Q9BQS8 1478 aa15.66■□□□□ 0.1
TRAPPC4-206ENST00000525303 SUPT6HQ7KZ85 1726 aaKnown RBP15.66■□□□□ 0.1
TRAPPC4-206ENST00000525303 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
TRAPPC4-206ENST00000525303 MROH2AA6NES4 1674 aa15.63■□□□□ 0.09
TRAPPC4-206ENST00000525303 SYCP2Q9BX26 1530 aa15.63■□□□□ 0.09
TRAPPC4-206ENST00000525303 ESF1Q9H501 851 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-206ENST00000525303 DMRT2Q9Y5R5 561 aa15.61■□□□□ 0.09
TRAPPC4-206ENST00000525303 GPATCH8Q9UKJ3 1502 aaKnown RBP15.6■□□□□ 0.09
TRAPPC4-206ENST00000525303 ZNF777Q9ULD5 760 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC4-206ENST00000525303 CLTCQ00610 1675 aaKnown RBP15.6■□□□□ 0.09
TRAPPC4-206ENST00000525303 CNTLNQ9NXG0 1405 aa15.59■□□□□ 0.09
TRAPPC4-206ENST00000525303 INO80Q9ULG1 1556 aaPredicted RBP15.58■□□□□ 0.09
TRAPPC4-206ENST00000525303 ATP7AQ04656 1500 aa15.58■□□□□ 0.08
TRAPPC4-206ENST00000525303 PTPRTO14522 1441 aa15.56■□□□□ 0.08
TRAPPC4-206ENST00000525303 PLXNC1O60486 1568 aa15.56■□□□□ 0.08
TRAPPC4-206ENST00000525303 ADGBQ8N7X0 1667 aa15.55■□□□□ 0.08
TRAPPC4-206ENST00000525303 SPAG9O60271 1321 aaKnown RBP15.55■□□□□ 0.08
TRAPPC4-206ENST00000525303 HNRNPMP52272 730 aaKnown RBP eCLIP15.55■□□□□ 0.08
TRAPPC4-206ENST00000525303 ZNF142P52746 1687 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC4-206ENST00000525303 CAMSAP1Q5T5Y3 1602 aa15.54■□□□□ 0.08
TRAPPC4-206ENST00000525303 LTBP4Q8N2S1 1624 aa15.53■□□□□ 0.08
TRAPPC4-206ENST00000525303 MYO3AQ8NEV4 1616 aa15.53■□□□□ 0.08
TRAPPC4-206ENST00000525303 PLEKHH2Q8IVE3 1493 aa15.52■□□□□ 0.08
TRAPPC4-206ENST00000525303 NPATQ14207 1427 aa15.52■□□□□ 0.08
TRAPPC4-206ENST00000525303 NCOA1Q15788 1441 aa15.52■□□□□ 0.08
TRAPPC4-206ENST00000525303 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC4-206ENST00000525303 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
TRAPPC4-206ENST00000525303 ZMYM3Q14202 1370 aa15.51■□□□□ 0.07
TRAPPC4-206ENST00000525303 CCNB3Q8WWL7 1395 aa15.51■□□□□ 0.07
TRAPPC4-206ENST00000525303 TIAM1Q13009 1591 aa15.51■□□□□ 0.07
TRAPPC4-206ENST00000525303 CFDP1Q9UEE9 299 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-206ENST00000525303 A2MP01023 1474 aa15.51■□□□□ 0.07
TRAPPC4-206ENST00000525303 MTUS2Q5JR59 1369 aa15.5■□□□□ 0.07
TRAPPC4-206ENST00000525303 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
TRAPPC4-206ENST00000525303 CEP170BQ9Y4F5 1589 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC4-206ENST00000525303 IQSEC2Q5JU85 1478 aa15.46■□□□□ 0.06
TRAPPC4-206ENST00000525303 GGT6Q6P531 493 aa15.45■□□□□ 0.06
TRAPPC4-206ENST00000525303 DISP3Q9P2K9 1392 aa15.45■□□□□ 0.06
TRAPPC4-206ENST00000525303 ZNF644Q9H582 1327 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC4-206ENST00000525303 PTPRKQ15262 1439 aa15.44■□□□□ 0.06
TRAPPC4-206ENST00000525303 NCKAP5LQ9HCH0 1330 aa15.43■□□□□ 0.06
TRAPPC4-206ENST00000525303 POLR1AO95602 1720 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC4-206ENST00000525303 MBD5Q9P267 1494 aa15.43■□□□□ 0.06
TRAPPC4-206ENST00000525303 SPATA31D1Q6ZQQ2 1576 aa15.43■□□□□ 0.06
TRAPPC4-206ENST00000525303 PLA2R1Q13018 1463 aa15.42■□□□□ 0.06
TRAPPC4-206ENST00000525303 CEP162Q5TB80 1403 aa15.41■□□□□ 0.06
TRAPPC4-206ENST00000525303 DNMT1P26358 1616 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-206ENST00000525303 RTEL1-TNFRSF6BF6WH68 1400 aa15.4■□□□□ 0.06
TRAPPC4-206ENST00000525303 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
TRAPPC4-206ENST00000525303 ILDR2Q71H61 639 aa15.39■□□□□ 0.05
TRAPPC4-206ENST00000525303 ZNF335Q9H4Z2 1342 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC4-206ENST00000525303 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
TRAPPC4-206ENST00000525303 CAMSAP2Q08AD1 1489 aa15.38■□□□□ 0.05
TRAPPC4-206ENST00000525303 PKD2Q13563 968 aa15.37■□□□□ 0.05
TRAPPC4-206ENST00000525303 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms