RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 SCAPERQ9BY12 1400 aa39.67■■■■□ 3.94
USP47-205ENST00000525257 MAGI2Q86UL8 1455 aa39.67■■■■□ 3.94
USP47-205ENST00000525257 MYO5CQ9NQX4 1742 aa39.65■■■■□ 3.94
USP47-205ENST00000525257 CHIC1Q5VXU3 224 aa39.62■■■■□ 3.93
USP47-205ENST00000525257 KIF14Q15058 1648 aa39.61■■■■□ 3.93
USP47-205ENST00000525257 PLPPR3Q6T4P5 718 aa39.6■■■■□ 3.93
USP47-205ENST00000525257 CDK11AQ9UQ88 783 aaPredicted RBP39.58■■■■□ 3.93
USP47-205ENST00000525257 MLECQ14165 292 aa39.56■■■■□ 3.92
USP47-205ENST00000525257 EFCAB2Q5VUJ9 269 aa39.55■■■■□ 3.92
USP47-205ENST00000525257 FER1L4A9Z1Z3 1794 aa39.53■■■■□ 3.92
USP47-205ENST00000525257 LRRIQ1Q96JM4 1722 aa39.52■■■■□ 3.92
USP47-205ENST00000525257 TROQ12816 1431 aaPredicted RBP39.51■■■■□ 3.92
USP47-205ENST00000525257 FBXO41Q8TF61 875 aa39.51■■■■□ 3.92
USP47-205ENST00000525257 ATP10AO60312 1499 aa39.48■■■■□ 3.91
USP47-205ENST00000525257 ARHGAP5Q13017 1502 aa39.47■■■■□ 3.91
USP47-205ENST00000525257 CLIP1P30622 1438 aa39.47■■■■□ 3.91
USP47-205ENST00000525257 HSPA2P54652 639 aa39.46■■■■□ 3.91
USP47-205ENST00000525257 C9orf84Q5VXU9 1444 aa39.45■■■■□ 3.91
USP47-205ENST00000525257 ZNF518AQ6AHZ1 1483 aa39.42■■■■□ 3.9
USP47-205ENST00000525257 ARHGEF12Q9NZN5 1544 aa39.4■■■■□ 3.9
USP47-205ENST00000525257 KDM5CP41229 1560 aa39.36■■■■□ 3.89
USP47-205ENST00000525257 AFAP1Q8N556 730 aa39.35■■■■□ 3.89
USP47-205ENST00000525257 CDC42BPBQ9Y5S2 1711 aa39.34■■■■□ 3.89
USP47-205ENST00000525257 MYT1LQ9UL68 1186 aa39.29■■■■□ 3.88
USP47-205ENST00000525257 CASKIN1Q8WXD9 1431 aa39.29■■■■□ 3.88
USP47-205ENST00000525257 CCDC18Q5T9S5 1454 aa39.28■■■■□ 3.88
USP47-205ENST00000525257 PREX2Q70Z35 1606 aa39.28■■■■□ 3.88
USP47-205ENST00000525257 DIP2CQ9Y2E4 1556 aa39.27■■■■□ 3.88
USP47-205ENST00000525257 PREX1Q8TCU6 1659 aa39.23■■■■□ 3.87
USP47-205ENST00000525257 CEBPAP49715 358 aaPredicted RBP39.23■■■■□ 3.87
USP47-205ENST00000525257 ABCA6Q8N139 1617 aa39.22■■■■□ 3.87
USP47-205ENST00000525257 ABCC1P33527 1531 aa39.21■■■■□ 3.87
USP47-205ENST00000525257 REREQ9P2R6 1566 aa39.18■■■■□ 3.86
USP47-205ENST00000525257 ITSN2Q9NZM3 1697 aa39.18■■■■□ 3.86
USP47-205ENST00000525257 MLH3Q9UHC1 1453 aa39.17■■■■□ 3.86
USP47-205ENST00000525257 TRAPPC8Q9Y2L5 1435 aa39.17■■■■□ 3.86
USP47-205ENST00000525257 CDC42BPAQ5VT25 1732 aa39.14■■■■□ 3.86
USP47-205ENST00000525257 FYCO1Q9BQS8 1478 aa39.13■■■■□ 3.85
USP47-205ENST00000525257 KIDINS220Q9ULH0 1771 aa39.05■■■■□ 3.84
USP47-205ENST00000525257 AGLP35573 1532 aa39.04■■■■□ 3.84
USP47-205ENST00000525257 UHRF1BP1Q6BDS2 1440 aa39.04■■■■□ 3.84
USP47-205ENST00000525257 CERKQ8TCT0 537 aa39.03■■■■□ 3.84
USP47-205ENST00000525257 C3P01024 1663 aa39.03■■■■□ 3.84
USP47-205ENST00000525257 ZNF777Q9ULD5 760 aaPredicted RBP38.99■■■■□ 3.83
USP47-205ENST00000525257 SAMD9LQ8IVG5 1584 aa38.99■■■■□ 3.83
USP47-205ENST00000525257 SETD1BQ9UPS6 1966 aaKnown RBP38.99■■■■□ 3.83
USP47-205ENST00000525257 STRCQ7RTU9 1775 aa38.98■■■■□ 3.83
USP47-205ENST00000525257 ESF1Q9H501 851 aaKnown RBP38.97■■■■□ 3.83
USP47-205ENST00000525257 SYCP2Q9BX26 1530 aa38.95■■■■□ 3.83
USP47-205ENST00000525257 GPATCH8Q9UKJ3 1502 aaKnown RBP38.94■■■■□ 3.82
USP47-205ENST00000525257 DMRT2Q9Y5R5 561 aa38.88■■■■□ 3.81
USP47-205ENST00000525257 HNRNPMP52272 730 aaKnown RBP eCLIP38.86■■■■□ 3.81
USP47-205ENST00000525257 CNTLNQ9NXG0 1405 aa38.85■■■■□ 3.81
USP47-205ENST00000525257 SPAG9O60271 1321 aaKnown RBP38.85■■■■□ 3.81
USP47-205ENST00000525257 SUPT6HQ7KZ85 1726 aaKnown RBP38.81■■■■□ 3.8
USP47-205ENST00000525257 ATP7AQ04656 1500 aa38.8■■■■□ 3.8
USP47-205ENST00000525257 CFDP1Q9UEE9 299 aaPredicted RBP38.8■■■■□ 3.8
USP47-205ENST00000525257 CCNB3Q8WWL7 1395 aa38.8■■■■□ 3.8
USP47-205ENST00000525257 PLEKHH2Q8IVE3 1493 aa38.78■■■■□ 3.8
USP47-205ENST00000525257 MTUS2Q5JR59 1369 aa38.77■■■■□ 3.8
USP47-205ENST00000525257 KIAA1107Q9UPP5 1409 aa38.77■■■■□ 3.8
USP47-205ENST00000525257 INO80Q9ULG1 1556 aaPredicted RBP38.77■■■■□ 3.8
USP47-205ENST00000525257 MROH2AA6NES4 1674 aa38.77■■■■□ 3.8
USP47-205ENST00000525257 PTPRTO14522 1441 aa38.73■■■■□ 3.79
USP47-205ENST00000525257 PLXNC1O60486 1568 aa38.71■■■■□ 3.79
USP47-205ENST00000525257 A2MP01023 1474 aa38.69■■■■□ 3.78
USP47-205ENST00000525257 NPATQ14207 1427 aa38.68■■■■□ 3.78
USP47-205ENST00000525257 ZMYM3Q14202 1370 aa38.68■■■■□ 3.78
USP47-205ENST00000525257 CLTCQ00610 1675 aaKnown RBP38.68■■■■□ 3.78
USP47-205ENST00000525257 TIAM1Q13009 1591 aa38.66■■■■□ 3.78
USP47-205ENST00000525257 NCOA1Q15788 1441 aa38.66■■■■□ 3.78
USP47-205ENST00000525257 EHBP1L1Q8N3D4 1523 aa38.63■■■■□ 3.78
USP47-205ENST00000525257 CAMSAP1Q5T5Y3 1602 aa38.61■■■■□ 3.77
USP47-205ENST00000525257 ZNF644Q9H582 1327 aaPredicted RBP38.61■■■■□ 3.77
USP47-205ENST00000525257 ADGBQ8N7X0 1667 aa38.59■■■■□ 3.77
USP47-205ENST00000525257 GGT6Q6P531 493 aa38.57■■■■□ 3.76
USP47-205ENST00000525257 LTBP4Q8N2S1 1624 aa38.56■■■■□ 3.76
USP47-205ENST00000525257 MYO3AQ8NEV4 1616 aa38.54■■■■□ 3.76
USP47-205ENST00000525257 MBD5Q9P267 1494 aa38.54■■■■□ 3.76
USP47-205ENST00000525257 CEP162Q5TB80 1403 aa38.53■■■■□ 3.76
USP47-205ENST00000525257 PTPRKQ15262 1439 aa38.51■■■■□ 3.76
USP47-205ENST00000525257 ZNF142P52746 1687 aaPredicted RBP38.51■■■■□ 3.76
USP47-205ENST00000525257 NCKAP5LQ9HCH0 1330 aa38.46■■■■□ 3.75
USP47-205ENST00000525257 CEP170BQ9Y4F5 1589 aaPredicted RBP38.46■■■■□ 3.75
USP47-205ENST00000525257 RTEL1-TNFRSF6BF6WH68 1400 aa38.44■■■■□ 3.74
USP47-205ENST00000525257 PPP6R1Q9UPN7 881 aa38.41■■■■□ 3.74
USP47-205ENST00000525257 NCOA2Q15596 1464 aa38.4■■■■□ 3.74
USP47-205ENST00000525257 IQSEC2Q5JU85 1478 aa38.4■■■■□ 3.74
USP47-205ENST00000525257 PLA2R1Q13018 1463 aa38.39■■■■□ 3.74
USP47-205ENST00000525257 DHX29Q7Z478 1369 aaKnown RBP38.38■■■■□ 3.73
USP47-205ENST00000525257 CAMSAP2Q08AD1 1489 aa38.37■■■■□ 3.73
USP47-205ENST00000525257 CCDC141Q6ZP82 1450 aa38.37■■■■□ 3.73
USP47-205ENST00000525257 TCOF1Q13428 1488 aaKnown RBP38.34■■■■□ 3.73
USP47-205ENST00000525257 DISP3Q9P2K9 1392 aa38.33■■■■□ 3.73
USP47-205ENST00000525257 PKD2Q13563 968 aa38.33■■■■□ 3.73
USP47-205ENST00000525257 ZNF335Q9H4Z2 1342 aaPredicted RBP38.33■■■■□ 3.73
USP47-205ENST00000525257 KIF3BO15066 747 aa38.29■■■■□ 3.72
USP47-205ENST00000525257 A2ML1A8K2U0 1454 aa38.28■■■■□ 3.72
USP47-205ENST00000525257 DNMT1P26358 1616 aaKnown RBP38.26■■■■□ 3.71
USP47-205ENST00000525257 KDM5DQ9BY66 1539 aa38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms