RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 DENND4BO75064 1496 aaPredicted RBP18.95■□□□□ 0.62
CLN8-207ENST00000524258 LRRC9Q6ZRR7 1453 aa18.95■□□□□ 0.62
CLN8-207ENST00000524258 CFAP74Q9C0B2 1584 aa18.94■□□□□ 0.62
CLN8-207ENST00000524258 SCAPERQ9BY12 1400 aa18.94■□□□□ 0.62
CLN8-207ENST00000524258 PREX2Q70Z35 1606 aa18.93■□□□□ 0.62
CLN8-207ENST00000524258 ADGRL1O94910 1474 aa18.92■□□□□ 0.62
CLN8-207ENST00000524258 CDC42BPAQ5VT25 1732 aa18.92■□□□□ 0.62
CLN8-207ENST00000524258 ARHGAP5Q13017 1502 aa18.92■□□□□ 0.62
CLN8-207ENST00000524258 ARHGEF12Q9NZN5 1544 aa18.91■□□□□ 0.62
CLN8-207ENST00000524258 RICTORQ6R327 1708 aa18.91■□□□□ 0.62
CLN8-207ENST00000524258 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
CLN8-207ENST00000524258 POGZQ7Z3K3 1410 aa18.9■□□□□ 0.62
CLN8-207ENST00000524258 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
CLN8-207ENST00000524258 ZMYM4Q5VZL5 1548 aa18.87■□□□□ 0.61
CLN8-207ENST00000524258 ABCC1P33527 1531 aa18.86■□□□□ 0.61
CLN8-207ENST00000524258 AFAP1Q8N556 730 aa18.86■□□□□ 0.61
CLN8-207ENST00000524258 TRAPPC8Q9Y2L5 1435 aa18.85■□□□□ 0.61
CLN8-207ENST00000524258 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
CLN8-207ENST00000524258 SAMD9LQ8IVG5 1584 aa18.85■□□□□ 0.61
CLN8-207ENST00000524258 ZNF644Q9H582 1327 aaPredicted RBP18.84■□□□□ 0.61
CLN8-207ENST00000524258 KDM4FA0A1W2PPD8 638 aa18.84■□□□□ 0.61
CLN8-207ENST00000524258 SUPT6HQ7KZ85 1726 aaKnown RBP18.83■□□□□ 0.61
CLN8-207ENST00000524258 YEATS2Q9ULM3 1422 aa18.83■□□□□ 0.6
CLN8-207ENST00000524258 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
CLN8-207ENST00000524258 KDM5CP41229 1560 aa18.82■□□□□ 0.6
CLN8-207ENST00000524258 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
CLN8-207ENST00000524258 ZNF518AQ6AHZ1 1483 aa18.81■□□□□ 0.6
CLN8-207ENST00000524258 HNRNPMP52272 730 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLN8-207ENST00000524258 ZNF777Q9ULD5 760 aaPredicted RBP18.8■□□□□ 0.6
CLN8-207ENST00000524258 MBD5Q9P267 1494 aa18.79■□□□□ 0.6
CLN8-207ENST00000524258 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
CLN8-207ENST00000524258 ITSN2Q9NZM3 1697 aa18.78■□□□□ 0.6
CLN8-207ENST00000524258 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.6
CLN8-207ENST00000524258 APLP2Q06481 763 aa18.77■□□□□ 0.6
CLN8-207ENST00000524258 SYCP2Q9BX26 1530 aa18.77■□□□□ 0.6
CLN8-207ENST00000524258 PLEKHH2Q8IVE3 1493 aa18.77■□□□□ 0.59
CLN8-207ENST00000524258 ZFYVE16Q7Z3T8 1539 aa18.75■□□□□ 0.59
CLN8-207ENST00000524258 MYOM3Q5VTT5 1437 aa18.74■□□□□ 0.59
CLN8-207ENST00000524258 MIA2Q96PC5 1412 aa18.73■□□□□ 0.59
CLN8-207ENST00000524258 ATP10AO60312 1499 aa18.72■□□□□ 0.59
CLN8-207ENST00000524258 SIGLEC1Q9BZZ2 1709 aa18.72■□□□□ 0.59
CLN8-207ENST00000524258 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
CLN8-207ENST00000524258 HECW2Q9P2P5 1572 aa18.7■□□□□ 0.58
CLN8-207ENST00000524258 KIDINS220Q9ULH0 1771 aa18.7■□□□□ 0.58
CLN8-207ENST00000524258 DIP2CQ9Y2E4 1556 aa18.69■□□□□ 0.58
CLN8-207ENST00000524258 SPAG9O60271 1321 aaKnown RBP18.68■□□□□ 0.58
CLN8-207ENST00000524258 ABCA6Q8N139 1617 aa18.67■□□□□ 0.58
CLN8-207ENST00000524258 C9orf84Q5VXU9 1444 aa18.67■□□□□ 0.58
CLN8-207ENST00000524258 REREQ9P2R6 1566 aa18.65■□□□□ 0.58
CLN8-207ENST00000524258 INO80Q9ULG1 1556 aaPredicted RBP18.65■□□□□ 0.58
CLN8-207ENST00000524258 RSPH4AQ5TD94 716 aa18.65■□□□□ 0.58
CLN8-207ENST00000524258 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
CLN8-207ENST00000524258 ARHGEF5Q12774 1597 aa18.64■□□□□ 0.58
CLN8-207ENST00000524258 ADAMTSL3P82987 1691 aa18.64■□□□□ 0.57
CLN8-207ENST00000524258 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
CLN8-207ENST00000524258 TCOF1Q13428 1488 aaKnown RBP18.64■□□□□ 0.57
CLN8-207ENST00000524258 CCDC141Q6ZP82 1450 aa18.64■□□□□ 0.57
CLN8-207ENST00000524258 ATP7AQ04656 1500 aa18.63■□□□□ 0.57
CLN8-207ENST00000524258 BCORL1Q5H9F3 1711 aa18.63■□□□□ 0.57
CLN8-207ENST00000524258 AGLP35573 1532 aa18.61■□□□□ 0.57
CLN8-207ENST00000524258 ARID4BQ4LE39 1312 aaPredicted RBP18.61■□□□□ 0.57
CLN8-207ENST00000524258 PPARGC1BQ86YN6 1023 aaKnown RBP18.59■□□□□ 0.57
CLN8-207ENST00000524258 MYT1LQ9UL68 1186 aa18.59■□□□□ 0.57
CLN8-207ENST00000524258 PTPN23Q9H3S7 1636 aa18.59■□□□□ 0.57
CLN8-207ENST00000524258 ABCC5O15440 1437 aa18.58■□□□□ 0.57
CLN8-207ENST00000524258 AEBP2Q6ZN18 517 aaPredicted RBP18.58■□□□□ 0.56
CLN8-207ENST00000524258 PLXNC1O60486 1568 aa18.57■□□□□ 0.56
CLN8-207ENST00000524258 A2MP01023 1474 aa18.56■□□□□ 0.56
CLN8-207ENST00000524258 MAST1Q9Y2H9 1570 aa18.55■□□□□ 0.56
CLN8-207ENST00000524258 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
CLN8-207ENST00000524258 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
CLN8-207ENST00000524258 TSPY4P0CV99 314 aa18.54■□□□□ 0.56
CLN8-207ENST00000524258 TSPY10P0CW01 314 aa18.54■□□□□ 0.56
CLN8-207ENST00000524258 MLECQ14165 292 aa18.54■□□□□ 0.56
CLN8-207ENST00000524258 PTPRMP28827 1452 aa18.53■□□□□ 0.56
CLN8-207ENST00000524258 DAPK1P53355 1430 aa18.52■□□□□ 0.56
CLN8-207ENST00000524258 SHANK2Q9UPX8 1470 aa18.5■□□□□ 0.55
CLN8-207ENST00000524258 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
CLN8-207ENST00000524258 ADGBQ8N7X0 1667 aa18.49■□□□□ 0.55
CLN8-207ENST00000524258 PTPRKQ15262 1439 aa18.48■□□□□ 0.55
CLN8-207ENST00000524258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLN8-207ENST00000524258 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
CLN8-207ENST00000524258 FAM50AQ14320 339 aaKnown RBP18.45■□□□□ 0.54
CLN8-207ENST00000524258 RIMS1Q86UR5 1692 aaKnown RBP18.44■□□□□ 0.54
CLN8-207ENST00000524258 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
CLN8-207ENST00000524258 NCOA1Q15788 1441 aa18.43■□□□□ 0.54
CLN8-207ENST00000524258 ADGRL2O95490 1459 aa18.43■□□□□ 0.54
CLN8-207ENST00000524258 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
CLN8-207ENST00000524258 FER1L4A9Z1Z3 1794 aa18.42■□□□□ 0.54
CLN8-207ENST00000524258 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
CLN8-207ENST00000524258 KIF3BO15066 747 aa18.41■□□□□ 0.54
CLN8-207ENST00000524258 RRP7BPQ9NSQ0 103 aa18.41■□□□□ 0.54
CLN8-207ENST00000524258 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
CLN8-207ENST00000524258 CEBPAP49715 358 aaPredicted RBP18.4■□□□□ 0.54
CLN8-207ENST00000524258 GGT6Q6P531 493 aa18.4■□□□□ 0.54
CLN8-207ENST00000524258 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.54
CLN8-207ENST00000524258 ANKRD30AQ9BXX3 1397 aa18.38■□□□□ 0.53
CLN8-207ENST00000524258 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
CLN8-207ENST00000524258 ZMYM3Q14202 1370 aa18.36■□□□□ 0.53
CLN8-207ENST00000524258 ERBINQ96RT1 1412 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms