RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 FHOD3Q2V2M9 1422 aa14.07□□□□□ -0.16
CTNNA1-242ENST00000524292 KDM4FA0A1W2PPD8 638 aa14.06□□□□□ -0.16
CTNNA1-242ENST00000524292 NUP153P49790 1475 aaKnown RBP14.04□□□□□ -0.16
CTNNA1-242ENST00000524292 UBTFP17480 764 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-242ENST00000524292 ABCA9Q8IUA7 1624 aa14.02□□□□□ -0.16
CTNNA1-242ENST00000524292 ADGRL1O94910 1474 aa14.01□□□□□ -0.17
CTNNA1-242ENST00000524292 PHLDB1Q86UU1 1377 aa14□□□□□ -0.17
CTNNA1-242ENST00000524292 PLEKHD1A6NEE1 506 aa13.99□□□□□ -0.17
CTNNA1-242ENST00000524292 ARAP3Q8WWN8 1544 aa13.99□□□□□ -0.17
CTNNA1-242ENST00000524292 NEO1Q92859 1461 aa13.97□□□□□ -0.17
CTNNA1-242ENST00000524292 FMN1Q68DA7 1419 aa13.96□□□□□ -0.18
CTNNA1-242ENST00000524292 HECW1Q76N89 1606 aa13.93□□□□□ -0.18
CTNNA1-242ENST00000524292 ATP1B4Q9UN42 357 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-242ENST00000524292 ARHGAP35Q9NRY4 1499 aa13.92□□□□□ -0.18
CTNNA1-242ENST00000524292 CDK13Q14004 1512 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-242ENST00000524292 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
CTNNA1-242ENST00000524292 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-242ENST00000524292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.19
CTNNA1-242ENST00000524292 FANCAO15360 1455 aa13.89□□□□□ -0.19
CTNNA1-242ENST00000524292 RAPGEF3O95398 923 aa13.89□□□□□ -0.19
CTNNA1-242ENST00000524292 CDK11AQ9UQ88 783 aaPredicted RBP13.89□□□□□ -0.19
CTNNA1-242ENST00000524292 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
CTNNA1-242ENST00000524292 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
CTNNA1-242ENST00000524292 AKNAQ7Z591 1439 aa13.86□□□□□ -0.19
CTNNA1-242ENST00000524292 FRMPD1Q5SYB0 1578 aa13.85□□□□□ -0.19
CTNNA1-242ENST00000524292 CLIP1P30622 1438 aa13.84□□□□□ -0.19
CTNNA1-242ENST00000524292 PLCH2O75038 1416 aa13.82□□□□□ -0.2
CTNNA1-242ENST00000524292 ARHGEF40Q8TER5 1519 aa13.82□□□□□ -0.2
CTNNA1-242ENST00000524292 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
CTNNA1-242ENST00000524292 KIF14Q15058 1648 aa13.82□□□□□ -0.2
CTNNA1-242ENST00000524292 TROQ12816 1431 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-242ENST00000524292 RICTORQ6R327 1708 aa13.81□□□□□ -0.2
CTNNA1-242ENST00000524292 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
CTNNA1-242ENST00000524292 ZMYM4Q5VZL5 1548 aa13.8□□□□□ -0.2
CTNNA1-242ENST00000524292 MYO5CQ9NQX4 1742 aa13.79□□□□□ -0.2
CTNNA1-242ENST00000524292 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
CTNNA1-242ENST00000524292 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
CTNNA1-242ENST00000524292 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-242ENST00000524292 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
CTNNA1-242ENST00000524292 POGZQ7Z3K3 1410 aa13.78□□□□□ -0.2
CTNNA1-242ENST00000524292 MAGI2Q86UL8 1455 aa13.78□□□□□ -0.2
CTNNA1-242ENST00000524292 ZFYVE16Q7Z3T8 1539 aa13.77□□□□□ -0.21
CTNNA1-242ENST00000524292 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.21
CTNNA1-242ENST00000524292 ADAMTSL3P82987 1691 aa13.76□□□□□ -0.21
CTNNA1-242ENST00000524292 ARHGAP5Q13017 1502 aa13.76□□□□□ -0.21
CTNNA1-242ENST00000524292 FYCO1Q9BQS8 1478 aa13.76□□□□□ -0.21
CTNNA1-242ENST00000524292 BCORL1Q5H9F3 1711 aa13.76□□□□□ -0.21
CTNNA1-242ENST00000524292 PTPRMP28827 1452 aa13.75□□□□□ -0.21
CTNNA1-242ENST00000524292 LRRIQ1Q96JM4 1722 aa13.75□□□□□ -0.21
CTNNA1-242ENST00000524292 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
CTNNA1-242ENST00000524292 ZNF518AQ6AHZ1 1483 aa13.73□□□□□ -0.21
CTNNA1-242ENST00000524292 MADDQ8WXG6 1647 aa13.72□□□□□ -0.21
CTNNA1-242ENST00000524292 PREX2Q70Z35 1606 aa13.69□□□□□ -0.22
CTNNA1-242ENST00000524292 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
CTNNA1-242ENST00000524292 ATP10AO60312 1499 aa13.68□□□□□ -0.22
CTNNA1-242ENST00000524292 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
CTNNA1-242ENST00000524292 RIMS1Q86UR5 1692 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-242ENST00000524292 KDM5CP41229 1560 aa13.67□□□□□ -0.22
CTNNA1-242ENST00000524292 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-242ENST00000524292 CDC42BPBQ9Y5S2 1711 aa13.67□□□□□ -0.22
CTNNA1-242ENST00000524292 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-242ENST00000524292 ABCC1P33527 1531 aa13.65□□□□□ -0.22
CTNNA1-242ENST00000524292 MLECQ14165 292 aa13.65□□□□□ -0.22
CTNNA1-242ENST00000524292 AFAP1Q8N556 730 aa13.65□□□□□ -0.22
CTNNA1-242ENST00000524292 SIGLEC1Q9BZZ2 1709 aa13.64□□□□□ -0.23
CTNNA1-242ENST00000524292 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
CTNNA1-242ENST00000524292 CEP162Q5TB80 1403 aa13.63□□□□□ -0.23
CTNNA1-242ENST00000524292 FER1L4A9Z1Z3 1794 aa13.63□□□□□ -0.23
CTNNA1-242ENST00000524292 MLH3Q9UHC1 1453 aa13.62□□□□□ -0.23
CTNNA1-242ENST00000524292 CDC42BPAQ5VT25 1732 aa13.62□□□□□ -0.23
CTNNA1-242ENST00000524292 ITSN2Q9NZM3 1697 aa13.62□□□□□ -0.23
CTNNA1-242ENST00000524292 ARHGEF12Q9NZN5 1544 aa13.61□□□□□ -0.23
CTNNA1-242ENST00000524292 ZNF777Q9ULD5 760 aaPredicted RBP13.61□□□□□ -0.23
CTNNA1-242ENST00000524292 TRAPPC8Q9Y2L5 1435 aa13.61□□□□□ -0.23
CTNNA1-242ENST00000524292 DIP2CQ9Y2E4 1556 aa13.61□□□□□ -0.23
CTNNA1-242ENST00000524292 LMTK3Q96Q04 1460 aa13.61□□□□□ -0.23
CTNNA1-242ENST00000524292 CCNB3Q8WWL7 1395 aa13.6□□□□□ -0.23
CTNNA1-242ENST00000524292 REREQ9P2R6 1566 aa13.6□□□□□ -0.23
CTNNA1-242ENST00000524292 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-242ENST00000524292 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
CTNNA1-242ENST00000524292 ABCA6Q8N139 1617 aa13.58□□□□□ -0.24
CTNNA1-242ENST00000524292 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
CTNNA1-242ENST00000524292 EHBP1L1Q8N3D4 1523 aa13.58□□□□□ -0.24
CTNNA1-242ENST00000524292 SYCP2Q9BX26 1530 aa13.58□□□□□ -0.24
CTNNA1-242ENST00000524292 SAMD9LQ8IVG5 1584 aa13.58□□□□□ -0.24
CTNNA1-242ENST00000524292 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-242ENST00000524292 SPAG9O60271 1321 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-242ENST00000524292 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
CTNNA1-242ENST00000524292 AGLP35573 1532 aa13.55□□□□□ -0.24
CTNNA1-242ENST00000524292 ILDR1Q86SU0 546 aaPredicted RBP13.55□□□□□ -0.24
CTNNA1-242ENST00000524292 KIDINS220Q9ULH0 1771 aa13.54□□□□□ -0.24
CTNNA1-242ENST00000524292 HNRNPMP52272 730 aaKnown RBP eCLIP13.53□□□□□ -0.24
CTNNA1-242ENST00000524292 HSPA2P54652 639 aa13.52□□□□□ -0.25
CTNNA1-242ENST00000524292 TIAM1Q13009 1591 aa13.52□□□□□ -0.25
CTNNA1-242ENST00000524292 ATP7AQ04656 1500 aa13.51□□□□□ -0.25
CTNNA1-242ENST00000524292 PREX1Q8TCU6 1659 aa13.5□□□□□ -0.25
CTNNA1-242ENST00000524292 CNTLNQ9NXG0 1405 aa13.5□□□□□ -0.25
CTNNA1-242ENST00000524292 CEBPAP49715 358 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-242ENST00000524292 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
CTNNA1-242ENST00000524292 SPDYE2BA6NHP3 402 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms