RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 GPATCH8Q9UKJ3 1502 aaKnown RBP7.17□□□□□ -1.26
CHMP4A-202ENST00000524955 KDM6BO15054 1643 aa7.16□□□□□ -1.26
CHMP4A-202ENST00000524955 PHLDB1Q86UU1 1377 aa7.16□□□□□ -1.26
CHMP4A-202ENST00000524955 AKNAQ7Z591 1439 aa7.16□□□□□ -1.26
CHMP4A-202ENST00000524955 AFAP1Q8N556 730 aa7.15□□□□□ -1.26
CHMP4A-202ENST00000524955 MYT1LQ9UL68 1186 aa7.15□□□□□ -1.26
CHMP4A-202ENST00000524955 SCAPERQ9BY12 1400 aa7.15□□□□□ -1.27
CHMP4A-202ENST00000524955 ADGRL1O94910 1474 aa7.14□□□□□ -1.27
CHMP4A-202ENST00000524955 MAP3K1Q13233 1512 aa7.14□□□□□ -1.27
CHMP4A-202ENST00000524955 ARHGEF12Q9NZN5 1544 aa7.14□□□□□ -1.27
CHMP4A-202ENST00000524955 SUPT6HQ7KZ85 1726 aaKnown RBP7.13□□□□□ -1.27
CHMP4A-202ENST00000524955 MYO5CQ9NQX4 1742 aa7.13□□□□□ -1.27
CHMP4A-202ENST00000524955 TRAPPC8Q9Y2L5 1435 aa7.13□□□□□ -1.27
CHMP4A-202ENST00000524955 DENND4BO75064 1496 aaPredicted RBP7.12□□□□□ -1.27
CHMP4A-202ENST00000524955 NEO1Q92859 1461 aa7.12□□□□□ -1.27
CHMP4A-202ENST00000524955 FAM50AQ14320 339 aaKnown RBP7.12□□□□□ -1.27
CHMP4A-202ENST00000524955 CDC42BPAQ5VT25 1732 aa7.12□□□□□ -1.27
CHMP4A-202ENST00000524955 CDC42BPBQ9Y5S2 1711 aa7.12□□□□□ -1.27
CHMP4A-202ENST00000524955 PREX2Q70Z35 1606 aa7.12□□□□□ -1.27
CHMP4A-202ENST00000524955 SAMD9LQ8IVG5 1584 aa7.12□□□□□ -1.27
CHMP4A-202ENST00000524955 MYOM3Q5VTT5 1437 aa7.11□□□□□ -1.27
CHMP4A-202ENST00000524955 ITGAEP38570 1179 aa7.11□□□□□ -1.27
CHMP4A-202ENST00000524955 FRMPD1Q5SYB0 1578 aa7.11□□□□□ -1.27
CHMP4A-202ENST00000524955 ARAP3Q8WWN8 1544 aa7.11□□□□□ -1.27
CHMP4A-202ENST00000524955 SYCP2Q9BX26 1530 aa7.11□□□□□ -1.27
CHMP4A-202ENST00000524955 CAMSAP2Q08AD1 1489 aa7.11□□□□□ -1.27
CHMP4A-202ENST00000524955 YEATS2Q9ULM3 1422 aa7.1□□□□□ -1.27
CHMP4A-202ENST00000524955 POGZQ7Z3K3 1410 aa7.1□□□□□ -1.27
CHMP4A-202ENST00000524955 CFAP74Q9C0B2 1584 aa7.09□□□□□ -1.27
CHMP4A-202ENST00000524955 CHIC2Q9UKJ5 165 aa7.09□□□□□ -1.27
CHMP4A-202ENST00000524955 ABCC1P33527 1531 aa7.09□□□□□ -1.27
CHMP4A-202ENST00000524955 FGD6Q6ZV73 1430 aa7.09□□□□□ -1.28
CHMP4A-202ENST00000524955 SPAG9O60271 1321 aaKnown RBP7.08□□□□□ -1.28
CHMP4A-202ENST00000524955 ARID4BQ4LE39 1312 aaPredicted RBP7.08□□□□□ -1.28
CHMP4A-202ENST00000524955 MLECQ14165 292 aa7.08□□□□□ -1.28
CHMP4A-202ENST00000524955 ITSN2Q9NZM3 1697 aa7.07□□□□□ -1.28
CHMP4A-202ENST00000524955 MBD5Q9P267 1494 aa7.07□□□□□ -1.28
CHMP4A-202ENST00000524955 ZNF518AQ6AHZ1 1483 aa7.06□□□□□ -1.28
CHMP4A-202ENST00000524955 PTPN23Q9H3S7 1636 aa7.06□□□□□ -1.28
CHMP4A-202ENST00000524955 PLPPR3Q6T4P5 718 aa7.06□□□□□ -1.28
CHMP4A-202ENST00000524955 MIA2Q96PC5 1412 aa7.06□□□□□ -1.28
CHMP4A-202ENST00000524955 RICTORQ6R327 1708 aa7.06□□□□□ -1.28
CHMP4A-202ENST00000524955 ABCC5O15440 1437 aa7.05□□□□□ -1.28
CHMP4A-202ENST00000524955 KIAA1107Q9UPP5 1409 aa7.05□□□□□ -1.28
CHMP4A-202ENST00000524955 TSPY4P0CV99 314 aa7.05□□□□□ -1.28
CHMP4A-202ENST00000524955 TSPY10P0CW01 314 aa7.05□□□□□ -1.28
CHMP4A-202ENST00000524955 RRP7BPQ9NSQ0 103 aa7.05□□□□□ -1.28
CHMP4A-202ENST00000524955 ZFYVE16Q7Z3T8 1539 aa7.05□□□□□ -1.28
CHMP4A-202ENST00000524955 CCDC141Q6ZP82 1450 aa7.04□□□□□ -1.28
CHMP4A-202ENST00000524955 PLEKHH2Q8IVE3 1493 aa7.04□□□□□ -1.28
CHMP4A-202ENST00000524955 TCOF1Q13428 1488 aaKnown RBP7.04□□□□□ -1.28
CHMP4A-202ENST00000524955 KDM5CP41229 1560 aa7.03□□□□□ -1.28
CHMP4A-202ENST00000524955 DAPK1P53355 1430 aa7.03□□□□□ -1.28
CHMP4A-202ENST00000524955 PTPRKQ15262 1439 aa7.03□□□□□ -1.28
CHMP4A-202ENST00000524955 ZMYM4Q5VZL5 1548 aa7.03□□□□□ -1.28
CHMP4A-202ENST00000524955 KDM4FA0A1W2PPD8 638 aa7.03□□□□□ -1.28
CHMP4A-202ENST00000524955 HECW2Q9P2P5 1572 aa7.03□□□□□ -1.28
CHMP4A-202ENST00000524955 C9orf84Q5VXU9 1444 aa7.02□□□□□ -1.29
CHMP4A-202ENST00000524955 ATP7AQ04656 1500 aa7.02□□□□□ -1.29
CHMP4A-202ENST00000524955 ARHGEF40Q8TER5 1519 aa7.02□□□□□ -1.29
CHMP4A-202ENST00000524955 ABCA6Q8N139 1617 aa7.02□□□□□ -1.29
CHMP4A-202ENST00000524955 SIGLEC1Q9BZZ2 1709 aa7.02□□□□□ -1.29
CHMP4A-202ENST00000524955 ATP10AO60312 1499 aa7.02□□□□□ -1.29
CHMP4A-202ENST00000524955 MLH3Q9UHC1 1453 aa7.02□□□□□ -1.29
CHMP4A-202ENST00000524955 DIP2CQ9Y2E4 1556 aa7.02□□□□□ -1.29
CHMP4A-202ENST00000524955 KIDINS220Q9ULH0 1771 aa7.01□□□□□ -1.29
CHMP4A-202ENST00000524955 RSPH4AQ5TD94 716 aa7.01□□□□□ -1.29
CHMP4A-202ENST00000524955 GGT6Q6P531 493 aa7.01□□□□□ -1.29
CHMP4A-202ENST00000524955 ARHGEF5Q12774 1597 aa7□□□□□ -1.29
CHMP4A-202ENST00000524955 INO80Q9ULG1 1556 aaPredicted RBP7□□□□□ -1.29
CHMP4A-202ENST00000524955 A2MP01023 1474 aa7□□□□□ -1.29
CHMP4A-202ENST00000524955 MAGI2Q86UL8 1455 aa7□□□□□ -1.29
CHMP4A-202ENST00000524955 KIF3BO15066 747 aa7□□□□□ -1.29
CHMP4A-202ENST00000524955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7□□□□□ -1.294e-7■■■■□ 24.1
CHMP4A-202ENST00000524955 RRBP1Q9P2E9 1410 aaKnown RBP7□□□□□ -1.29
CHMP4A-202ENST00000524955 KIF15Q9NS87 1388 aa6.99□□□□□ -1.29
CHMP4A-202ENST00000524955 DNMT1P26358 1616 aaKnown RBP6.99□□□□□ -1.29
CHMP4A-202ENST00000524955 CEBPAP49715 358 aaPredicted RBP6.99□□□□□ -1.29
CHMP4A-202ENST00000524955 RTEL1-TNFRSF6BF6WH68 1400 aa6.99□□□□□ -1.29
CHMP4A-202ENST00000524955 DHX29Q7Z478 1369 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-202ENST00000524955 ANKRD30AQ9BXX3 1397 aa6.97□□□□□ -1.29
CHMP4A-202ENST00000524955 NCOA1Q15788 1441 aa6.97□□□□□ -1.29
CHMP4A-202ENST00000524955 AEBP2Q6ZN18 517 aaPredicted RBP6.97□□□□□ -1.29
CHMP4A-202ENST00000524955 MAST1Q9Y2H9 1570 aa6.96□□□□□ -1.29
CHMP4A-202ENST00000524955 SHANK2Q9UPX8 1470 aa6.96□□□□□ -1.3
CHMP4A-202ENST00000524955 CROCC2H7BZ55 1655 aa6.96□□□□□ -1.3
CHMP4A-202ENST00000524955 ADGBQ8N7X0 1667 aa6.96□□□□□ -1.3
CHMP4A-202ENST00000524955 ESF1Q9H501 851 aaKnown RBP6.95□□□□□ -1.3
CHMP4A-202ENST00000524955 PLXNC1O60486 1568 aa6.95□□□□□ -1.3
CHMP4A-202ENST00000524955 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHMP4A-202ENST00000524955 MADDQ8WXG6 1647 aa6.94□□□□□ -1.3
CHMP4A-202ENST00000524955 ADGRL2O95490 1459 aa6.94□□□□□ -1.3
CHMP4A-202ENST00000524955 BCORL1Q5H9F3 1711 aa6.94□□□□□ -1.3
CHMP4A-202ENST00000524955 DUOX2Q9NRD8 1548 aa6.94□□□□□ -1.3
CHMP4A-202ENST00000524955 ANKRD50Q9ULJ7 1429 aa6.93□□□□□ -1.3
CHMP4A-202ENST00000524955 AGLP35573 1532 aa6.93□□□□□ -1.3
CHMP4A-202ENST00000524955 FBXO31Q5XUX0 539 aaPredicted RBP6.93□□□□□ -1.3
CHMP4A-202ENST00000524955 TRIM52Q96A61 297 aa6.93□□□□□ -1.3
CHMP4A-202ENST00000524955 REREQ9P2R6 1566 aa6.93□□□□□ -1.3
CHMP4A-202ENST00000524955 WASHC2CQ9Y4E1 1318 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms