RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 NCOA1Q15788 1441 aa14.53□□□□□ -0.08
PUM1-213ENST00000524516 CFAP74Q9C0B2 1584 aa14.52□□□□□ -0.08
PUM1-213ENST00000524516 MAGI2Q86UL8 1455 aa14.51□□□□□ -0.09
PUM1-213ENST00000524516 SETD1BQ9UPS6 1966 aaKnown RBP14.51□□□□□ -0.09
PUM1-213ENST00000524516 ATP10BO94823 1461 aa14.5□□□□□ -0.09
PUM1-213ENST00000524516 FAM9AQ8IZU1 332 aaPredicted RBP14.49□□□□□ -0.09
PUM1-213ENST00000524516 HECW1Q76N89 1606 aa14.48□□□□□ -0.09
PUM1-213ENST00000524516 RAPGEF2Q9Y4G8 1499 aa14.47□□□□□ -0.09
PUM1-213ENST00000524516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
PUM1-213ENST00000524516 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
PUM1-213ENST00000524516 C9orf84Q5VXU9 1444 aa14.47□□□□□ -0.09
PUM1-213ENST00000524516 CAMSAP1Q5T5Y3 1602 aa14.46□□□□□ -0.09
PUM1-213ENST00000524516 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.1
PUM1-213ENST00000524516 TOM1O60784 492 aa14.45□□□□□ -0.1
PUM1-213ENST00000524516 C3P01024 1663 aa14.45□□□□□ -0.1
PUM1-213ENST00000524516 ATP10AO60312 1499 aa14.44□□□□□ -0.1
PUM1-213ENST00000524516 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
PUM1-213ENST00000524516 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
PUM1-213ENST00000524516 ESF1Q9H501 851 aaKnown RBP14.41□□□□□ -0.1
PUM1-213ENST00000524516 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
PUM1-213ENST00000524516 SUPT5HO00267 1087 aaKnown RBP14.37□□□□□ -0.11
PUM1-213ENST00000524516 RGS17Q9UGC6 210 aaPredicted RBP14.36□□□□□ -0.11
PUM1-213ENST00000524516 SCAPERQ9BY12 1400 aa14.35□□□□□ -0.11
PUM1-213ENST00000524516 RAPGEF6Q8TEU7 1601 aa14.33□□□□□ -0.11
PUM1-213ENST00000524516 SUPT6HQ7KZ85 1726 aaKnown RBP14.33□□□□□ -0.12
PUM1-213ENST00000524516 PKD2Q13563 968 aa14.33□□□□□ -0.12
PUM1-213ENST00000524516 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
PUM1-213ENST00000524516 SETD1AO15047 1707 aaKnown RBP14.32□□□□□ -0.12
PUM1-213ENST00000524516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.32□□□□□ -0.12
PUM1-213ENST00000524516 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
PUM1-213ENST00000524516 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
PUM1-213ENST00000524516 CPS1P31327 1500 aa14.31□□□□□ -0.12
PUM1-213ENST00000524516 MYT1LQ9UL68 1186 aa14.31□□□□□ -0.12
PUM1-213ENST00000524516 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
PUM1-213ENST00000524516 PLEKHD1A6NEE1 506 aa14.28□□□□□ -0.12
PUM1-213ENST00000524516 POTEAQ6S8J7 498 aa14.28□□□□□ -0.12
PUM1-213ENST00000524516 TCOF1Q13428 1488 aaKnown RBP14.27□□□□□ -0.12
PUM1-213ENST00000524516 NPATQ14207 1427 aa14.27□□□□□ -0.12
PUM1-213ENST00000524516 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
PUM1-213ENST00000524516 ZNF142P52746 1687 aaPredicted RBP14.26□□□□□ -0.13
PUM1-213ENST00000524516 DIP2CQ9Y2E4 1556 aa14.25□□□□□ -0.13
PUM1-213ENST00000524516 NUP153P49790 1475 aaKnown RBP14.25□□□□□ -0.13
PUM1-213ENST00000524516 MYO3AQ8NEV4 1616 aa14.24□□□□□ -0.13
PUM1-213ENST00000524516 AGLP35573 1532 aa14.24□□□□□ -0.13
PUM1-213ENST00000524516 ZNF518AQ6AHZ1 1483 aa14.24□□□□□ -0.13
PUM1-213ENST00000524516 REREQ9P2R6 1566 aa14.23□□□□□ -0.13
PUM1-213ENST00000524516 SHANK2Q9UPX8 1470 aa14.23□□□□□ -0.13
PUM1-213ENST00000524516 ALKQ9UM73 1620 aa14.23□□□□□ -0.13
PUM1-213ENST00000524516 CEP170BQ9Y4F5 1589 aaPredicted RBP14.22□□□□□ -0.13
PUM1-213ENST00000524516 MROH2AA6NES4 1674 aa14.2□□□□□ -0.14
PUM1-213ENST00000524516 ABCA6Q8N139 1617 aa14.19□□□□□ -0.14
PUM1-213ENST00000524516 PLCH2O75038 1416 aa14.19□□□□□ -0.14
PUM1-213ENST00000524516 KDM5CP41229 1560 aa14.18□□□□□ -0.14
PUM1-213ENST00000524516 UPF1Q92900 1129 aaKnown RBP eCLIP14.17□□□□□ -0.14
PUM1-213ENST00000524516 POLR1AO95602 1720 aaPredicted RBP14.16□□□□□ -0.14
PUM1-213ENST00000524516 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
PUM1-213ENST00000524516 RNF17Q9BXT8 1623 aaKnown RBP14.15□□□□□ -0.14
PUM1-213ENST00000524516 ZMYM3Q14202 1370 aa14.15□□□□□ -0.14
PUM1-213ENST00000524516 AFAP1Q8N556 730 aa14.15□□□□□ -0.14
PUM1-213ENST00000524516 MYO5CQ9NQX4 1742 aa14.15□□□□□ -0.14
PUM1-213ENST00000524516 SAMD9Q5K651 1589 aa14.13□□□□□ -0.15
PUM1-213ENST00000524516 VWDEQ8N2E2 1590 aa14.11□□□□□ -0.15
PUM1-213ENST00000524516 NEURL4Q96JN8 1562 aa14.11□□□□□ -0.15
PUM1-213ENST00000524516 MLH3Q9UHC1 1453 aa14.09□□□□□ -0.15
PUM1-213ENST00000524516 CLTCQ00610 1675 aaKnown RBP14.09□□□□□ -0.15
PUM1-213ENST00000524516 ARHGAP5Q13017 1502 aa14.09□□□□□ -0.15
PUM1-213ENST00000524516 DNMT1P26358 1616 aaKnown RBP14.08□□□□□ -0.15
PUM1-213ENST00000524516 A2ML1A8K2U0 1454 aa14.08□□□□□ -0.16
PUM1-213ENST00000524516 SRCAPQ6ZRS2 3230 aa14.07□□□□□ -0.16
PUM1-213ENST00000524516 SYNMO15061 1565 aa14.06□□□□□ -0.16
PUM1-213ENST00000524516 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
PUM1-213ENST00000524516 CDK13Q14004 1512 aaKnown RBP14.05□□□□□ -0.16
PUM1-213ENST00000524516 LRRC7Q96NW7 1537 aa14.05□□□□□ -0.16
PUM1-213ENST00000524516 RANGAP1P46060 587 aaPredicted RBP14.02□□□□□ -0.17
PUM1-213ENST00000524516 ANKLE2Q86XL3 938 aa14.02□□□□□ -0.17
PUM1-213ENST00000524516 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
PUM1-213ENST00000524516 KIDINS220Q9ULH0 1771 aa14.01□□□□□ -0.17
PUM1-213ENST00000524516 NPHP4O75161 1426 aaPredicted RBP14□□□□□ -0.17
PUM1-213ENST00000524516 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
PUM1-213ENST00000524516 KIF14Q15058 1648 aa13.99□□□□□ -0.17
PUM1-213ENST00000524516 IQGAP1P46940 1657 aa13.98□□□□□ -0.17
PUM1-213ENST00000524516 ITSN2Q9NZM3 1697 aa13.98□□□□□ -0.17
PUM1-213ENST00000524516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.97□□□□□ -0.17
PUM1-213ENST00000524516 ABCC1P33527 1531 aa13.96□□□□□ -0.17
PUM1-213ENST00000524516 DEPDC5O75140 1603 aa13.95□□□□□ -0.18
PUM1-213ENST00000524516 MED14O60244 1454 aa13.94□□□□□ -0.18
PUM1-213ENST00000524516 FAM135BQ49AJ0 1406 aa13.94□□□□□ -0.18
PUM1-213ENST00000524516 GGT6Q6P531 493 aa13.94□□□□□ -0.18
PUM1-213ENST00000524516 MEX3CQ5U5Q3 659 aaKnown RBP13.93□□□□□ -0.18
PUM1-213ENST00000524516 ZNF772Q68DY9 489 aaPredicted RBP13.93□□□□□ -0.18
PUM1-213ENST00000524516 TNRQ92752 1358 aa13.93□□□□□ -0.18
PUM1-213ENST00000524516 ROBO1Q9Y6N7 1651 aa13.91□□□□□ -0.18
PUM1-213ENST00000524516 CDC42BPBQ9Y5S2 1711 aa13.91□□□□□ -0.18
PUM1-213ENST00000524516 FOXD1Q16676 465 aa13.91□□□□□ -0.18
PUM1-213ENST00000524516 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
PUM1-213ENST00000524516 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
PUM1-213ENST00000524516 ATP1B4Q9UN42 357 aaPredicted RBP13.91□□□□□ -0.18
PUM1-213ENST00000524516 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.18
PUM1-213ENST00000524516 RXRBP28702 533 aa13.9□□□□□ -0.18
PUM1-213ENST00000524516 CDK11AQ9UQ88 783 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms