RNA–Protein interactions for RNA: ENST00000523315.1

EBF1-209, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 490 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-209ENST00000523315 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
EBF1-209ENST00000523315 PLCH2O75038 1416 aa22.06■■□□□ 1.12
EBF1-209ENST00000523315 ARID4BQ4LE39 1312 aaPredicted RBP22.05■■□□□ 1.12
EBF1-209ENST00000523315 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
EBF1-209ENST00000523315 SUPT6HQ7KZ85 1726 aaKnown RBP22.04■■□□□ 1.12
EBF1-209ENST00000523315 SCAPERQ9BY12 1400 aa22.01■■□□□ 1.11
EBF1-209ENST00000523315 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
EBF1-209ENST00000523315 RICTORQ6R327 1708 aa22■■□□□ 1.11
EBF1-209ENST00000523315 EFCAB2Q5VUJ9 269 aa21.99■■□□□ 1.11
EBF1-209ENST00000523315 ARHGAP5Q13017 1502 aa21.99■■□□□ 1.11
EBF1-209ENST00000523315 PREX2Q70Z35 1606 aa21.98■■□□□ 1.11
EBF1-209ENST00000523315 YEATS2Q9ULM3 1422 aa21.97■■□□□ 1.11
EBF1-209ENST00000523315 NCOA2Q15596 1464 aa21.97■■□□□ 1.11
EBF1-209ENST00000523315 ARHGEF40Q8TER5 1519 aa21.96■■□□□ 1.11
EBF1-209ENST00000523315 ITSN2Q9NZM3 1697 aa21.96■■□□□ 1.11
EBF1-209ENST00000523315 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
EBF1-209ENST00000523315 KANK4Q5T7N3 995 aaPredicted RBP21.94■■□□□ 1.1
EBF1-209ENST00000523315 CDC42BPAQ5VT25 1732 aa21.94■■□□□ 1.1
EBF1-209ENST00000523315 ZMYM4Q5VZL5 1548 aa21.93■■□□□ 1.1
EBF1-209ENST00000523315 ZFYVE16Q7Z3T8 1539 aa21.93■■□□□ 1.1
EBF1-209ENST00000523315 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
EBF1-209ENST00000523315 GPATCH8Q9UKJ3 1502 aaKnown RBP21.92■■□□□ 1.1
EBF1-209ENST00000523315 ADAMTSL3P82987 1691 aa21.91■■□□□ 1.1
EBF1-209ENST00000523315 PTPRMP28827 1452 aa21.9■■□□□ 1.1
EBF1-209ENST00000523315 CDC42BPBQ9Y5S2 1711 aa21.9■■□□□ 1.1
EBF1-209ENST00000523315 BCORL1Q5H9F3 1711 aa21.89■■□□□ 1.1
EBF1-209ENST00000523315 MLECQ14165 292 aa21.89■■□□□ 1.09
EBF1-209ENST00000523315 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
EBF1-209ENST00000523315 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.09
EBF1-209ENST00000523315 MADDQ8WXG6 1647 aa21.88■■□□□ 1.09
EBF1-209ENST00000523315 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
EBF1-209ENST00000523315 MAGI2Q86UL8 1455 aa21.87■■□□□ 1.09
EBF1-209ENST00000523315 SIGLEC1Q9BZZ2 1709 aa21.86■■□□□ 1.09
EBF1-209ENST00000523315 PLEKHH2Q8IVE3 1493 aa21.85■■□□□ 1.09
EBF1-209ENST00000523315 MYOM3Q5VTT5 1437 aa21.84■■□□□ 1.09
EBF1-209ENST00000523315 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
EBF1-209ENST00000523315 ZNF777Q9ULD5 760 aaPredicted RBP21.84■■□□□ 1.09
EBF1-209ENST00000523315 ABCC1P33527 1531 aa21.82■■□□□ 1.08
EBF1-209ENST00000523315 ATP10AO60312 1499 aa21.81■■□□□ 1.08
EBF1-209ENST00000523315 ZNF518AQ6AHZ1 1483 aa21.81■■□□□ 1.08
EBF1-209ENST00000523315 SAMD9LQ8IVG5 1584 aa21.81■■□□□ 1.08
EBF1-209ENST00000523315 ARHGEF12Q9NZN5 1544 aa21.8■■□□□ 1.08
EBF1-209ENST00000523315 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
EBF1-209ENST00000523315 TRAPPC8Q9Y2L5 1435 aa21.8■■□□□ 1.08
EBF1-209ENST00000523315 RIMS1Q86UR5 1692 aaKnown RBP21.79■■□□□ 1.08
EBF1-209ENST00000523315 C9orf84Q5VXU9 1444 aa21.78■■□□□ 1.08
EBF1-209ENST00000523315 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.08
EBF1-209ENST00000523315 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.07
EBF1-209ENST00000523315 KDM5CP41229 1560 aa21.76■■□□□ 1.07
EBF1-209ENST00000523315 KIAA1107Q9UPP5 1409 aa21.76■■□□□ 1.07
EBF1-209ENST00000523315 FGD6Q6ZV73 1430 aa21.73■■□□□ 1.07
EBF1-209ENST00000523315 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
EBF1-209ENST00000523315 HNRNPMP52272 730 aaKnown RBP eCLIP21.71■■□□□ 1.07
EBF1-209ENST00000523315 DIP2CQ9Y2E4 1556 aa21.7■■□□□ 1.06
EBF1-209ENST00000523315 PTPN23Q9H3S7 1636 aa21.7■■□□□ 1.06
EBF1-209ENST00000523315 ZNF644Q9H582 1327 aaPredicted RBP21.7■■□□□ 1.06
EBF1-209ENST00000523315 MLH3Q9UHC1 1453 aa21.7■■□□□ 1.06
EBF1-209ENST00000523315 ABCA6Q8N139 1617 aa21.69■■□□□ 1.06
EBF1-209ENST00000523315 CCDC141Q6ZP82 1450 aa21.67■■□□□ 1.06
EBF1-209ENST00000523315 LMTK3Q96Q04 1460 aa21.67■■□□□ 1.06
EBF1-209ENST00000523315 CEBPAP49715 358 aaPredicted RBP21.67■■□□□ 1.06
EBF1-209ENST00000523315 ARHGEF5Q12774 1597 aa21.66■■□□□ 1.06
EBF1-209ENST00000523315 HSPA2P54652 639 aa21.66■■□□□ 1.06
EBF1-209ENST00000523315 RSPH4AQ5TD94 716 aa21.66■■□□□ 1.06
EBF1-209ENST00000523315 FER1L4A9Z1Z3 1794 aa21.66■■□□□ 1.06
EBF1-209ENST00000523315 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
EBF1-209ENST00000523315 MBD5Q9P267 1494 aa21.64■■□□□ 1.06
EBF1-209ENST00000523315 SPAG9O60271 1321 aaKnown RBP21.63■■□□□ 1.05
EBF1-209ENST00000523315 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
EBF1-209ENST00000523315 KIDINS220Q9ULH0 1771 aa21.61■■□□□ 1.05
EBF1-209ENST00000523315 FAM50AQ14320 339 aaKnown RBP21.61■■□□□ 1.05
EBF1-209ENST00000523315 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
EBF1-209ENST00000523315 REREQ9P2R6 1566 aa21.59■■□□□ 1.05
EBF1-209ENST00000523315 INO80Q9ULG1 1556 aaPredicted RBP21.58■■□□□ 1.05
EBF1-209ENST00000523315 TSPY4P0CV99 314 aa21.58■■□□□ 1.05
EBF1-209ENST00000523315 TSPY10P0CW01 314 aa21.58■■□□□ 1.05
EBF1-209ENST00000523315 DNMT1P26358 1616 aaKnown RBP21.56■■□□□ 1.04
EBF1-209ENST00000523315 RTEL1-TNFRSF6BF6WH68 1400 aa21.55■■□□□ 1.04
EBF1-209ENST00000523315 AGLP35573 1532 aa21.55■■□□□ 1.04
EBF1-209ENST00000523315 SHANK2Q9UPX8 1470 aa21.55■■□□□ 1.04
EBF1-209ENST00000523315 CROCC2H7BZ55 1655 aa21.54■■□□□ 1.04
EBF1-209ENST00000523315 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
EBF1-209ENST00000523315 DAPK1P53355 1430 aa21.54■■□□□ 1.04
EBF1-209ENST00000523315 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
EBF1-209ENST00000523315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.53■■□□□ 1.04
EBF1-209ENST00000523315 RRBP1Q9P2E9 1410 aaKnown RBP21.53■■□□□ 1.04
EBF1-209ENST00000523315 ABCC5O15440 1437 aa21.51■■□□□ 1.03
EBF1-209ENST00000523315 ADGBQ8N7X0 1667 aa21.49■■□□□ 1.03
EBF1-209ENST00000523315 A2MP01023 1474 aa21.48■■□□□ 1.03
EBF1-209ENST00000523315 PLXNC1O60486 1568 aa21.47■■□□□ 1.03
EBF1-209ENST00000523315 GGT6Q6P531 493 aa21.45■■□□□ 1.02
EBF1-209ENST00000523315 C3P01024 1663 aa21.44■■□□□ 1.02
EBF1-209ENST00000523315 ANKRD30AQ9BXX3 1397 aa21.44■■□□□ 1.02
EBF1-209ENST00000523315 UHRF1BP1Q6BDS2 1440 aa21.44■■□□□ 1.02
EBF1-209ENST00000523315 PREX1Q8TCU6 1659 aa21.43■■□□□ 1.02
EBF1-209ENST00000523315 CNTLNQ9NXG0 1405 aa21.42■■□□□ 1.02
EBF1-209ENST00000523315 ITGAEP38570 1179 aa21.41■■□□□ 1.02
EBF1-209ENST00000523315 ADGRL2O95490 1459 aa21.4■■□□□ 1.02
EBF1-209ENST00000523315 ZMYM3Q14202 1370 aa21.4■■□□□ 1.02
EBF1-209ENST00000523315 KIF15Q9NS87 1388 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms